miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01059;mir-598;AACY022326383.1/293-195 408172:marine metagenome
Length = 99
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 140 tatcaccatcatcttcatcatcatcc 165
||||||||||||| ||||||||||||
Sbjct: 47 tatcaccatcatcatcatcatcatcc 22
>RF01059;mir-598;AASC02013047.1/6259-6341 6500:Aplysia californica
(California sea hare)
Length = 83
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 141 atcaccatcatcttcatcatca 162
||||||||||||||||||||||
Sbjct: 22 atcaccatcatcttcatcatca 1
>RF01059;mir-598;AAGJ02143518.1/11308-11208 7668:Strongylocentrotus
purpuratus
Length = 101
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 139 atatcaccatcatcttcatcatcatc 164
|||||| |||||||||||||||||||
Sbjct: 42 atatcatcatcatcttcatcatcatc 17
>RF01059;mir-598;ABRM01004513.1/27069-27142 6085:Hydra
magnipapillata
Length = 74
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 139 atatcaccatcatcttcatcatcatc 164
|||||||||||||| |||||||||||
Sbjct: 42 atatcaccatcatcatcatcatcatc 17
>RF01059;mir-598;AAPN01000540.1/28003-27953 9258:Ornithorhynchus
anatinus (platypus)
Length = 51
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 141 atcaccatcatcttcatcatca 162
||||||||||||||||||||||
Sbjct: 25 atcaccatcatcttcatcatca 4
>RF01059;mir-598;AAFI02000005.1/2101922-2101826 352472:Dictyostelium
discoideum AX4
Length = 97
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 143 caccatcatcttcatcatcatc 164
||||||||||||||||||||||
Sbjct: 75 caccatcatcttcatcatcatc 96
