miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 129 bits (65), Expect = 8e-30
Identities = 99/109 (90%), Gaps = 1/109 (0%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||| ||||||||||||||||||||||| | ||||||||||||||||||||| ||||
Sbjct: 112 tttcataatgtaagtcattctagcatttcctacattcatattgatgttaatgaatctaga 53
Query: 62 catatatgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
| |||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct: 52 ta-atatggaaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 60.0 bits (30), Expect = 6e-09
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 70 ggaaatgctagaatgatttacattgtgaaacggaggaagtag 111
|||||||||||||||| ||||||| ||||||||||| |||||
Sbjct: 83 ggaaatgctagaatgacttacattatgaaacggagggagtag 124
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcattt 29
||||||||||||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcattt 43
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 123 bits (62), Expect = 5e-28
Identities = 98/110 (89%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||||||||||||||||||||||||||| || |||||||| |||||||||||| |||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatatagatgttaatgaatctata 75
Query: 62 catatatgggaaatgctagaatgatttacattgtgaaacggaggaagtag 111
|| |||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 76 tgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagtag 125
Score = 75.8 bits (38), Expect = 1e-13
Identities = 95/112 (84%), Gaps = 4/112 (3%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||||||||||||||||||||||||||| || |||||||| ||| | || ||| |
Sbjct: 113 tttcacaatgtaagtcattctagcatttcccacattcatatagat--tcattaacatcta 56
Query: 62 cat--atatgggaaatgctagaatgatttacattgtgaaacggaggaagtag 111
|| || |||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 55 tatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagtag 4
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 115 bits (58), Expect = 1e-25
Identities = 99/112 (88%), Gaps = 3/112 (2%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag- 60
||||||||| ||||||||||||||||||| || ||||||||||||||||||||| ||||
Sbjct: 116 tttcacaatataagtcattctagcatttctcacattcatattgatgttaatgaatctaga 57
Query: 61 --gcatatatgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
| || || ||||||||||||||| ||||||||||||||||||||||||
Sbjct: 56 tagtctagattcgaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 63.9 bits (32), Expect = 4e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 71 gaaatgctagaatgatttacattgtgaaacggaggaagta 110
||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 88 gaaatgctagaatgacttatattgtgaaacggaggaagta 127
Score = 58.0 bits (29), Expect = 3e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttc 30
|||||||||||||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttc 44
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 113 bits (57), Expect = 5e-25
Identities = 99/112 (88%), Gaps = 2/112 (1%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||| ||||||||||||||||||||||| ||||||||||||||| |||||||| |||
Sbjct: 115 tttcataatgtaagtcattctagcatttctcatattcatattgatattaatgaatctaaa 56
Query: 62 cat--atatgggaaatgctagaatgatttacattgtgaaacggaggaagtag 111
|| || ||| |||||||||||||| ||| |||||||||||||||||||||
Sbjct: 55 tataaatgtggaaaatgctagaatgacttatattgtgaaacggaggaagtag 4
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 65 atatgggaaatgctagaatgatttacattgtgaaacggaggaagtag 111
||||| ||||||||||||||| ||||||| ||||||||||| |||||
Sbjct: 81 atatgagaaatgctagaatgacttacattatgaaacggagggagtag 127
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcattt 29
||||||||| ||||||||||||||||||
Sbjct: 16 tttcacaatataagtcattctagcattt 43
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 101 bits (51), Expect = 2e-21
Identities = 57/59 (96%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||
Sbjct: 128 tttcacaatgtaagtcattctagcatttcccatattcatattgatgttaatgaatctag 70
Score = 75.8 bits (38), Expect = 1e-13
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 65 atatgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
||||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 94 atatgggaaatgctagaatgacttacattgtgaaacggagggagta 139
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcat 40
||||| ||||||||||||||||||||||| |||||||||
Sbjct: 16 tttcataatgtaagtcattctagcatttcccatattcat 54
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 101 bits (51), Expect = 2e-21
Identities = 63/67 (94%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
|||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattcaagcatttcccatattcatattgatgttaatgaatctaga 75
Query: 62 catatat 68
|||||||
Sbjct: 76 catatat 82
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/51 (94%), Gaps = 2/51 (3%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaat 52
||||||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 145 tttcacaatgtaagtcattctagcatttcac--atttatattgatgttaat 97
Score = 69.9 bits (35), Expect = 7e-12
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 65 atatgggaaatgctagaatgatttacattgtgaaacggaggaagtag 111
|||||||||||||| |||||| ||||||||||||||||||| |||||
Sbjct: 50 atatgggaaatgcttgaatgacttacattgtgaaacggagggagtag 4
Score = 65.9 bits (33), Expect = 1e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 71 gaaatgctagaatgatttacattgtgaaacggaggaagtag 111
||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 117 gaaatgctagaatgacttacattgtgaaacggagggagtag 157
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 101 bits (51), Expect = 2e-21
Identities = 63/67 (94%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||
Sbjct: 147 tttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctaga 88
Query: 62 catatat 68
|||||||
Sbjct: 87 catatat 81
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagtag 111
|||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 116 tgggaaatgctagaatgacttacattgtgaaacggagggagtag 159
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||| ||||| ||||||||||||||||||| ||||
Sbjct: 43 aaatgctataatgacttacattgtgaaacggagggagta 5
Score = 54.0 bits (27), Expect = 4e-07
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaat 52
||||||||||||||||||| |||||||| || ||||||||| || |||||
Sbjct: 16 tttcacaatgtaagtcattatagcattttccacattcatatttatattaat 66
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa
Japonica Group
Length = 144
Score = 101 bits (51), Expect = 2e-21
Identities = 63/67 (94%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctaga 75
Query: 62 catatat 68
|||||||
Sbjct: 76 catatat 82
Score = 69.9 bits (35), Expect = 7e-12
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 47 tgggaaatgctagaatgacttacattgtgaaacggaggtagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcattt 29
||||||||||||||||||||||||||||
