miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00807;mir-314;AAPP01019289.1/431088-431175 7217:Drosophila
ananassae
Length = 88
Score = 123 bits (62), Expect = 4e-28
Identities = 85/90 (94%), Gaps = 2/90 (2%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaagtcccgtgtcggattttgt 60
||||||||||||||||||||||||||||||||||||||||| | | || | |||||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaaat-cagt-ttggattttgt 58
Query: 61 tacctctggtattcgagccaataagttcgg 90
||||||||||||||||||||||||||||||
Sbjct: 59 tacctctggtattcgagccaataagttcgg 88
>RF00807;mir-314;AAFS01000446.1/64778-64866 46245:Drosophila
pseudoobscura pseudoobscura
Length = 89
Score = 123 bits (62), Expect = 4e-28
Identities = 84/90 (93%), Gaps = 1/90 (1%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaagtcccgtgtcggattttgt 60
||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaact-ccgaaatggattttgt 59
Query: 61 tacctctggtattcgagccaataagttcgg 90
||||||||||||||||||||||||||||||
Sbjct: 60 tacctctggtattcgagccaataagttcgg 89
>RF00807;mir-314;AANI01017486.1/342740-342830 7244:Drosophila
virilis
Length = 91
Score = 67.9 bits (34), Expect = 2e-11
Identities = 82/93 (88%), Gaps = 5/93 (5%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaa--aagtcc-cgtgtcggattt 57
|||||||||||||||||| |||||||||| ||||||||| || || ||| | ||||||
Sbjct: 1 tcgtaacttgtgtggctt-gaatgtacctggttgaggaacgaattcaacgttt-ggattt 58
Query: 58 tgttacctctggtattcgagccaataagttcgg 90
|||| ||| ||||||||||||||||||||||||
Sbjct: 59 tgttgcctttggtattcgagccaataagttcgg 91
>RF00807;mir-314;AAPU01011627.1/156896-156990 7230:Drosophila
mojavensis
Length = 95
Score = 60.0 bits (30), Expect = 5e-09
Identities = 80/95 (84%), Gaps = 5/95 (5%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaatgtacctagttgag-gaaaag----tcccgtgtcggat 55
||||||||||||||||||||||||||||| || ||| |||||| | | ||| ||||
Sbjct: 1 tcgtaacttgtgtggcttcgaatgtacctcgtcgagcgaaaagcgaattcattgttggat 60
Query: 56 tttgttacctctggtattcgagccaataagttcgg 90
|||||| | ||||||||||||||||||||||||
Sbjct: 61 tttgttgctcttggtattcgagccaataagttcgg 95
>RF00807;mir-314;AAPT01020574.1/773332-773257 7222:Drosophila
grimshawi
Length = 76
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaatgtacct 29
|||||||||||||||||||||||||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaatgtacct 29
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 68 ggtattcgagccaataagttcgg 90
|||||||||||||||||||||||
Sbjct: 54 ggtattcgagccaataagttcgg 76
