miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00726;mir-87;AADE01000150.1/47415-47513 46245:Drosophila
pseudoobscura pseudoobscura
Length = 99
Score = 194 bits (98), Expect = 1e-49
Identities = 98/98 (100%)
Strand = Plus / Plus
Query: 1 catatttcattcgcgcctgtatcttgctgaaccgtagccataatggtctttcatcccggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 catatttcattcgcgcctgtatcttgctgaaccgtagccataatggtctttcatcccggt 61
Query: 61 tgagcaaaatttcaggtgtgtgagaaatttgttaagca 98
||||||||||||||||||||||||||||||||||||||
Sbjct: 62 tgagcaaaatttcaggtgtgtgagaaatttgttaagca 99
>RF00726;mir-87;AASW01042897.1/1205-1302 7240:Drosophila simulans
Length = 98
Score = 93.7 bits (47), Expect = 4e-19
Identities = 84/95 (88%), Gaps = 1/95 (1%)
Strand = Plus / Plus
Query: 4 atttcattcgcgcctgtatcttgctgaaccgtagccataatggtctttcatcccggttga 63
||||||||||||||||||||||||||||||| ||||| |||| | |||| ||||||
Sbjct: 5 atttcattcgcgcctgtatcttgctgaaccgctgccattatggccaacgatcc-ggttga 63
Query: 64 gcaaaatttcaggtgtgtgagaaatttgttaagca 98
||||||||||||||||||||||||| |||| ||||
Sbjct: 64 gcaaaatttcaggtgtgtgagaaatgtgtttagca 98
>RF00726;mir-87;AAPP01015726.1/103266-103169 7217:Drosophila
ananassae
Length = 98
Score = 91.7 bits (46), Expect = 2e-18
Identities = 86/98 (87%), Gaps = 1/98 (1%)
Strand = Plus / Plus
Query: 1 catatttcattcgcgcctgtatcttgctgaaccgtagccataatggtctttcatcccggt 60
||||||||||||||||||||||||||||||||||| || |||| |||| |||
Sbjct: 2 catatttcattcgcgcctgtatcttgctgaaccgttaccgatatggcacagaatcc-ggt 60
Query: 61 tgagcaaaatttcaggtgtgtgagaaatttgttaagca 98
||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgagcaaaatttcaggtgtgtgagaaatttgttaagca 98
>RF00726;mir-87;AAQB01006452.1/3553-3454 7260:Drosophila
willistoni
Length = 100
Score = 89.7 bits (45), Expect = 6e-18
Identities = 82/93 (88%), Gaps = 1/93 (1%)
Strand = Plus / Plus
Query: 1 catatttcattcgcgcctgtatcttgctgaaccgtagcca-taatggtctttcatcccgg 59
||||||||||||||||||||||||||||||||||| ||| | || || | | ||||
Sbjct: 2 catatttcattcgcgcctgtatcttgctgaaccgttaccaattgtgatcatcatttccgg 61
Query: 60 ttgagcaaaatttcaggtgtgtgagaaatttgt 92
|||||||||||||||||||||||||||||||||
Sbjct: 62 ttgagcaaaatttcaggtgtgtgagaaatttgt 94
>RF00726;mir-87;AAPU01010611.1/255409-255311 7230:Drosophila
mojavensis
Length = 99
Score = 73.8 bits (37), Expect = 4e-13
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 56 ccggttgagcaaaatttcaggtgtgtgagaaatttgt 92
|||||||||||||||||||||||||||||||||||||
Sbjct: 57 ccggttgagcaaaatttcaggtgtgtgagaaatttgt 93