Sbjct: 129 tttcacaatgtaagtcattctagcattt 102
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 101 bits (51), Expect = 2e-21
Identities = 57/59 (96%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccatattcatattgatgttaatgaatctag 74
Score = 75.8 bits (38), Expect = 1e-13
Identities = 44/46 (95%)
Strand = Plus / Minus
Query: 65 atatgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
||||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 50 atatgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcat 40
||||| ||||||||||||||||||||||| |||||||||
Sbjct: 128 tttcataatgtaagtcattctagcatttcccatattcat 90
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 101 bits (51), Expect = 2e-21
Identities = 63/67 (94%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
|||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||
Sbjct: 145 tttcacaatgtaagtcattcaagcatttcccatattcatattgatgttaatgaatctaga 86
Query: 62 catatat 68
|||||||
Sbjct: 85 catatat 79
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/51 (94%), Gaps = 2/51 (3%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaat 52
||||||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcac--atttatattgatgttaat 64
Score = 69.9 bits (35), Expect = 7e-12
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 65 atatgggaaatgctagaatgatttacattgtgaaacggaggaagtag 111
|||||||||||||| |||||| ||||||||||||||||||| |||||
Sbjct: 111 atatgggaaatgcttgaatgacttacattgtgaaacggagggagtag 157
Score = 65.9 bits (33), Expect = 1e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 71 gaaatgctagaatgatttacattgtgaaacggaggaagtag 111
||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacggagggagtag 4
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 101 bits (51), Expect = 2e-21
Identities = 63/67 (94%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||||
Sbjct: 16 tttcataatgtaagtcattctagcatttctcatattcatattgatgttaatgaatctaga 75
Query: 62 catatat 68
|||||||
Sbjct: 76 catatat 82
Score = 60.0 bits (30), Expect = 6e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 65 atatgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
||||| ||||||||||||||| ||||||| ||||||||||| ||||
Sbjct: 50 atatgagaaatgctagaatgacttacattatgaaacggagggagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 6 acaatgtaagtcattctagcatttcacatattcata 41
||||||||||||||||||||||||| || |||||||
Sbjct: 130 acaatgtaagtcattctagcatttcccacattcata 95
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 101 bits (51), Expect = 2e-21
Identities = 57/59 (96%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccatattcatattgatgttaatgaatctag 74
Score = 93.7 bits (47), Expect = 5e-19
Identities = 56/59 (94%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
||||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||||
Sbjct: 129 tttcataatgtaagtcattctagcatttcccatattcatattgatgttaatgaatctag 71
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 99.6 bits (50), Expect = 7e-21
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctaga 75
Query: 62 catata 67
||||||
Sbjct: 76 catata 81
Score = 77.8 bits (39), Expect = 3e-14
Identities = 42/43 (97%)
Strand = Plus / Minus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 47 tgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 99.6 bits (50), Expect = 7e-21
Identities = 93/109 (85%), Gaps = 10/109 (9%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 103 tttcacaatgtaagtcattctagcatttcctacattcatattgatgttaatga------- 51
Query: 62 catatatgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|| |||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 50 ---atgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 75.8 bits (38), Expect = 1e-13
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 70 ggaaatgctagaatgatttacattgtgaaacggaggaagtag 111
|||||||||||||||| |||||||||||||||||||||||||
Sbjct: 74 ggaaatgctagaatgacttacattgtgaaacggaggaagtag 115
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcat 40
||||||||||||||||||||||||||||| || ||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcat 54
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 99.6 bits (50), Expect = 7e-21
Identities = 98/115 (85%), Gaps = 8/115 (6%)
Strand = Plus / Plus
Query: 5 cacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctaggcat 64
|||||||||||||||| ||||||||| |||||| ||||||||| ||||||| |||| |||
Sbjct: 19 cacaatgtaagtcattatagcatttcccatatttatattgatgctaatgaatctagacat 78
Query: 65 --------atatgggaaatgctagaatgatttacattgtgaaacggaggaagtag 111
|| ||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 79 caatatgaatgtgggaaatgctagaatgtcttacattgtgaaacggaggaagtag 133
Score = 69.9 bits (35), Expect = 7e-12
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgt 48
|||||||||||||| |||||||||||||| || ||||||||||||||
Sbjct: 121 tttcacaatgtaagacattctagcatttcccacattcatattgatgt 75
Score = 60.0 bits (30), Expect = 6e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 65 atatgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
||||||||||||||| ||||| |||||||||| |||||||| ||||
Sbjct: 50 atatgggaaatgctataatgacttacattgtggaacggagggagta 5
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 95.6 bits (48), Expect = 1e-19
Identities = 99/117 (84%), Gaps = 8/117 (6%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||||||| ||||||||||||||||||| || ||||||||| ||| ||||||| ||||
Sbjct: 121 tttcacaatataagtcattctagcatttcccacattcatattaatgctaatgaatctaga 62
Query: 62 cat--------atatgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|| || |||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 61 tatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 73.8 bits (37), Expect = 4e-13
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgat 46
||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatattgat 60
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||||||| ||| ||||||||||||||| ||||
Sbjct: 90 tgggaaatgctagaatgacttatattgtgaaacggagggagta 132
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 95.6 bits (48), Expect = 1e-19
Identities = 96/111 (86%), Gaps = 2/111 (1%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||||||||||||||||||||||||||| | |||||||||||| |||||||| ||
Sbjct: 115 tttcacaatgtaagtcattctagcatttccaacattcatattgatattaatgaatatata 56
Query: 62 cat--atatgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|| | |||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 55 tatgaacgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 75.8 bits (38), Expect = 1e-13
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 70 ggaaatgctagaatgatttacattgtgaaacggaggaagtag 111
|||||||||||||||| |||||||||||||||||||||||||
Sbjct: 86 ggaaatgctagaatgacttacattgtgaaacggaggaagtag 127
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 95.6 bits (48), Expect = 1e-19
