miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00694;mir-137;AAFS01000057.1/187400-187500 46245:Drosophila
pseudoobscura pseudoobscura
Length = 101
Score = 200 bits (101), Expect = 3e-51
Identities = 101/101 (100%)
Strand = Plus / Plus
Query: 6 cgactagaatcttcaacggccacgtgtatactcatagctataacctgatatccgaatgtt 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgactagaatcttcaacggccacgtgtatactcatagctataacctgatatccgaatgtt 60
Query: 66 attgcttgagaatacacgtagtttaacaagattcgttcagc 106
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attgcttgagaatacacgtagtttaacaagattcgttcagc 101
>RF00694;mir-137;AASR01013769.1/615-715 7240:Drosophila simulans
Length = 101
Score = 107 bits (54), Expect = 3e-23
Identities = 84/94 (89%)
Strand = Plus / Plus
Query: 13 aatcttcaacggccacgtgtatactcatagctataacctgatatccgaatgttattgctt 72
||||| ||| |||||||||||| ||| |||||||||||||| |||| |||||||||||||
Sbjct: 8 aatctccaatggccacgtgtatgctcgtagctataacctgaaatccaaatgttattgctt 67
Query: 73 gagaatacacgtagtttaacaagattcgttcagc 106
|||||||||||||||| | | ||||| |||||||
Sbjct: 68 gagaatacacgtagttcaccgagatttgttcagc 101
>RF00694;mir-137;AAPP01018794.1/261725-261826 7217:Drosophila
ananassae
Length = 102
Score = 83.8 bits (42), Expect = 4e-16
Identities = 70/78 (89%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 12 gaatcttcaacggccacgtgtatactcatagctataacctgatatccgaa-tgttattgc 70
|||||| ||| |||||||||||| ||| |||||||||| ||| || |||| |||||||||
Sbjct: 7 gaatctccaatggccacgtgtatgctcgtagctataacgtgaaatgcgaaatgttattgc 66
Query: 71 ttgagaatacacgtagtt 88
||||||||||||||||||
Sbjct: 67 ttgagaatacacgtagtt 84
>RF00694;mir-137;AAQB01009904.1/3815-3716 7260:Drosophila willistoni
Length = 100
Score = 77.8 bits (39), Expect = 3e-14
Identities = 74/83 (89%), Gaps = 2/83 (2%)
Strand = Plus / Plus
Query: 23 ggccacgtgtatactcatagctataacctgatatccgaa-tgttattgcttgagaataca 81
|||||||||||| || |||||| ||||||| ||| | || ||||||||||||||||||||
Sbjct: 18 ggccacgtgtattcttatagctgtaacctgttatacaaaatgttattgcttgagaataca 77
Query: 82 cgtagtttaacaagattcgttca 104
||||| ||||| |||||||||||
Sbjct: 78 cgtag-ttaactagattcgttca 99
>RF00694;mir-137;AANI01011213.1/2061-1961 7244:Drosophila virilis
Length = 101
Score = 75.8 bits (38), Expect = 1e-13
Identities = 70/78 (89%), Gaps = 2/78 (2%)
Strand = Plus / Plus
Query: 23 ggccacgtgtatactcatagctataacctg-atatccgaatgttattgcttgagaataca 81
|||||||||||| ||| ||||||||||||| | | | ||||||||||||||||||||||
Sbjct: 18 ggccacgtgtatgctcgtagctataacctgtacaatcaaatgttattgcttgagaataca 77
Query: 82 cgtagtttaacaagattc 99
||||| ||||||||||||
Sbjct: 78 cgtag-ttaacaagattc 94
>RF00694;mir-137;AAPU01010131.1/289658-289758 7230:Drosophila
mojavensis
Length = 101
Score = 58.0 bits (29), Expect = 3e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 60 aatgttattgcttgagaatacacgtagtt 88
|||||||||||||||||||||||||||||
Sbjct: 56 aatgttattgcttgagaatacacgtagtt 84
>RF00694;mir-137;AADG05005118.1/28931-28831 7460:Apis mellifera
(honey bee)
Length = 101
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 62 tgttattgcttgagaatacacgtagttt 89
||||||||||||||||||||||||||||
Sbjct: 57 tgttattgcttgagaatacacgtagttt 84
>RF00694;mir-137;AAGJ02120953.1/3113-3013 7668:Strongylocentrotus
purpuratus
Length = 101
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 61 atgttattgcttgagaatacacgtagt 87
|||||||||||||||||||||||||||
Sbjct: 57 atgttattgcttgagaatacacgtagt 83
>RF00694;mir-137;ABLF01001266.1/4970-5069 7029:Acyrthosiphon pisum
(pea aphid)
Length = 100
