miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00947;mir-929;AAFS01002785.1/3282-3188 46245:Drosophila
pseudoobscura pseudoobscura
Length = 95
Score = 172 bits (87), Expect = 5e-43
Identities = 87/87 (100%)
Strand = Plus / Plus
Query: 8 attcctgcagcagttcaaattgactctagtagggagtccttttattgagcgactccctaa 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 attcctgcagcagttcaaattgactctagtagggagtccttttattgagcgactccctaa 60
Query: 68 cggagtcagattgaattaccaaggaac 94
|||||||||||||||||||||||||||
Sbjct: 61 cggagtcagattgaattaccaaggaac 87
>RF00947;mir-929;AAQB01008629.1/27335-27241 7260:Drosophila
willistoni
Length = 95
Score = 123 bits (62), Expect = 4e-28
Identities = 80/86 (93%)
Strand = Plus / Plus
Query: 9 ttcctgcagcagttcaaattgactctagtagggagtccttttattgagcgactccctaac 68
||||||| ||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 2 ttcctgcggcagttcaaattgactctagtagggagtcctttatataagcgactccctaac 61
Query: 69 ggagtcagattgaattaccaaggaac 94
|||||||||||||||||| |||||||
Sbjct: 62 ggagtcagattgaattacaaaggaac 87
>RF00947;mir-929;AANI01014363.1/204913-205006 7244:Drosophila
virilis
Length = 94
Score = 121 bits (61), Expect = 2e-27
Identities = 80/85 (94%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 8 attcctgcagcagttcaaattgactctagtagggagtccttttattgagcgactccctaa 67
|||||||| ||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 1 attcctgccgcagttcaaattgactctagtagggagtcctttca-cgagcgactccctaa 59
Query: 68 cggagtcagattgaattaccaagga 92
||||||||||||||||||| |||||
Sbjct: 60 cggagtcagattgaattacaaagga 84
>RF00947;mir-929;AAPU01011179.1/143817-143911 7230:Drosophila
mojavensis
Length = 95
Score = 111 bits (56), Expect = 2e-24
Identities = 65/68 (95%)
Strand = Plus / Plus
Query: 17 gcagttcaaattgactctagtagggagtccttttattgagcgactccctaacggagtcag 76
|||||||||||||||||||||||||||||||||| || | ||||||||||||||||||||
Sbjct: 10 gcagttcaaattgactctagtagggagtccttttttttaacgactccctaacggagtcag 69
Query: 77 attgaatt 84
||||||||
Sbjct: 70 attgaatt 77
>RF00947;mir-929;AABU01002551.1/121293-121386 7227:Drosophila
melanogaster (fruit fly)
Length = 94
Score = 95.6 bits (48), Expect = 1e-19
Identities = 58/60 (96%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 22 tcaaattgactctagtagggagtccttttattgagcgactccctaacggagtcagattga 81
|||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 15 tcaaattgactctagtagggagtcctttaat-gagcgactccctaacggagtcagattga 73
>RF00947;mir-929;ABKP02012769.1/7854-7759 377271:Anopheles gambiae
M
Length = 96
Score = 93.7 bits (47), Expect = 4e-19
Identities = 57/59 (96%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 24 aaattgactctagtagggagtccttttat-tgagcgactccctaacggagtcagattga 81
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 17 aaattgactctagtagggagtccttttatacgagcgactccctaacggagtcagattga 75
>RF00947;mir-929;AAAB01008089.1/34548-34645 180454:Anopheles
gambiae str. PEST
Length = 98
Score = 93.7 bits (47), Expect = 4e-19
Identities = 57/59 (96%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 24 aaattgactctagtagggagtccttttat-tgagcgactccctaacggagtcagattga 81
