miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01996;mir-995;AAIZ01006001.1/48783-48873 7234:Drosophila
persimilis
Length = 91
Score = 168 bits (85), Expect = 7e-42
Identities = 85/85 (100%)
Strand = Plus / Plus
Query: 1 gctgcacaacgcagcccggattctgtgtgtgctgcgctgtgttcttaaaagccgtagcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 gctgcacaacgcagcccggattctgtgtgtgctgcgctgtgttcttaaaagccgtagcac 62
Query: 61 cacatgattcggctgcgtggtcagc 85
|||||||||||||||||||||||||
Sbjct: 63 cacatgattcggctgcgtggtcagc 87
>RF01996;mir-995;AAPP01019564.1/136354-136265 7217:Drosophila
ananassae
Length = 90
Score = 60.0 bits (30), Expect = 5e-09
Identities = 63/73 (86%), Gaps = 2/73 (2%)
Strand = Plus / Plus
Query: 9 acgcagcccggattctgtgtgtgctgcgctgtgttcttaaaagccgtagcaccacatgat 68
||||||||||||||||||| | ||||||| || |||| | |||||||||||||||||
Sbjct: 11 acgcagcccggattctgtgggagctgcgccgt--tctttctatccgtagcaccacatgat 68
Query: 69 tcggctgcgtggt 81
|||||| ||||||
Sbjct: 69 tcggcttcgtggt 81
>RF01996;mir-995;AASS01029797.1/1529-1618 7240:Drosophila simulans
Length = 90
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 52 ccgtagcaccacatgattcggctgcgtggt 81
||||||||||||||||||||||| ||||||
Sbjct: 52 ccgtagcaccacatgattcggcttcgtggt 81
>RF01996;mir-995;AAPT01018750.1/3883-3988 7222:Drosophila
grimshawi
Length = 106
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 53 cgtagcaccacatgattcggctgcgtggt 81
|||||||||||||||||||||| ||||||
Sbjct: 68 cgtagcaccacatgattcggcttcgtggt 96
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 13 agcccggattctgtgtgtgctgcg 36
||||||||||||||||||||||||
Sbjct: 15 agcccggattctgtgtgtgctgcg 38
>RF01996;mir-995;AANI01017183.1/395-306 7244:Drosophila virilis
Length = 90
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 53 cgtagcaccacatgattcggctgcgtggt 81
|||||||||||||||||||||| ||||||
Sbjct: 52 cgtagcaccacatgattcggcttcgtggt 80
>RF01996;mir-995;AAQB01008976.1/639591-639498 7260:Drosophila
willistoni
Length = 94
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 53 cgtagcaccacatgattcggct 74
||||||||||||||||||||||
Sbjct: 57 cgtagcaccacatgattcggct 78
>RF01996;mir-995;AAPU01011147.1/810709-810797 7230:Drosophila
mojavensis
Length = 89
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 53 cgtagcaccacatgattcggct 74
||||||||||||||||||||||
Sbjct: 51 cgtagcaccacatgattcggct 72
