miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00706;mir-263;AAFS01001003.1/35414-35505 46245:Drosophila
pseudoobscura pseudoobscura
Length = 92
Score = 180 bits (91), Expect = 2e-45
Identities = 91/91 (100%)
Strand = Plus / Plus
Query: 1 ttgctggcattggctcttggcactgggagaattcacagttggtttccatatattctgtgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgctggcattggctcttggcactgggagaattcacagttggtttccatatattctgtgg 60
Query: 61 ttctgcgggtgccaaaatcgaatgttcggct 91
|||||||||||||||||||||||||||||||
Sbjct: 61 ttctgcgggtgccaaaatcgaatgttcggct 91
>RF00706;mir-263;AAQB01006546.1/140884-140979 7260:Drosophila
willistoni
Length = 96
Score = 81.8 bits (41), Expect = 1e-15
Identities = 67/75 (89%), Gaps = 3/75 (4%)
Strand = Plus / Plus
Query: 15 tcttggcactgggagaattcacagttggtttccat---atattctgtggttctgcgggtg 71
||||||||||||||||||||||||||| || || ||||||||||||||||||||||
Sbjct: 15 tcttggcactgggagaattcacagttgattcttattcgatattctgtggttctgcgggtg 74
Query: 72 ccaaaatcgaatgtt 86
|||||||| ||||||
Sbjct: 75 ccaaaatctaatgtt 89
>RF00706;mir-263;AAPQ01006581.1/272485-272396 7220:Drosophila
erecta
Length = 90
Score = 79.8 bits (40), Expect = 5e-15
Identities = 60/64 (93%), Gaps = 2/64 (3%)
Strand = Plus / Plus
Query: 15 tcttggcactgggagaattcacagttggtttccatatattctgtggttctgcgggtgcca 74
||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||
Sbjct: 15 tcttggcactgggagaattcacagttgatttt-at-tattctgtggttctgcgggtgcca 72
Query: 75 aaat 78
||||
Sbjct: 73 aaat 76
>RF00706;mir-263;AAPP01019315.1/707685-707774 7217:Drosophila
ananassae
Length = 90
Score = 79.8 bits (40), Expect = 5e-15
Identities = 60/64 (93%), Gaps = 2/64 (3%)
Strand = Plus / Plus
Query: 15 tcttggcactgggagaattcacagttggtttccatatattctgtggttctgcgggtgcca 74
||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||
Sbjct: 15 tcttggcactgggagaattcacagttgatttt-at-tattctgtggttctgcgggtgcca 72
Query: 75 aaat 78
||||
Sbjct: 73 aaat 76
>RF00706;mir-263;AANI01017489.1/74722-74633 7244:Drosophila
virilis
Length = 90
Score = 79.8 bits (40), Expect = 5e-15
Identities = 58/64 (90%)
Strand = Plus / Plus
Query: 15 tcttggcactgggagaattcacagttggtttccatatattctgtggttctgcgggtgcca 74
||||||||||||||||||||||||| | || | |||||||||||||||||||||||||
Sbjct: 14 tcttggcactgggagaattcacagtcgattacataatattctgtggttctgcgggtgcca 73
Query: 75 aaat 78
||||
Sbjct: 74 aaat 77
>RF00706;mir-263;AAKO01000155.1/113509-113420 7238:Drosophila
sechellia
Length = 90
Score = 69.9 bits (35), Expect = 5e-12
Identities = 58/63 (92%), Gaps = 2/63 (3%)
Strand = Plus / Plus
Query: 15 tcttggcactgggagaattcacagttggtttccatatattctgtggttctgcgggtgcca 74
||||||||||||||||||||||||||| || || ||||||||||||||||||||||||
Sbjct: 15 tcttggcactgggagaattcacagttgactt-gat-tattctgtggttctgcgggtgcca 72
Query: 75 aaa 77
|||
Sbjct: 73 aaa 75
>RF00706;mir-263;ABKP02026803.1/39465-39371 377271:Anopheles
gambiae M
Length = 95
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 cttggcactgggagaattcacagt 39
||||||||||||||||||||||||
Sbjct: 16 cttggcactgggagaattcacagt 39
>RF00706;mir-263;AADK01025663.1/3361-3450 7091:Bombyx mori
(domestic silkworm)
Length = 90
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 cttggcactgggagaattcacag 38
|||||||||||||||||||||||
Sbjct: 16 cttggcactgggagaattcacag 38
>RF00706;mir-263;AAGE02001908.1/33266-33358 7159:Aedes aegypti
(yellow fever mosquito)
Length = 93
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 cttggcactgggagaattcacag 38
|||||||||||||||||||||||
Sbjct: 16 cttggcactgggagaattcacag 38
