miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00661;mir-31;AAIZ01004624.1/839-930 7234:Drosophila persimilis
Length = 92
Score = 165 bits (83), Expect = 1e-40
Identities = 83/83 (100%)
Strand = Plus / Plus
Query: 1 aatttggcaagatgtcggaatagctgagagcaaaaagaagatgatttgaaatgcggctat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 aatttggcaagatgtcggaatagctgagagcaaaaagaagatgatttgaaatgcggctat 69
Query: 61 gcctcatctagtcaattgcattc 83
|||||||||||||||||||||||
Sbjct: 70 gcctcatctagtcaattgcattc 92
>RF00661;mir-31;AAPQ01005997.1/12172-12293 7220:Drosophila erecta
Length = 122
Score = 67.9 bits (34), Expect = 2e-11
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 45 tttgaaatgcggctatgcctcatctagtcaattgcatt 82
||||||| ||||||||||||||||||||||||||||||
Sbjct: 84 tttgaaaagcggctatgcctcatctagtcaattgcatt 121
Score = 63.9 bits (32), Expect = 3e-10
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 1 aatttggcaagatgtcggaatagctgagagca 32
||||||||||||||||||||||||||||||||
Sbjct: 10 aatttggcaagatgtcggaatagctgagagca 41
>RF00661;mir-31;AANI01013847.1/25203-25083 7244:Drosophila virilis
Length = 121
Score = 65.9 bits (33), Expect = 8e-11
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 1 aatttggcaagatgtcggaatagctgagagcaaaaag 37
|||||||||||||||||||||||||||||||| ||||
Sbjct: 10 aatttggcaagatgtcggaatagctgagagcacaaag 46
Score = 61.9 bits (31), Expect = 1e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 53 gcggctatgcctcatctagtcaattgcattc 83
|||||||||||||||||||||||||||||||
Sbjct: 91 gcggctatgcctcatctagtcaattgcattc 121
>RF00661;mir-31;AAPP01016551.1/245474-245363 7217:Drosophila
ananassae
Length = 112
Score = 63.9 bits (32), Expect = 3e-10
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 1 aatttggcaagatgtcggaatagctgagagca 32
||||||||||||||||||||||||||||||||
Sbjct: 10 aatttggcaagatgtcggaatagctgagagca 41
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 53 gcggctatgcctcatctagtcaattgcatt 82
||||||||||||||||||||||||| ||||
Sbjct: 82 gcggctatgcctcatctagtcaattacatt 111
>RF00661;mir-31;AAPU01009413.1/121752-121873 7230:Drosophila
mojavensis
Length = 122
Score = 63.9 bits (32), Expect = 3e-10
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 1 aatttggcaagatgtcggaatagctgagagca 32
||||||||||||||||||||||||||||||||
Sbjct: 10 aatttggcaagatgtcggaatagctgagagca 41
Score = 61.9 bits (31), Expect = 1e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 53 gcggctatgcctcatctagtcaattgcattc 83
|||||||||||||||||||||||||||||||
Sbjct: 92 gcggctatgcctcatctagtcaattgcattc 122
>RF00661;mir-31;AAPT01021280.1/172982-172862 7222:Drosophila
grimshawi
Length = 121
Score = 61.9 bits (31), Expect = 1e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 53 gcggctatgcctcatctagtcaattgcattc 83
|||||||||||||||||||||||||||||||
Sbjct: 91 gcggctatgcctcatctagtcaattgcattc 121
Score = 56.0 bits (28), Expect = 8e-08
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 1 aatttggcaagatgtcggaatagctgagagca 32
||||||||||||||||||||||||||| ||||
Sbjct: 10 aatttggcaagatgtcggaatagctgacagca 41
>RF00661;mir-31;AAQB01010380.1/1470-1604 7260:Drosophila willistoni
Length = 135
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 54 cggctatgcctcatctagtcaattgcatt 82
|||||||||||||||||||||||||||||
Sbjct: 106 cggctatgcctcatctagtcaattgcatt 134
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 2 atttggcaagatgtcggaatagctga 27
||||||||||||||||||||||||||
Sbjct: 11 atttggcaagatgtcggaatagctga 36
