miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00950;mir-927;AAIZ01011894.1/48584-48662 7234:Drosophila
persimilis
Length = 79
Score = 157 bits (79), Expect = 3e-38
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 6 ttgtagtgttttagaattcctacgctttaccgttgcaaaacgaaattcggcaaagcgttt 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgtagtgttttagaattcctacgctttaccgttgcaaaacgaaattcggcaaagcgttt 60
Query: 66 ggattctgaaaccctatga 84
|||||||||||||||||||
Sbjct: 61 ggattctgaaaccctatga 79
>RF00950;mir-927;AABU01002771.1/5147485-5147408 7227:Drosophila
melanogaster (fruit fly)
Length = 78
Score = 109 bits (55), Expect = 6e-24
Identities = 71/75 (94%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 7 tgtagtgttttagaattcctacgctttaccgttgcaaaacgaaattcggcaaagcgtttg 66
||||| |||||||||||||||||||||||||| ||| | |||||||||||||||||||||
Sbjct: 2 tgtagagttttagaattcctacgctttaccgtggcata-cgaaattcggcaaagcgtttg 60
Query: 67 gattctgaaacccta 81
|||||||||||||||
Sbjct: 61 gattctgaaacccta 75
>RF00950;mir-927;AAPP01018483.1/24548-24625 7217:Drosophila
ananassae
Length = 78
Score = 93.7 bits (47), Expect = 4e-19
Identities = 66/71 (92%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 13 gttttagaattcctacgctttaccgttgcaaaacgaaattcggcaaagcgtttggattct 72
||||||||||||||||||||||||||||| | | |||||| |||||||||||||||||||
Sbjct: 8 gttttagaattcctacgctttaccgttgc-atatgaaattaggcaaagcgtttggattct 66
Query: 73 gaaaccctatg 83
| |||||||||
Sbjct: 67 ggaaccctatg 77
>RF00950;mir-927;AAQB01006885.1/24835-24758 7260:Drosophila
willistoni
Length = 78
Score = 83.8 bits (42), Expect = 3e-16
Identities = 64/70 (91%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 8 gtagtgttttagaattcctacgctttaccgttgcaaaacgaaattcggcaaagcgtttgg 67
|||| |||||||||||||||||||||||||| || | ||||| ||||||||||||||||
Sbjct: 3 gtagcgttttagaattcctacgctttaccgtcgccta-cgaaactcggcaaagcgtttgg 61
Query: 68 attctgaaac 77
||||||||||
Sbjct: 62 attctgaaac 71
>RF00950;mir-927;AAPU01009479.1/6269-6192 7230:Drosophila
mojavensis
Length = 78
Score = 73.8 bits (37), Expect = 3e-13
Identities = 59/65 (90%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 13 gttttagaattcctacgctttaccgttgcaaaacgaaattcggcaaagcgtttggattct 72
|||||||||||||||||||||||||| | | ||| |||| |||||||||||||||||||
Sbjct: 8 gttttagaattcctacgctttaccgtcg-tatacgcaatttggcaaagcgtttggattct 66
Query: 73 gaaac 77
|||||
Sbjct: 67 gaaac 71
>RF00950;mir-927;AADK01018362.1/2317-2241 7091:Bombyx mori
(domestic silkworm)
Length = 77
Score = 63.9 bits (32), Expect = 3e-10
Identities = 56/63 (88%), Gaps = 2/63 (3%)
Strand = Plus / Plus
Query: 15 tttagaattcctacgctttaccgttgcaaaacgaaattcggcaaagcgtttggattctga 74
||||||||||||||||||||||||||| || | | || ||||||||||||||||||| |
Sbjct: 10 tttagaattcctacgctttaccgttgccaa--gtagttgggcaaagcgtttggattctaa 67
Query: 75 aac 77
|||
Sbjct: 68 aac 70
>RF00950;mir-927;ABKP02022054.1/6557-6479 377271:Anopheles gambiae
M
Length = 79
Score = 60.0 bits (30), Expect = 5e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 12 tgttttagaattcctacgctttaccgttgcaaaacgaaattcggcaaagcgtttggattc 71
||||||||||||||||||||||||| || || | | | |||||||||||||||||||
Sbjct: 7 tgttttagaattcctacgctttacccgtgattaaagtagtgcggcaaagcgtttggattc 66
Query: 72 tgaaac 77
||||||
Sbjct: 67 tgaaac 72
>RF00950;mir-927;ABLF01004627.1/10448-10374 7029:Acyrthosiphon
pisum (pea aphid)
Length = 75
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 13 gttttagaattcctacgctttaccgt 38
||||||||||||||||||||||||||
Sbjct: 8 gttttagaattcctacgctttaccgt 33
>RF00950;mir-927;AAZX01009215.1/528-602 7425:Nasonia vitripennis
(jewel wasp)
Length = 75
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 12 tgttttagaattcctacgctttaccg 37
||||||||||||||||||||||||||
Sbjct: 7 tgttttagaattcctacgctttaccg 32
>RF00950;mir-927;AADG05003208.1/18292-18365 7460:Apis mellifera
(honey bee)
Length = 74
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 12 tgttttagaattcctacgctttaccg 37
||||||||||||||||||||||||||
Sbjct: 7 tgttttagaattcctacgctttaccg 32
>RF00950;mir-927;AAGE02001795.1/170457-170536 7159:Aedes aegypti
(yellow fever mosquito)
Length = 80
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 tttagaattcctacgctttaccgt 38
||||||||||||||||||||||||
Sbjct: 10 tttagaattcctacgctttaccgt 33
>RF00950;mir-927;AAJJ01000142.1/38253-38326 7070:Tribolium
castaneum (red flour beetle)
Length = 74
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 tttagaattcctacgctttaccgt 38
||||||||||||||||||||||||
Sbjct: 10 tttagaattcctacgctttaccgt 33
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 54 ggcaaagcgtttggattctgaa 75
||||||||||||||||||||||
Sbjct: 44 ggcaaagcgtttggattctgaa 65
>RF00950;mir-927;AAZO01006968.1/5753-5674 121224:Pediculus humanus
corporis (human body louse)
Length = 80
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 15 tttagaattcctacgctttacc 36
||||||||||||||||||||||
Sbjct: 10 tttagaattcctacgctttacc 31