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||
Sbjct: 135 tttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaaactaga 76
Query: 62 cata 65
||||
Sbjct: 75 cata 72
Score = 75.8 bits (38), Expect = 1e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaa 55
||||| |||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 16 tttcataatgtaagtcattctagcattttccacattcatattgatgttaatgaa 69
Score = 63.9 bits (32), Expect = 4e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagtag 111
|||||||||||||| ||||||| |||||||||||||||||
Sbjct: 43 aaatgctagaatgacttacattatgaaacggaggaagtag 4
Score = 63.9 bits (32), Expect = 4e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagtag 111
|||||||||||||||||| |||||||||||||| |||| |||||
Sbjct: 104 tgggaaatgctagaatgacttacattgtgaaaccgagggagtag 147
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 95.6 bits (48), Expect = 1e-19
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||||||||||||||||||||||||||| || |||||||||||||| |||||| ||||
Sbjct: 147 tttcacaatgtaagtcattctagcatttctcacattcatattgatgtcaatgaatctaga 88
Query: 62 catatatg 69
||||||||
Sbjct: 87 catatatg 80
Score = 65.9 bits (33), Expect = 1e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattga 45
|||||||||||||||||||||||||| || || |||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatntctcacattcatattga 59
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 71 gaaatgctagaatgatttacattgtgaaacggagg 105
||||||||||||||| |||||||||||||||||||
Sbjct: 119 gaaatgctagaatgacttacattgtgaaacggagg 153
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 74 atgctagaatgatttacattgtgaaacggagg 105
|||||||||||| |||||||||||||||||||
Sbjct: 41 atgctagaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 95.6 bits (48), Expect = 1e-19
Identities = 98/115 (85%), Gaps = 6/115 (5%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||||||||||||||||||||||||||| || ||||||||| | ||||||| ||||
Sbjct: 119 tttcacaatgtaagtcattctagcatttcccacattcatattagtactaatgaatctaga 60
Query: 62 catata------tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||| || ||||||||||||| | ||||||||||||||||||||||||
Sbjct: 59 catatatgaatgtgagaaatgctagaataacttacattgtgaaacggaggaagta 5
Score = 77.8 bits (39), Expect = 3e-14
Identities = 42/43 (97%)
Strand = Plus / Plus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 88 tgggaaatgctagaatgacttacattgtgaaacggaggaagta 130
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatat 42
||||||||||||||| ||||||||||||| || ||||||||
Sbjct: 16 tttcacaatgtaagttattctagcatttctcacattcatat 56
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 95.6 bits (48), Expect = 1e-19
Identities = 99/117 (84%), Gaps = 8/117 (6%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||||||| ||||||||||||||||||| || ||||||||| ||| ||||||| ||||
Sbjct: 16 tttcacaatataagtcattctagcatttcccacattcatattaatgctaatgaatctaga 75
Query: 62 cat--------atatgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|| || |||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 76 tatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 132
Score = 73.8 bits (37), Expect = 4e-13
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgat 46
||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 121 tttcacaatgtaagtcattctagcatttcccacattcatattgat 77
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||||||| ||| ||||||||||||||| ||||
Sbjct: 47 tgggaaatgctagaatgacttatattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 95.6 bits (48), Expect = 1e-19
Identities = 98/115 (85%), Gaps = 6/115 (5%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||||||||||||||||||||||||||| || |||||||||| |||||||||| ||
Sbjct: 16 tttcacaatgtaagtcattctagcatttctcacattcatattgctgttaatgaatatata 75
Query: 62 cat------atatgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|| |||||| |||||||||||||| ||||||||||||||||||| ||||
Sbjct: 76 tatatatgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 130
Score = 71.9 bits (36), Expect = 2e-12
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 71 gaaatgctagaatgatttacattgtgaaacggaggaagta 110
||||||||||||||| ||||||||||||||||||||||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 65.9 bits (33), Expect = 1e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatat 42
|||||||||||||||||||||||||||| |||||||||||
Sbjct: 119 tttcacaatgtaagtcattctagcattttccatattcatat 79
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 95.6 bits (48), Expect = 1e-19
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 5 cacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctaggcat 64
|||||||||||||||||||||||||| || ||||||||||||||||||||| |||| |||
Sbjct: 142 cacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctagacat 83
Query: 65 atat 68
||||
Sbjct: 82 atat 79
Score = 71.9 bits (36), Expect = 2e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 5 cacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctaggcat 64
||||||||||||||||||||||||| | ||||||||||||||||||||| ||| |||
Sbjct: 19 cacaatgtaagtcattctagcattttctacattcatattgatgttaatgaatgtagacat 78
Query: 65 atat 68
||||
Sbjct: 79 atat 82
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||| |||||||||| |||||||||||||
Sbjct: 43 aaatgctagaatgacttacattgtggaacggaggaagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||||||| |||||||||| |||||||| ||||
Sbjct: 114 tgggaaatgctagaatgacttacattgtggaacggagggagta 156
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 95.6 bits (48), Expect = 1e-19
Identities = 101/121 (83%), Gaps = 12/121 (9%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
|||||||||||||||||||||| |||||| || ||||||||||||||||||||| ||||
Sbjct: 125 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctaga 66
Query: 62 ca------------tatatgggaaatgctagaatgatttacattgtgaaacggaggaagt 109
| ||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 65 tagatatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaagt 6
Query: 110 a 110
|
Sbjct: 5 a 5
Score = 81.8 bits (41), Expect = 2e-15
Identities = 44/45 (97%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgat 46
||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccatattcatattgat 60
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
||||||||| |||||||| ||||||||||||||||||| ||||
Sbjct: 94 tgggaaatgttagaatgacttacattgtgaaacggagggagta 136
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 93.7 bits (47), Expect = 5e-19
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctag 74
Score = 91.7 bits (46), Expect = 2e-18
Identities = 52/54 (96%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaa 55
||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 146 tttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaa 93
Score = 77.8 bits (39), Expect = 3e-14
