miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00786;mir-289;AAIZ01008625.1/677-776 7234:Drosophila persimilis
Length = 100
Score = 198 bits (100), Expect = 9e-51
Identities = 100/100 (100%)
Strand = Plus / Plus
Query: 1 gagtttacagtgaaataaatatttaagtggagcctgcgactgggactccagctctccgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gagtttacagtgaaataaatatttaagtggagcctgcgactgggactccagctctccgac 60
Query: 61 tgggctaactcacttgagcgtttgttggcacgtaaaagac 100
||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgggctaactcacttgagcgtttgttggcacgtaaaagac 100
>RF00786;mir-289;AAEU02000202.1/398546-398448 7245:Drosophila yakuba
Length = 99
Score = 79.8 bits (40), Expect = 6e-15
Identities = 86/100 (86%), Gaps = 1/100 (1%)
Strand = Plus / Plus
Query: 1 gagtttacagtgaaataaatatttaagtggagcctgcgactgggactccagctctccgac 60
||||||||||| ||||||||||||||||||||||||||||| | ||| || | |||
Sbjct: 1 gagtttacagtaaaataaatatttaagtggagcctgcgact-ccagtccctctgactgac 59
Query: 61 tgggctaactcacttgagcgtttgttggcacgtaaaagac 100
|||| ||| || || |||||||||||||||||||||||||
Sbjct: 60 tggggtaagtctctcgagcgtttgttggcacgtaaaagac 99
>RF00786;mir-289;AANI01017445.1/15868-15797 7244:Drosophila virilis
Length = 72
Score = 54.0 bits (27), Expect = 3e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 70 tcacttgagcgtttgttggcacgtaaaagac 100
|||||||| ||||||||||||||||||||||
Sbjct: 42 tcacttgaacgtttgttggcacgtaaaagac 72
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 1 gagtttacagtgaaataaatatttaagtgg 30
||||||||||| ||||||||||| ||||||
Sbjct: 1 gagtttacagtaaaataaatattgaagtgg 30
>RF00786;mir-289;AASU01020046.1/1545-1606 7240:Drosophila simulans
Length = 62
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 atatttaagtggagcctgcgact 41
|||||||||||||||||||||||
Sbjct: 1 atatttaagtggagcctgcgact 23
