miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00854;mir-5;AANI01014795.1/39532-39603 7244:Drosophila virilis
Length = 72
Score = 125 bits (63), Expect = 8e-29
Identities = 69/71 (97%)
Strand = Plus / Plus
Query: 2 ctaaaaggaacgatcgttgtgatatgcgttaattcaccgttacatatcacagtgattttc 61
|||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct: 2 ctaaaaggaacgatcgttgtgatatgcgttcattaaccgttacatatcacagtgattttc 61
Query: 62 ctttatagcgc 72
|||||||||||
Sbjct: 62 ctttatagcgc 72
>RF00854;mir-5;AASS01023484.1/3619-3686 7240:Drosophila simulans
Length = 68
Score = 60.0 bits (30), Expect = 4e-09
Identities = 60/68 (88%), Gaps = 4/68 (5%)
Strand = Plus / Plus
Query: 1 gctaaaaggaacgatcgttgtgatatgcgttaattcaccgttacatatcacagtgatttt 60
||||||||||||||||||||||||||| ||| ||| | ||||||||||||||||||
Sbjct: 1 gctaaaaggaacgatcgttgtgatatgagtt-gttccc---aacatatcacagtgatttt 56
Query: 61 cctttata 68
||||||||
Sbjct: 57 cctttata 64