Identities = 42/43 (97%)
Strand = Plus / Minus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 47 tgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 69.9 bits (35), Expect = 7e-12
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 115 tgggaaatgctagaatgacttacattgtgaaacggagggagta 157
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 93.7 bits (47), Expect = 5e-19
Identities = 56/59 (94%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||
Sbjct: 134 tttcacaatgtaagtcattctagcattttccatattcatattgatgttaatgaatctag 76
Score = 69.9 bits (35), Expect = 7e-12
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaat 52
||||| ||||||||||||||||||||||| || ||| ||||||||||||||
Sbjct: 16 tttcataatgtaagtcattctagcatttctcacatttatattgatgttaat 66
Score = 67.9 bits (34), Expect = 3e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 65 atatgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||| |||||||||||||| ||||||||||||||||||| ||||
Sbjct: 100 atatggaaaatgctagaatgacttacattgtgaaacggagggagta 145
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 71 gaaatgctagaatgatttacattgtgaaacggaggaagt 109
||||||||||||||| ||||||| |||||||||||||||
Sbjct: 44 gaaatgctagaatgacttacattatgaaacggaggaagt 6
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 93.7 bits (47), Expect = 5e-19
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaatctag 74
Score = 75.8 bits (38), Expect = 1e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaa 55
|||||||||||||||||||||||||||| |||||| |||||||| ||||||||
Sbjct: 135 tttcacaatgtaagtcattctagcattttccatatttatattgatattaatgaa 82
Score = 67.9 bits (34), Expect = 3e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 65 atatgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||| |||||||||||||| ||||||||||||||||||| ||||
Sbjct: 101 atatggaaaatgctagaatgacttacattgtgaaacggagggagta 146
Score = 63.9 bits (32), Expect = 4e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 71 gaaatgctagaatgatttacattgtgaaacggaggaagta 110
||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacggaagaagta 5
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 93.7 bits (47), Expect = 5e-19
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaatctag 74
Score = 67.9 bits (34), Expect = 3e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaa 55
||||||||||||||||||| |||||||| |||||| |||||||| ||||||||
Sbjct: 135 tttcacaatgtaagtcattatagcattttccatatttatattgatattaatgaa 82
Score = 63.9 bits (32), Expect = 4e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 71 gaaatgctagaatgatttacattgtgaaacggaggaagta 110
||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacggaagaagta 5
Score = 60.0 bits (30), Expect = 6e-09
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 65 atatgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||| |||||||| ||||| ||||||||||||||||||| ||||
Sbjct: 101 atatggaaaatgctataatgacttacattgtgaaacggagggagta 146
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 93.7 bits (47), Expect = 5e-19
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctag 74
Score = 93.7 bits (47), Expect = 5e-19
Identities = 56/59 (94%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||
Sbjct: 138 tttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctag 80
Score = 79.8 bits (40), Expect = 7e-15
Identities = 43/44 (97%)
Strand = Plus / Minus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagtag 111
|||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 47 tgggaaatgctagaatgacttacattgtgaaacggaggaagtag 4
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagtag 111
|||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 107 tgggaaatgctagaatgacttacattgtgaaacggagggagtag 150
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 93.7 bits (47), Expect = 5e-19
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||||||||||||||||||||||||||| || ||||||||| ||||||||||| ||||
Sbjct: 147 tttcacaatgtaagtcattctagcatttctcacattcatattaatgttaatgaatctaga 88
Query: 62 catatat 68
|||||||
Sbjct: 87 catatat 81
Score = 85.7 bits (43), Expect = 1e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
||||||||||||||||||||||||||| | ||||||||||| |||||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctagcattacccatattcatatggatgttaatgaatctag 74
Score = 75.8 bits (38), Expect = 1e-13
Identities = 44/46 (95%)
Strand = Plus / Minus
Query: 65 atatgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
||||||| ||||||||||||| ||||||||||||||||||||||||
Sbjct: 50 atatgggtaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 63.9 bits (32), Expect = 4e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 71 gaaatgctagaatgatttacattgtgaaacggaggaagta 110
||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 119 gaaatgctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa
Japonica Group
Length = 160
Score = 93.7 bits (47), Expect = 5e-19
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctag 74
Score = 69.9 bits (35), Expect = 7e-12
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 47 tgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 69.9 bits (35), Expect = 7e-12
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 114 tgggaaatgctagaatgacttatattgtgaaacggaggaagta 156
Score = 67.9 bits (34), Expect = 3e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaa 55
||||||||| ||||||||||||||||||| || || |||||||||||||||||
Sbjct: 145 tttcacaatataagtcattctagcatttcccacgtttatattgatgttaatgaa 92
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 93.7 bits (47), Expect = 5e-19
Identities = 62/67 (92%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
|||||||||||||||||||||||||||| |||||||||||||||||||||||| |||
Sbjct: 16 tttcacaatgtaagtcattctagcattttccatattcatattgatgttaatgaatctata 75
Query: 62 catatat 68
|||||||
Sbjct: 76 catatat 82
Score = 93.7 bits (47), Expect = 5e-19
Identities = 56/59 (94%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||
Sbjct: 147 tttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctag 89
Score = 79.8 bits (40), Expect = 7e-15
Identities = 43/44 (97%)
Strand = Plus / Plus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagtag 111
|||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 116 tgggaaatgctagaatgacttacattgtgaaacggaggaagtag 159
Score = 67.9 bits (34), Expect = 3e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 65 atatgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||| |||||||||||||| ||||||||||||||||||| ||||
Sbjct: 50 atatggaaaatgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 93.7 bits (47), Expect = 5e-19
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||||||||||||||||||||||||||| || ||||||| ||||||||||||| ||||
Sbjct: 151 tttcacaatgtaagtcattctagcatttcccacattcatagtgatgttaatgaatctaga 92
Query: 62 catatat 68
