miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00789;mir-286;AAFS01000371.1/25325-25421 46245:Drosophila
pseudoobscura pseudoobscura
Length = 97
Score = 192 bits (97), Expect = 6e-49
Identities = 97/97 (100%)
Strand = Plus / Plus
Query: 1 ttaaaattaaatggcgattgtcggtttggtcgctttttaccagggttccgatcaagcgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttaaaattaaatggcgattgtcggtttggtcgctttttaccagggttccgatcaagcgaa 60
Query: 61 gtgactagaccgaacactcgtgctataattttagaat 97
|||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtgactagaccgaacactcgtgctataattttagaat 97
>RF00789;mir-286;AAPQ01007044.1/1205305-1205207 7220:Drosophila
erecta
Length = 99
Score = 95.6 bits (48), Expect = 1e-19
Identities = 84/95 (88%), Gaps = 2/95 (2%)
Strand = Plus / Plus
Query: 1 ttaaaattaaatggcgattgtcggtttggtcgctttttaccag--ggttccgatcaagcg 58
|||||||| |||||||| ||||||| ||||| |||||| || |||| ||||| ||||
Sbjct: 1 ttaaaattgaatggcgaatgtcggtatggtctctttttcaaagaaggtttcgatcgagcg 60
Query: 59 aagtgactagaccgaacactcgtgctataatttta 93
|||||||||||||||||||||||||||||||||||
Sbjct: 61 aagtgactagaccgaacactcgtgctataatttta 95
>RF00789;mir-286;AAPP01018770.1/56774-56877 7217:Drosophila
ananassae
Length = 104
Score = 83.8 bits (42), Expect = 4e-16
Identities = 85/100 (85%), Gaps = 7/100 (7%)
Strand = Plus / Plus
Query: 1 ttaaaattaaatggcgattgtcggtttggtcgctttttaccag-------ggttccgatc 53
|||||||| |||||||||||||||| |||||||||||| || |||| | | |
Sbjct: 1 ttaaaattgaatggcgattgtcggtatggtcgctttttcacaaaaaaattggttaccaac 60
Query: 54 aagcgaagtgactagaccgaacactcgtgctataatttta 93
||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aagcgaagtgactagaccgaacactcgtgctataatttta 100
>RF00789;mir-286;AAQB01006291.1/71587-71475 7260:Drosophila
willistoni
Length = 113
Score = 69.9 bits (35), Expect = 6e-12
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 59 aagtgactagaccgaacactcgtgctataatttta 93
|||||||||||||||||||||||||||||||||||
Sbjct: 75 aagtgactagaccgaacactcgtgctataatttta 109
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 1 ttaaaattaaatggcgattgtcggtttggtcgcttttt 38
|||||||| |||||||||||||||| | ||| ||||||
Sbjct: 1 ttaaaattgaatggcgattgtcggtatagtctcttttt 38
>RF00789;mir-286;AAPT01006453.1/2821-2925 7222:Drosophila grimshawi
Length = 105
Score = 69.9 bits (35), Expect = 6e-12
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 59 aagtgactagaccgaacactcgtgctataatttta 93
|||||||||||||||||||||||||||||||||||
Sbjct: 67 aagtgactagaccgaacactcgtgctataatttta 101
Score = 65.9 bits (33), Expect = 9e-11
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 1 ttaaaattaaatggcgattgtcggtttggtcgctttt 37
||||||||||||||||||||||||| |||||||||||
Sbjct: 1 ttaaaattaaatggcgattgtcggtatggtcgctttt 37
>RF00789;mir-286;AAPU01010225.1/183664-183561 7230:Drosophila
mojavensis
Length = 104
Score = 69.9 bits (35), Expect = 6e-12
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 59 aagtgactagaccgaacactcgtgctataatttta 93
|||||||||||||||||||||||||||||||||||
Sbjct: 66 aagtgactagaccgaacactcgtgctataatttta 100
Score = 60.0 bits (30), Expect = 6e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 1 ttaaaattaaatggcgattgtcggtttggtcgcttttt 38
||||||||||||||||||||||||| ||||| ||||||
Sbjct: 1 ttaaaattaaatggcgattgtcggtatggtctcttttt 38
>RF00789;mir-286;AANI01014795.1/39192-39293 7244:Drosophila
virilis
Length = 102
Score = 69.9 bits (35), Expect = 6e-12
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 59 aagtgactagaccgaacactcgtgctataatttta 93
|||||||||||||||||||||||||||||||||||
Sbjct: 64 aagtgactagaccgaacactcgtgctataatttta 98
Score = 67.9 bits (34), Expect = 2e-11
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 1 ttaaaattaaatggcgattgtcggtttggtcgcttttt 38
||||||||||||||||||||||||| ||||||||||||
Sbjct: 1 ttaaaattaaatggcgattgtcggtatggtcgcttttt 38
>RF00789;mir-286;ABKP02021621.1/18938-19014 377271:Anopheles
gambiae M
Length = 77
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 59 aagtgactagaccgaacactcgt 81
|||||||||||||||||||||||
Sbjct: 45 aagtgactagaccgaacactcgt 67
>RF00789;mir-286;AAWU01006018.1/401-308 7176:Culex
quinquefasciatus (southern house mosquito)
Length = 94
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 60 agtgactagaccgaacactcgt 81
||||||||||||||||||||||
Sbjct: 59 agtgactagaccgaacactcgt 80
>RF00789;mir-286;AAWU01011011.1/917-844 7176:Culex
quinquefasciatus (southern house mosquito)
Length = 74
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 aagtgactagaccgaacactcg 80
||||||||||||||||||||||
Sbjct: 42 aagtgactagaccgaacactcg 63
>RF00789;mir-286;AAGE02008291.1/17656-17755 7159:Aedes aegypti
(yellow fever mosquito)
Length = 100
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 60 agtgactagaccgaacactcgt 81
||||||||||||||||||||||
Sbjct: 64 agtgactagaccgaacactcgt 85