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 17 aaattgactctagtagggagtccttttatacgagcgactccctaacggagtcagattga 75
>RF00947;mir-929;AAGE02012461.1/76734-76639 7159:Aedes aegypti
(yellow fever mosquito)
Length = 96
Score = 73.8 bits (37), Expect = 4e-13
Identities = 56/61 (91%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 23 caaattgactctagtagggagtccttttat-tgagcgactccctaacggagtcagattga 81
|||||||||||||||||||||||||| | | ||| ||||||||||||||||||||||||
Sbjct: 16 caaattgactctagtagggagtccttgtgtacgagtgactccctaacggagtcagattga 75
Query: 82 a 82
|
Sbjct: 76 a 76
>RF00947;mir-929;AAWU01005610.1/5708-5613 7176:Culex
quinquefasciatus (southern house mosquito)
Length = 96
Score = 71.9 bits (36), Expect = 1e-12
Identities = 55/60 (91%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 23 caaattgactctagtagggagtccttttat-tgagcgactccctaacggagtcagattga 81
|||||||||||||||||||||||||| | | ||| ||||||||||||||||||||||||
Sbjct: 16 caaattgactctagtagggagtccttgtgtacgagtgactccctaacggagtcagattga 75
>RF00947;mir-929;ABLF01011736.1/10860-10764 7029:Acyrthosiphon
pisum (pea aphid)
Length = 97
Score = 67.9 bits (34), Expect = 2e-11
Identities = 58/65 (89%), Gaps = 2/65 (3%)
Strand = Plus / Plus
Query: 20 gttcaaattgactctagtagggagtccttttattga--gcgactccctaacggagtcaga 77
||||||||||||||||||||||||||||| |||| | | |||||||||| || ||||||
Sbjct: 13 gttcaaattgactctagtagggagtccttatatttaatgtgactccctaatggggtcaga 72
Query: 78 ttgaa 82
|||||
Sbjct: 73 ttgaa 77
>RF00947;mir-929;AAZO01002930.1/51339-51440 121224:Pediculus
humanus corporis (human body louse)
Length = 102
Score = 63.9 bits (32), Expect = 3e-10
Identities = 59/67 (88%), Gaps = 7/67 (10%)
Strand = Plus / Plus
Query: 22 tcaaattgactctagtagggagtcc---ttttattga----gcgactccctaacggagtc 74
||||||||||||||||||||||||| ||||||| | |||||||||||||||||||
Sbjct: 15 tcaaattgactctagtagggagtccagcttttattaaaatggcgactccctaacggagtc 74
Query: 75 agattga 81
|||||||
Sbjct: 75 agattga 81
>RF00947;mir-929;AAJJ01001068.1/14929-15025 7070:Tribolium
castaneum (red flour beetle)
Length = 97
Score = 61.9 bits (31), Expect = 1e-09
Identities = 55/62 (88%), Gaps = 2/62 (3%)
Strand = Plus / Plus
Query: 22 tcaaattgactctagtagggagtccttt--tattgagcgactccctaacggagtcagatt 79
||||||||||||||||||||||||| || | | |||||||||||||||||||||| ||
Sbjct: 15 tcaaattgactctagtagggagtccgttactttatagcgactccctaacggagtcaggtt 74
Query: 80 ga 81
||
Sbjct: 75 ga 76
>RF00947;mir-929;AAZX01003135.1/832-932 7425:Nasonia vitripennis
(jewel wasp)
Length = 101
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 22 tcaaattgactctagtagggagtcc 46
|||||||||||||||||||||||||
Sbjct: 15 tcaaattgactctagtagggagtcc 39
>RF00947;mir-929;AADG05005366.1/7427-7326 7460:Apis mellifera
(honey bee)
Length = 102
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 22 tcaaattgactctagtagggagtcc 46
|||||||||||||||||||||||||
Sbjct: 15 tcaaattgactctagtagggagtcc 39
>RF00947;mir-929;BAAB01013302.1/660-751 7091:Bombyx mori (domestic
silkworm)
Length = 92
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 24 aaattgactctagtagggagtcc 46
|||||||||||||||||||||||
Sbjct: 17 aaattgactctagtagggagtcc 39
