miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01944;mir-2518;AAFS01004297.1/5145-5043 46245:Drosophila
pseudoobscura pseudoobscura
Length = 103
Score = 135 bits (68), Expect = 1e-31
Identities = 71/72 (98%)
Strand = Plus / Plus
Query: 21 gaccgtttcgaccccgttgcgaatcgaacttggtttgagttcgagcagcgggtcgatccg 80
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 29 gaccgtttcgaccccgttgcgaatcgaacttggttcgagttcgagcagcgggtcgatccg 88
Query: 81 agccatagccca 92
||||||||||||
Sbjct: 89 agccatagccca 100
>RF01944;mir-2518;AADE01009281.1/13064-13168 46245:Drosophila
pseudoobscura pseudoobscura
Length = 105
Score = 89.7 bits (45), Expect = 6e-18
Identities = 54/57 (94%)
Strand = Plus / Plus
Query: 36 gttgcgaatcgaacttggtttgagttcgagcagcgggtcgatccgagccatagccca 92
||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 46 gttgcgagtcgaacttggttcgagctcgagcagcgggtcgatccgagccatagccca 102
>RF01944;mir-2518;AAFS01002641.1/8771-8667 46245:Drosophila
pseudoobscura pseudoobscura
Length = 105
Score = 89.7 bits (45), Expect = 6e-18
Identities = 60/65 (92%)
Strand = Plus / Plus
Query: 28 tcgaccccgttgcgaatcgaacttggtttgagttcgagcagcgggtcgatccgagccata 87
|||| ||||||||||||| ||||||||| ||||||||||| ||||||||||| |||||||
Sbjct: 38 tcgaacccgttgcgaatctaacttggttcgagttcgagcaacgggtcgatccaagccata 97
Query: 88 gccca 92
|||||
Sbjct: 98 gccca 102
>RF01944;mir-2518;AAIZ01003540.1/11397-11297 7234:Drosophila
persimilis
Length = 101
Score = 81.8 bits (41), Expect = 1e-15
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 28 tcgaccccgttgcgaatcgaacttggtttgagttcgagcagcgggtcgatccgagccata 87
|||| ||||||||| ||||||||||||| ||| |||||||||||||||||||| |||||
Sbjct: 34 tcgaacccgttgcgtatcgaacttggttcgagctcgagcagcgggtcgatccgtgccatt 93
Query: 88 gccca 92
|||||
Sbjct: 94 gccca 98
>RF01944;mir-2518;AADE01004223.1/2531-2427 46245:Drosophila
pseudoobscura pseudoobscura
Length = 105
Score = 77.8 bits (39), Expect = 2e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 34 ccgttgcgaatcgaacttggtttgagttcgagcagcgggtcgatccgagccatagccca 92
|||||||| |||||||| ||| |||||||||||| |||||||||||||||||||||||
Sbjct: 44 ccgttgcgtatcgaactacgttcgagttcgagcagtgggtcgatccgagccatagccca 102
>RF01944;mir-2518;AADE01008367.1/2588-2708 46245:Drosophila
pseudoobscura pseudoobscura
Length = 121
Score = 73.8 bits (37), Expect = 3e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 28 tcgaccccgttgcgaatcgaacttggtttgagttcgagcagcgggtcgatccg 80
|||| ||||||||||||||||||||||| ||| |||||| |||||||||||||
Sbjct: 54 tcgagcccgttgcgaatcgaacttggttcgagctcgagcggcgggtcgatccg 106
>RF01944;mir-2518;AAIZ01013320.1/1017-1121 7234:Drosophila
persimilis
Length = 105
Score = 73.8 bits (37), Expect = 3e-13
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 28 tcgaccccgttgcgaatcgaacttggtttgagttcgagcagcgggtcgatccgagccata 87
|||| ||||||||| ||||||||||||| ||| |||||| ||||||||||||| |||||
Sbjct: 38 tcgagcccgttgcgtatcgaacttggttcgagctcgagcggcgggtcgatccgtgccatt 97
Query: 88 gccca 92
|||||
Sbjct: 98 gccca 102
