miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00743;mir-308;AADE01001573.1/8261-8200 46245:Drosophila
pseudoobscura pseudoobscura
Length = 62
Score = 123 bits (62), Expect = 3e-28
Identities = 62/62 (100%)
Strand = Plus / Plus
Query: 1 ctcgcagtatatttttgtgttttgttgtgtctgaaacgcaaatcacaggattatactgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctcgcagtatatttttgtgttttgttgtgtctgaaacgcaaatcacaggattatactgtg 60
Query: 61 ag 62
||
Sbjct: 61 ag 62
>RF00743;mir-308;AAPU01010142.1/147078-147139 7230:Drosophila
mojavensis
Length = 62
Score = 67.9 bits (34), Expect = 1e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 1 ctcgcagtatatttttgtgttttgttgtgtctgaaacgcaaatcacaggattatactgtg 60
|||||||||||||||||||||||||| | | ||| ||||||||||||||||||||||
Sbjct: 1 ctcgcagtatatttttgtgttttgtttattataaaaatcaaatcacaggattatactgtg 60
Query: 61 ag 62
||
Sbjct: 61 ag 62
>RF00743;mir-308;AE013599.4/10103369-10103307 7227:Drosophila
melanogaster (fruit fly)
Length = 63
Score = 61.9 bits (31), Expect = 8e-10
Identities = 56/63 (88%), Gaps = 1/63 (1%)
Strand = Plus / Plus
Query: 1 ctcgcagtatatttttgtgttttgttgtg-tctgaaacgcaaatcacaggattatactgt 59
|||||||||||||||||||||||||| | | || || |||||||||||||||||||||
Sbjct: 1 ctcgcagtatatttttgtgttttgtttcgttttgcaatccaaatcacaggattatactgt 60
Query: 60 gag 62
|||
Sbjct: 61 gag 63