|||||||
Sbjct: 91 catatat 85
Score = 75.8 bits (38), Expect = 1e-13
Identities = 44/46 (95%)
Strand = Plus / Minus
Query: 65 atatgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
||||| ||||||||||||||| ||||||||||||||||||||||||
Sbjct: 50 atatgcgaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 71.9 bits (36), Expect = 2e-12
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcata 41
||||||||||||||||||||||||||||| ||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcgcatattcata 55
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagtag 111
|||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 120 tgggaaatgctagaatgacttacattgtgaaacggagggagtag 163
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 93.7 bits (47), Expect = 5e-19
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||||||| ||||||||| ||||||||| |||||||||||||||||||||||| ||||
Sbjct: 138 tttcacaatataagtcattttagcatttcccatattcatattgatgttaatgaatctaga 79
Query: 62 catatat 68
|||||||
Sbjct: 78 catatat 72
Score = 60.0 bits (30), Expect = 6e-09
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 65 atatgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
||||||||||||||| ||||| ||| ||||||||||||||| ||||
Sbjct: 104 atatgggaaatgctaaaatgacttatattgtgaaacggagggagta 149
Score = 54.0 bits (27), Expect = 4e-07
Identities = 40/43 (93%), Gaps = 1/43 (2%)
Strand = Plus / Minus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
||||||||||||||| || |||||||||||||| |||||||||
Sbjct: 46 tgggaaatgctagaa-gacttacattgtgaaacagaggaagta 5
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 93.7 bits (47), Expect = 5e-19
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcctatattcatattgatgttaatgaatctag 74
Score = 75.8 bits (38), Expect = 1e-13
Identities = 44/46 (95%)
Strand = Plus / Minus
Query: 65 atatgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||| |||||||||||||||| ||||||||||||||||||||||||
Sbjct: 50 atataggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 67.9 bits (34), Expect = 3e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaa 55
|||||||||||||||||||||||||| | | |||||||||||||||||||||
Sbjct: 147 tttcacaatgtaagtcattctagcatattccgcattcatattgatgttaatgaa 94
Score = 58.0 bits (29), Expect = 3e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 74 atgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||| ||||||||||||||||||| ||||
Sbjct: 122 atgctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 93.7 bits (47), Expect = 5e-19
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctag 74
Score = 77.8 bits (39), Expect = 3e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
|||||||||||||||||||||| ||||| || ||||||||||||||||||||| |||
Sbjct: 147 tttcacaatgtaagtcattctaatatttcccacattcatattgatgttaatgaatgtaga 88
Query: 62 catatat 68
|||||||
Sbjct: 87 catatat 81
Score = 69.9 bits (35), Expect = 7e-12
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 47 tgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 63.9 bits (32), Expect = 4e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagtag 111
|||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 116 tgggaaatattagaatgacttacattgtgaaacggaggaagtag 159
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa
Indica Group
Length = 162
Score = 93.7 bits (47), Expect = 5e-19
Identities = 62/67 (92%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||||||||||||||||||||||||||| || ||||||| ||||||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatagtgatgttaatgaatctaga 75
Query: 62 catatat 68
|||||||
Sbjct: 76 catatat 82
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagtag 111
|||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 47 tgggaaatgctagaatgacttacattgtgaaacggagggagtag 4
Score = 67.9 bits (34), Expect = 3e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaa 55
|||||||||||||||||||||| ||||| || |||||||||||| ||||||||
Sbjct: 147 tttcacaatgtaagtcattctaacattttccacattcatattgatattaatgaa 94
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagta 110
||||| |||||||| ||||||||||||||||||| ||||
Sbjct: 120 aaatgttagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 93.7 bits (47), Expect = 5e-19
Identities = 99/115 (86%), Gaps = 6/115 (5%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatg----aacc 57
||||||||||||||||||||||||||||| || |||||||| |||||||||| |||
Sbjct: 119 tttcacaatgtaagtcattctagcatttcccacattcatatcgatgttaatgagttaaca 60
Query: 58 taggcat--atatgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
| | || || |||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 59 tcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 93.7 bits (47), Expect = 5e-19
Identities = 99/115 (86%), Gaps = 6/115 (5%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaa----tgaacc 57
||||||||||||||||||||||||||||| || |||||||| |||||||| | |||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatatcgatgttaactcattaaca 75
Query: 58 taggcat--atatgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
| | || || |||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 76 tcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 130
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 91.7 bits (46), Expect = 2e-18
Identities = 52/54 (96%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaa 55
||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaa 69
Score = 83.8 bits (42), Expect = 4e-16
Identities = 51/54 (94%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaa 55
||||||||||||| ||||||||||||||| || |||||||||||||||||||||
Sbjct: 130 tttcacaatgtaattcattctagcatttctcacattcatattgatgttaatgaa 77
Score = 77.8 bits (39), Expect = 3e-14
Identities = 42/43 (97%)
Strand = Plus / Minus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 47 tgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 63.9 bits (32), Expect = 4e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 71 gaaatgctagaatgatttacattgtgaaacggaggaagta 110
||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 102 gaaatgctagaatgaattacattgtgaaacggagggagta 141
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa Indica
Group
Length = 153
Score = 91.7 bits (46), Expect = 2e-18
Identities = 52/54 (96%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaa 55
||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 138 tttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaa 85
Score = 75.8 bits (38), Expect = 1e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaa 55
||||| |||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 16 tttcataatgtaagtcattctagcattttccacattcatattgatgttaatgaa 69
Score = 63.9 bits (32), Expect = 4e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagtag 111
|||||||||||||| ||||||| |||||||||||||||||
