miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00724;mir-282;AAPU01011488.1/130621-130527 7230:Drosophila
mojavensis
Length = 95
Score = 180 bits (91), Expect = 2e-45
Identities = 91/91 (100%)
Strand = Plus / Plus
Query: 1 tttccttataaatctagcctctactaggctttgtctgtgcatttgatataagatcagaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 tttccttataaatctagcctctactaggctttgtctgtgcatttgatataagatcagaca 62
Query: 61 tagcctatgagaggttaggtgtagcaagggg 91
|||||||||||||||||||||||||||||||
Sbjct: 63 tagcctatgagaggttaggtgtagcaagggg 93
>RF00724;mir-282;AE014296.4/3251022-3251116 7227:Drosophila
melanogaster (fruit fly)
Length = 95
Score = 113 bits (57), Expect = 4e-25
Identities = 81/89 (91%)
Strand = Plus / Plus
Query: 1 tttccttataaatctagcctctactaggctttgtctgtgcatttgatataagatcagaca 60
||||||| ||||||||||||||||||||||||||||||||||| || | |||||||||
Sbjct: 3 tttccttctaaatctagcctctactaggctttgtctgtgcattcgaaagccgatcagaca 62
Query: 61 tagcctatgagaggttaggtgtagcaagg 89
|||||||| |||||||||||||| |||||
Sbjct: 63 tagcctataagaggttaggtgtaccaagg 91
>RF00724;mir-282;AAQB01009652.1/11236-11325 7260:Drosophila
willistoni
Length = 90
Score = 107 bits (54), Expect = 2e-23
Identities = 80/87 (91%), Gaps = 5/87 (5%)
Strand = Plus / Plus
Query: 3 tccttataaatctagcctctactaggctttgtctgtgcatttgatataagatcagacata 62
||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 5 tccttataaatctagcctctactaggctttgtctgtgcatttg-gat----tcagacata 59
Query: 63 gcctatgagaggttaggtgtagcaagg 89
||||||||||||||||||||| |||||
Sbjct: 60 gcctatgagaggttaggtgtaccaagg 86
>RF00724;mir-282;AAPT01020493.1/70677-70773 7222:Drosophila
grimshawi
Length = 97
Score = 97.6 bits (49), Expect = 2e-20
Identities = 76/84 (90%), Gaps = 2/84 (2%)
Strand = Plus / Plus
Query: 2 ttccttataaatctagcctctactaggctttgtctgtgca--tttgatataagatcagac 59
|||||||||||||||||||||||||||||||||||||||| ||| || |||||||
Sbjct: 4 ttccttataaatctagcctctactaggctttgtctgtgcactttttcaattcaatcagac 63
Query: 60 atagcctatgagaggttaggtgta 83
||||||||||||||||||||||||
Sbjct: 64 atagcctatgagaggttaggtgta 87
>RF00724;mir-282;AAGE02015805.1/19430-19533 7159:Aedes aegypti
(yellow fever mosquito)
Length = 104
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 11 aatctagcctctactaggctttgtctgt 38
|||||||||||| |||||||||||||||
Sbjct: 13 aatctagcctctcctaggctttgtctgt 40
>RF00724;mir-282;ABKP02026817.1/6213-6306 377271:Anopheles gambiae
M
Length = 94
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 11 aatctagcctctactaggctttgtctgt 38
|||||||||||| |||||||||||||||
Sbjct: 13 aatctagcctcttctaggctttgtctgt 40
>RF00724;mir-282;AAJJ01000207.1/45613-45525 7070:Tribolium
castaneum (red flour beetle)
Length = 89
Score = 46.1 bits (23), Expect = 8e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 15 tagcctctactaggctttgtctgtgcatttg 45
|||||||| |||||||||||||||| |||||
Sbjct: 17 tagcctctcctaggctttgtctgtgaatttg 47
