miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00807;mir-314;AAFS01000446.1/64778-64866 46245:Drosophila
pseudoobscura pseudoobscura
Length = 89
Score = 176 bits (89), Expect = 3e-44
Identities = 89/89 (100%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaactccgaaatggattttgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaactccgaaatggattttgtt 60
Query: 61 acctctggtattcgagccaataagttcgg 89
|||||||||||||||||||||||||||||
Sbjct: 61 acctctggtattcgagccaataagttcgg 89
>RF00807;mir-314;AAPP01019289.1/431088-431175 7217:Drosophila
ananassae
Length = 88
Score = 129 bits (65), Expect = 6e-30
Identities = 84/89 (94%), Gaps = 1/89 (1%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaactccgaaatggattttgtt 60
||||||||||||||||||||||||||||||||||||||||| || | |||||||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaaatcag-tttggattttgtt 59
Query: 61 acctctggtattcgagccaataagttcgg 89
|||||||||||||||||||||||||||||
Sbjct: 60 acctctggtattcgagccaataagttcgg 88
>RF00807;mir-314;AANI01017486.1/342740-342830 7244:Drosophila
virilis
Length = 91
Score = 63.9 bits (32), Expect = 3e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 50 tggattttgttacctctggtattcgagccaataagttcgg 89
||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 52 tggattttgttgcctttggtattcgagccaataagttcgg 91
>RF00807;mir-314;AAPT01020574.1/773332-773257 7222:Drosophila
grimshawi
Length = 76
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaatgtacct 29
|||||||||||||||||||||||||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaatgtacct 29
Score = 46.1 bits (23), Expect = 7e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 67 ggtattcgagccaataagttcgg 89
|||||||||||||||||||||||
Sbjct: 54 ggtattcgagccaataagttcgg 76
>RF00807;mir-314;AAPU01011627.1/156896-156990 7230:Drosophila
mojavensis
Length = 95
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaatgtacct 29
|||||||||||||||||||||||||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaatgtacct 29
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 66 tggtattcgagccaataagttcgg 89
||||||||||||||||||||||||
Sbjct: 72 tggtattcgagccaataagttcgg 95