Sbjct: 43 aaatgctagaatgacttacattatgaaacggaggaagtag 4
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 71 gaaatgctagaatgatttacattgtgaaacggaggaagtag 111
||||||||||||||| |||||||||||||| |||| |||||
Sbjct: 110 gaaatgctagaatgacttacattgtgaaaccgagggagtag 150
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 91.7 bits (46), Expect = 2e-18
Identities = 52/54 (96%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaa 55
|||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcattttccatattcatattgatgttaatgaa 69
Score = 83.8 bits (42), Expect = 4e-16
Identities = 98/115 (85%), Gaps = 5/115 (4%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgtta---atgaacct 58
||||| |||||||||||||||||||||| ||||||||||||||||| | || ||| |
Sbjct: 118 tttcataatgtaagtcattctagcattttccatattcatattgatgtaattcattaacat 59
Query: 59 aggcat--atatgggaaatgctagaatgatttacattgtgaaacggaggaagtag 111
|| |||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 58 caatatgaatatggaaaatgctagaatgacttacattgtgaaacggaggaagtag 4
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 91.7 bits (46), Expect = 2e-18
Identities = 52/54 (96%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaa 55
||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 119 tttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaa 66
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaat 52
||||||||| ||||||||| |||||||| || ||||||||||||||||||
Sbjct: 12 tttcacaatataagtcattatagcattttccacattcatattgatgttaat 62
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||||||| |||||||||||||| |||| ||||
Sbjct: 88 tgggaaatgctagaatgacttacattgtgaaacagagggagta 130
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 91.7 bits (46), Expect = 2e-18
Identities = 95/109 (87%), Gaps = 3/109 (2%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||||||| ||||||||||||||||||| || ||| ||| ||||||||||||| || |
Sbjct: 110 tttcacaatctaagtcattctagcatttcccacatttatactgatgttaatgaaa-tatg 52
Query: 62 catatatgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|| | ||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 51 aatgt--gggaaatgctaaaatgacttacattgtgaaacggaggaagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||||||| ||| ||||||||||||||| ||||
Sbjct: 79 tgggaaatgctagaatgacttagattgtgaaacggagggagta 121
Score = 60.0 bits (30), Expect = 6e-09
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatatt 43
||||||||||||||||||| ||||||||| || |||||||||
Sbjct: 16 tttcacaatgtaagtcattttagcatttcccacattcatatt 57
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 91.7 bits (46), Expect = 2e-18
Identities = 52/54 (96%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaa 55
||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 137 tttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaa 84
Score = 85.7 bits (43), Expect = 1e-16
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||||||||||||||||||||||||||| || ||| ||||| ||||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacatttatattaatgttaatgaatctaga 75
Query: 62 catatat 68
|||||||
Sbjct: 76 catatat 82
Score = 77.8 bits (39), Expect = 3e-14
Identities = 42/43 (97%)
Strand = Plus / Minus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 47 tgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacgg 102
|||||||||||||||||| ||||||||||||||||
Sbjct: 106 tgggaaatgctagaatgacttacattgtgaaacgg 140
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 91.7 bits (46), Expect = 2e-18
Identities = 100/120 (83%), Gaps = 11/120 (9%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||||||||||||||||||||||||||| || ||||||||| || |||||||| ||||
Sbjct: 124 tttcacaatgtaagtcattctagcatttcccacattcatatttatattaatgaatctaga 65
Query: 62 catata-----------tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||| |||||||||||||||||| ||||||||||||| ||||| ||||
Sbjct: 64 catatataatatgaatgtgggaaatgctagaatgacttacattgtgaaatggagggagta 5
Score = 77.8 bits (39), Expect = 3e-14
Identities = 42/43 (97%)
Strand = Plus / Plus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 93 tgggaaatgctagaatgacttacattgtgaaacggaggaagta 135
Score = 67.9 bits (34), Expect = 3e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatatt 43
||||||||||||||||||||||||||||| || |||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatatt 57
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 89.7 bits (45), Expect = 7e-18
Identities = 99/118 (83%), Gaps = 8/118 (6%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||||||| |||||||||||||||| || || ||||||||||||||||||||| |||
Sbjct: 121 tttcacaatataagtcattctagcatatcccacattcatattgatgttaatgaatctaaa 62
Query: 62 cat--------atatgggaaatgctagaatgatttacattgtgaaacggaggaagtag 111
||| || ||| |||||||||||||| ||||||||||||||||||| |||||
Sbjct: 61 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggagggagtag 4
Score = 71.9 bits (36), Expect = 2e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgtt 49
|||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcattttccacattcatattgatgtt 63
Score = 63.9 bits (32), Expect = 4e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagtag 111
||||| |||||||||||| ||| |||||||||||||||||||||
Sbjct: 90 tgggatatgctagaatgacttatattgtgaaacggaggaagtag 133
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 89.7 bits (45), Expect = 7e-18
Identities = 94/110 (85%), Gaps = 9/110 (8%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||| ||||||||||||||||||||||| || |||||||||||| |||||||| ||||
Sbjct: 104 tttcataatgtaagtcattctagcatttcccacattcatattgatattaatgaatctag- 46
Query: 62 catatatgggaaatgctagaatgatttacattgtgaaacggaggaagtag 111
|||| |||||||||||| ||||||||||||||||||| |||||
Sbjct: 45 -atat-------atgctagaatgacttacattgtgaaacggagggagtag 4
Score = 69.9 bits (35), Expect = 7e-12
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 73 tgggaaatgctagaatgacttacattatgaaacggaggaagta 115
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcat 27
||||||||||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcat 41
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 89.7 bits (45), Expect = 7e-18
Identities = 98/116 (84%), Gaps = 6/116 (5%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||| ||||||||||||||||| ||||| || ||||||||||||||||||||| ||||
Sbjct: 16 tttcataatgtaagtcattctagtatttctcacattcatattgatgttaatgaatctaga 75
Query: 62 catata------tgggaaatgctagaatgatttacattgtgaaacggaggaagtag 111
|| ||| || ||||||||||||||| ||||||| ||||| ||||| |||||
Sbjct: 76 caaatatgaatgtgagaaatgctagaatgacttacattatgaaatggagggagtag 131
Score = 60.0 bits (30), Expect = 6e-09
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatatt 43
||||| ||||||||||||||||||||||| || |||||||||
Sbjct: 119 tttcataatgtaagtcattctagcatttctcacattcatatt 78
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 71 gaaatgctagaatgatttacattgtgaaacggaggaagta 110
