miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00801;mir-280;AAQB01006287.1/166688-166782 7260:Drosophila
willistoni
Length = 95
Score = 147 bits (74), Expect = 3e-35
Identities = 74/74 (100%)
Strand = Plus / Plus
Query: 1 ggcttttatgtatttacgttgcatatgaaatgatatttatagtaaacagattattttata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ggcttttatgtatttacgttgcatatgaaatgatatttatagtaaacagattattttata 61
Query: 61 tgcaggtatgtgca 74
||||||||||||||
Sbjct: 62 tgcaggtatgtgca 75
>RF00801;mir-280;AAPP01018712.1/27830-27743 7217:Drosophila
ananassae
Length = 88
Score = 139 bits (70), Expect = 7e-33
Identities = 73/74 (98%)
Strand = Plus / Plus
Query: 1 ggcttttatgtatttacgttgcatatgaaatgatatttatagtaaacagattattttata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ggcttttatgtatttacgttgcatatgaaatgatatttatagtaaacagattattttata 61
Query: 61 tgcaggtatgtgca 74
||||||||| ||||
Sbjct: 62 tgcaggtatatgca 75
>RF00801;mir-280;AAPT01021476.1/37912-38002 7222:Drosophila
grimshawi
Length = 91
Score = 137 bits (69), Expect = 3e-32
Identities = 69/69 (100%)
Strand = Plus / Plus
Query: 1 ggcttttatgtatttacgttgcatatgaaatgatatttatagtaaacagattattttata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ggcttttatgtatttacgttgcatatgaaatgatatttatagtaaacagattattttata 61
Query: 61 tgcaggtat 69
|||||||||
Sbjct: 62 tgcaggtat 70
>RF00801;mir-280;AANI01014841.1/76079-76175 7244:Drosophila
virilis
Length = 97
Score = 137 bits (69), Expect = 3e-32
Identities = 69/69 (100%)
Strand = Plus / Plus
Query: 1 ggcttttatgtatttacgttgcatatgaaatgatatttatagtaaacagattattttata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ggcttttatgtatttacgttgcatatgaaatgatatttatagtaaacagattattttata 61
Query: 61 tgcaggtat 69
|||||||||
Sbjct: 62 tgcaggtat 70
>RF00801;mir-280;AAPU01010189.1/60454-60360 7230:Drosophila
mojavensis
Length = 95
Score = 135 bits (68), Expect = 1e-31
Identities = 68/68 (100%)
Strand = Plus / Plus
Query: 2 gcttttatgtatttacgttgcatatgaaatgatatttatagtaaacagattattttatat 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 gcttttatgtatttacgttgcatatgaaatgatatttatagtaaacagattattttatat 62
Query: 62 gcaggtat 69
||||||||
Sbjct: 63 gcaggtat 70
