miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00726;mir-87;AASW01042897.1/1205-1302 7240:Drosophila simulans
Length = 98
Score = 174 bits (88), Expect = 1e-43
Identities = 91/92 (98%)
Strand = Plus / Plus
Query: 1 cacatttcattcgcgcctgtatcttgctgaaccgctgccatcatggccaacgatccggtt 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 2 cacatttcattcgcgcctgtatcttgctgaaccgctgccattatggccaacgatccggtt 61
Query: 61 gagcaaaatttcaggtgtgtgagaaatgtgtt 92
||||||||||||||||||||||||||||||||
Sbjct: 62 gagcaaaatttcaggtgtgtgagaaatgtgtt 93
>RF00726;mir-87;AAPP01015726.1/103266-103169 7217:Drosophila
ananassae
Length = 98
Score = 97.6 bits (49), Expect = 2e-20
Identities = 79/89 (88%)
Strand = Plus / Plus
Query: 4 atttcattcgcgcctgtatcttgctgaaccgctgccatcatggccaacgatccggttgag 63
||||||||||||||||||||||||||||||| | || ||||| | |||||||||||
Sbjct: 5 atttcattcgcgcctgtatcttgctgaaccgttaccgatatggcacagaatccggttgag 64
Query: 64 caaaatttcaggtgtgtgagaaatgtgtt 92
|||||||||||||||||||||||| ||||
Sbjct: 65 caaaatttcaggtgtgtgagaaatttgtt 93
>RF00726;mir-87;AADE01000150.1/47415-47513 46245:Drosophila
pseudoobscura pseudoobscura
Length = 99
Score = 91.7 bits (46), Expect = 1e-18
Identities = 80/90 (88%), Gaps = 1/90 (1%)
Strand = Plus / Plus
Query: 4 atttcattcgcgcctgtatcttgctgaaccgctgccatcatggccaacgatcc-ggttga 62
||||||||||||||||||||||||||||||| ||||| |||| | |||| ||||||
Sbjct: 5 atttcattcgcgcctgtatcttgctgaaccgtagccataatggtctttcatcccggttga 64
Query: 63 gcaaaatttcaggtgtgtgagaaatgtgtt 92
||||||||||||||||||||||||| ||||
Sbjct: 65 gcaaaatttcaggtgtgtgagaaatttgtt 94
>RF00726;mir-87;AAPU01010611.1/255409-255311 7230:Drosophila
mojavensis
Length = 99
Score = 73.8 bits (37), Expect = 3e-13
Identities = 75/86 (87%), Gaps = 5/86 (5%)
Strand = Plus / Plus
Query: 5 tttcattcgcgcctgtatcttgctgaaccgctgccat---catggccaacgatccggttg 61
|||||||||||||||||||||||||||||| | | || || |||| |||||||||
Sbjct: 6 tttcattcgcgcctgtatcttgctgaaccgttacaattgtcacatccaa--atccggttg 63
Query: 62 agcaaaatttcaggtgtgtgagaaat 87
||||||||||||||||||||||||||
Sbjct: 64 agcaaaatttcaggtgtgtgagaaat 89
>RF00726;mir-87;AAQB01006452.1/3553-3454 7260:Drosophila
willistoni
Length = 100
Score = 67.9 bits (34), Expect = 2e-11
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 54 tccggttgagcaaaatttcaggtgtgtgagaaat 87
||||||||||||||||||||||||||||||||||
Sbjct: 57 tccggttgagcaaaatttcaggtgtgtgagaaat 90