||||| ||||||||| ||||||| ||||||||||||||||
Sbjct: 44 gaaatactagaatgacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 89.7 bits (45), Expect = 7e-18
Identities = 100/118 (84%), Gaps = 9/118 (7%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||||||||||||| |||||||||||| || |||||||||||||||| |||| |||
Sbjct: 16 tttcacaatgtaagttattctagcattttccacattcatattgatgtta-tgaatctaaa 74
Query: 62 cat--------atatgggaaatgctagaatgatttacattgtgaaacggaggaagtag 111
||| |||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 75 catcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggaggaagtag 132
Score = 79.8 bits (40), Expect = 7e-15
Identities = 46/48 (95%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgtt 49
|||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 120 tttcacaatgtaagtcattctagcattttccatattcatattgatgtt 73
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||| | ||||||||||||||||||| ||||
Sbjct: 43 aaatgctagaataacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 87.7 bits (44), Expect = 3e-17
Identities = 98/117 (83%), Gaps = 8/117 (6%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||| ||||||||||||||||||||| |||| |||||||| |||||||||||| ||||
Sbjct: 121 tttcataatgtaagtcattctagcattgcacacattcatatagatgttaatgaatctaga 62
Query: 62 cat--------atatgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
||| |||| || ||||||||||||| ||||||| ||||||||||| ||||
Sbjct: 61 catatatatgaatataggtaatgctagaatgacttacattatgaaacggagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 73 aatgctagaatgatttacattgtgaaacggaggaagta 110
||||||||||||| ||||||| ||||| ||||||||||
Sbjct: 95 aatgctagaatgacttacattatgaaatggaggaagta 132
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatat 42
||||| ||||||||||||||||||||| | ||||||||||
Sbjct: 16 tttcataatgtaagtcattctagcattacctatattcatat 56
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 87.7 bits (44), Expect = 3e-17
Identities = 98/117 (83%), Gaps = 8/117 (6%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||||||| ||||||||| |||||||| | |||||||||||||| ||||||| ||||
Sbjct: 121 tttcacaatataagtcattttagcattttccgtattcatattgatgataatgaatctaga 62
Query: 62 catatat--------gggaaatgctagaatgatttacattgtgaaacggaggaagta 110
||||||| ||||||||||||||||| |||||||||||||| ||| |||||
Sbjct: 61 catatatatgaatgcgggaaatgctagaatgacttacattgtgaaacagagaaagta 5
Score = 58.0 bits (29), Expect = 3e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttc 30
|||||||||||||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttc 44
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagt 109
|||||||| ||||| ||| |||||||||||||||||||
Sbjct: 94 aaatgctaaaatgacttatattgtgaaacggaggaagt 131
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa Japonica
Group
Length = 132
Score = 87.7 bits (44), Expect = 3e-17
Identities = 96/113 (84%), Gaps = 4/113 (3%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacc---- 57
||||||||| ||||||||||||| ||||| |||||| ||||||||| ||||||| |
Sbjct: 16 tttcacaatataagtcattctagtatttctcatatttatattgatgataatgaatctaga 75
Query: 58 taggcatatatgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
||| ||||||| ||||||||| ||||| ||||||| ||||||||||| ||||
Sbjct: 76 tagatatatatgtgaaatgctacaatgacttacattatgaaacggagggagta 128
Score = 60.0 bits (30), Expect = 6e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 65 atatgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
||||| ||||| ||||||||| ||| ||||||||||||||||||||
Sbjct: 50 atatgagaaatactagaatgacttatattgtgaaacggaggaagta 5
Score = 54.0 bits (27), Expect = 4e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatat 36
||||| ||||||||||||| |||||||||||||||
Sbjct: 117 tttcataatgtaagtcattgtagcatttcacatat 83
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa Japonica
Group
Length = 146
Score = 87.7 bits (44), Expect = 3e-17
Identities = 50/52 (96%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatg 53
||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 131 tttcacaatgtaagtcattctagcatttcccatattcatattgatgtcaatg 80
Score = 85.7 bits (43), Expect = 1e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
||||||||||||||||||||||||||||| || |||||||||||| |||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttctcacattcatattgatattaatgaatctag 74
Score = 83.8 bits (42), Expect = 4e-16
Identities = 45/46 (97%)
Strand = Plus / Plus
Query: 65 atatgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 97 atatgggaaatgctagaatgacttacattgtgaaacggaggaagta 142
Score = 63.9 bits (32), Expect = 4e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 71 gaaatgctagaatgatttacattgtgaaacggaggaagta 110
||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 85.7 bits (43), Expect = 1e-16
Identities = 61/67 (91%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||| ||||||||||||||||||||||| || ||||||||||||||||||| | ||||
Sbjct: 118 tttcataatgtaagtcattctagcatttcccacattcatattgatgttaatggatctaga 59
Query: 62 catatat 68
|||||||
Sbjct: 58 catatat 52
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagtag 111
|||||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 87 tgggaaatgctagaatgacttacattatgaaacggaggaagtag 130
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa
Japonica Group
Length = 162
Score = 85.7 bits (43), Expect = 1e-16
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
|||||||||||||||||||||| |||||| || |||||||||||| |||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctatcatttcccacattcatattgatattaatgaatctaga 75
Query: 62 catatat 68
|||||||
Sbjct: 76 catatat 82
Score = 71.9 bits (36), Expect = 2e-12
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 71 gaaatgctagaatgatttacattgtgaaacggaggaagta 110
||||||||||||||| ||||||||||||||||||||||||
Sbjct: 119 gaaatgctagaatgacttacattgtgaaacggaggaagta 158
Score = 65.9 bits (33), Expect = 1e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatat 42
||||||||||||||||||||||||||||| || ||||||||
Sbjct: 147 tttcacaatgtaagtcattctagcatttctcacattcatat 107
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
||||||||| |||||||| ||||||||||||||||||| ||||
Sbjct: 47 tgggaaatgatagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 85.7 bits (43), Expect = 1e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
||||||||||||||||||||||||||||| || ||||||||||| ||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatattgacgttaatgaatctag 74
Score = 77.8 bits (39), Expect = 3e-14
Identities = 42/43 (97%)
Strand = Plus / Minus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 47 tgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 48.1 bits (24), Expect = 2e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagtag 111
|||||||| ||| ||||| ||| ||||||||||||||| |||||
Sbjct: 116 tgggaaattctaaaatgacttagattgtgaaacggagggagtag 159