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 62 tgttattgcttgagaatacacgtagtt 88
|||||||||||||||||||||||||||
Sbjct: 57 tgttattgcttgagaatacacgtagtt 83
>RF00694;mir-137;AAGE02029705.1/92443-92543 7159:Aedes aegypti
(yellow fever mosquito)
Length = 101
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 62 tgttattgcttgagaatacacgtagtt 88
|||||||||||||||||||||||||||
Sbjct: 58 tgttattgcttgagaatacacgtagtt 84
>RF00694;mir-137;ABKQ02013341.1/3039-2937 377270:Anopheles gambiae
S
Length = 103
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 62 tgttattgcttgagaatacacgtagtt 88
|||||||||||||||||||||||||||
Sbjct: 58 tgttattgcttgagaatacacgtagtt 84
>RF00694;mir-137;AAFR03049204.1/9121-9021 13616:Monodelphis
domestica (gray short-tailed opossum)
Length = 101
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 62 tgttattgcttgagaatacacgtagt 87
||||||||||||||||||||||||||
Sbjct: 56 tgttattgcttgagaatacacgtagt 81
>RF00694;mir-137;AAZO01004444.1/55394-55292 121224:Pediculus
humanus corporis (human body louse)
Length = 103
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 61 atgttattgcttgagaatacacgtag 86
||||||||||||||||||||||||||
Sbjct: 58 atgttattgcttgagaatacacgtag 83
>RF00694;mir-137;BAAB01088495.1/2035-1935 7091:Bombyx mori
(domestic silkworm)
Length = 101
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 61 atgttattgcttgagaatacacgtag 86
||||||||||||||||||||||||||
Sbjct: 56 atgttattgcttgagaatacacgtag 81
>RF00694;mir-137;AAJJ01002111.1/15264-15166 7070:Tribolium
castaneum (red flour beetle)
Length = 99
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 61 atgttattgcttgagaatacacgtag 86
||||||||||||||||||||||||||
Sbjct: 56 atgttattgcttgagaatacacgtag 81
>RF00694;mir-137;AAWZ01010620.1/48359-48459 28377:Anolis
carolinensis (green anole)
Length = 101
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 62 tgttattgcttgagaatacacgtagtt 88
||||||||||||||||||| |||||||
Sbjct: 56 tgttattgcttgagaatacgcgtagtt 82
>RF00694;mir-137;CAAE01013623.1/560-657 99883:Tetraodon
nigroviridis
Length = 98
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 61 atgttattgcttgagaatacacgtagt 87
|||||||||||||||||||| ||||||
Sbjct: 55 atgttattgcttgagaatacgcgtagt 81
>RF00694;mir-137;ABPK01025702.1/584-484 57307:Labeotropheus
fuelleborni
Length = 101
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 61 atgttattgcttgagaatacacgtagt 87
|||||||||||||||||||| ||||||
Sbjct: 56 atgttattgcttgagaatacgcgtagt 82
>RF00694;mir-137;BAAF04031315.1/5933-5836 8090:Oryzias latipes
(Japanese medaka)
Length = 98
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 61 atgttattgcttgagaatacacgtagt 87
|||||||||||||||||||| ||||||
Sbjct: 55 atgttattgcttgagaatacgcgtagt 81
>RF00694;mir-137;ABJB010513068.1/3224-3122 6945:Ixodes scapularis
(black-legged tick)
Length = 103
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 62 tgttattgcttgagaatacacgt 84
|||||||||||||||||||||||
Sbjct: 59 tgttattgcttgagaatacacgt 81
>RF00694;mir-137;AAPN01296459.1/4449-4348 9258:Ornithorhynchus
anatinus (platypus)
Length = 102
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 62 tgttattgcttgagaatacacgtagt 87
||||||||||||||||||| ||||||
Sbjct: 56 tgttattgcttgagaatacgcgtagt 81
>RF00694;mir-137;BAAF04063265.1/5995-5897 8090:Oryzias latipes
(Japanese medaka)
Length = 99
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 61 atgttattgcttgagaatacacgtag 86
|||||||||||||||||||| |||||
Sbjct: 55 atgttattgcttgagaatacgcgtag 80