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 85.7 bits (43), Expect = 1e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
||||||||||||||||||||||||||||| || |||||||||||||| |||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatattgatgtcaatgaatctag 74
Score = 77.8 bits (39), Expect = 3e-14
Identities = 42/43 (97%)
Strand = Plus / Minus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 47 tgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 71.9 bits (36), Expect = 2e-12
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgtt 49
||||| ||||||||||||||||||||||| || |||||||||||||||
Sbjct: 124 tttcataatgtaagtcattctagcatttcccacattcatattgatgtt 77
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 85.7 bits (43), Expect = 1e-16
Identities = 49/51 (96%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaat 52
||||||||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 134 tttcacaatgtaagtcattctagcatttctcatatttatattgatgttaat 84
Score = 69.9 bits (35), Expect = 7e-12
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 47 tgggaaatgctaaaatgacttacattgtgaaacggaggaagta 5
Score = 67.9 bits (34), Expect = 3e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatg 47
||||||||||||||||||| ||||||||| || |||||||||||||
Sbjct: 16 tttcacaatgtaagtcattttagcatttcccacattcatattgatg 61
Score = 67.9 bits (34), Expect = 3e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 65 atatgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
||||| ||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 100 atatgagaaatgctagaatgacttacattgtgaaacggagggagta 145
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa
Japonica Group
Length = 162
Score = 85.7 bits (43), Expect = 1e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
||||||||||||||||||||||||||||| || |||||||||| |||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatattgttgttaatgaatctag 74
Score = 69.9 bits (35), Expect = 7e-12
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 47 tgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 69.9 bits (35), Expect = 7e-12
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||| |||||||||||||| | |||||| || ||||||||||||| ||||||| ||||
Sbjct: 147 tttcataatgtaagtcattccaccatttcccacattcatattgatggtaatgaatctaga 88
Query: 62 catatat 68
|||||||
Sbjct: 87 catatat 81
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 85.7 bits (43), Expect = 1e-16
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||||||||||||||||||||||||||| || ||| |||||| |||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacatttatattggtgttaatgaatctaga 75
Query: 62 catatat 68
|||||||
Sbjct: 76 catatat 82
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagtag 111
|||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 47 tgggaaatgctagaatgacttacattgtgaaacggagggagtag 4
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 5 cacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaa 55
|||||| |||||||||||||||||| || |||||||||||| ||||||||
Sbjct: 144 cacaatataagtcattctagcatttttcacattcatattgatattaatgaa 94
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||| ||| |||||| |||||||| ||||
Sbjct: 120 aaatgctagaatgacttatattgtggaacggagggagta 158
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa
Indica Group
Length = 162
Score = 85.7 bits (43), Expect = 1e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
|||||||||||||||||||||| |||||| || ||||||||||||||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctaccatttctcacattcatattgatgttaatgaatctag 74
Score = 69.9 bits (35), Expect = 7e-12
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
|||||||||||||||||||||||||||| | |||||| ||||| |||||||| ||||
Sbjct: 147 tttcacaatgtaagtcattctagcattttctaaattcatgttgatattaatgaatctaga 88
Query: 62 catatat 68
|||||||
Sbjct: 87 catatat 81
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||| ||||||||||||||||||| ||||
Sbjct: 120 aaatgctagaatgacttacattgtgaaacggagggagta 158
Score = 50.1 bits (25), Expect = 6e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 71 gaaatgctagaatgatttacattgtgaaacgga 103
|||||| |||||||| |||||||||||||||||
Sbjct: 44 gaaatggtagaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 85.7 bits (43), Expect = 1e-16
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
|||||||||||||||||||||| |||||| || |||||||||||| |||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctaacatttcccacattcatattgatattaatgaatctaga 75
Query: 62 catatat 68
|||||||
Sbjct: 76 catatat 82
Score = 69.9 bits (35), Expect = 7e-12
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
||||||||||||||||||||||| |||| || |||||||||||| |||||||| ||||
Sbjct: 147 tttcacaatgtaagtcattctagtatttttcacattcatattgattttaatgaatctag 89
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
||||||||| |||||||| ||||||||||||||||||| ||||
Sbjct: 47 tgggaaatgttagaatgacttacattgtgaaacggagggagta 5
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagta 110
|||| ||||||||| ||||||||||||||||||| ||||
Sbjct: 120 aaatactagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 85.7 bits (43), Expect = 1e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
|||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||
Sbjct: 147 tttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaatctag 89
Score = 69.9 bits (35), Expect = 7e-12
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
|||||||||||| |||||||||||||| || |||||||| |||| ||||||| |||||
Sbjct: 16 tttcacaatgtatgtcattctagcattgtccacattcatatagatgctaatgaatctagg 75
Query: 62 catatat 68
|||||||
Sbjct: 76 catatat 82
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||| ||||||||||||||||||| ||||
Sbjct: 120 aaatgctagaatgacttacattgtgaaacggagggagta 158
Score = 60.0 bits (30), Expect = 6e-09
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 73 aatgctagaatgatttacattgtgaaacggaggaagta 110
||||||||||||| |||||||||||||||||||||||
Sbjct: 42 aatgctagaatgacatacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa
Japonica Group
Length = 156
Score = 85.7 bits (43), Expect = 1e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
||||||||||||||||||||||||||||| || ||||||||||||| ||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatattgatgctaatgaatctag 74
Score = 77.8 bits (39), Expect = 3e-14
Identities = 42/43 (97%)
Strand = Plus / Minus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 47 tgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 77.8 bits (39), Expect = 3e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||||||| ||||||||||||||||||| | ||||||||||||| ||||||| ||||
Sbjct: 141 tttcacaatataagtcattctagcatttcctacattcatattgatgctaatgaatctaga 82
Query: 62 catatat 68
|||||||
Sbjct: 81 catatat 75
Score = 60.0 bits (30), Expect = 6e-09
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 70 ggaaatgctagaatgatttacattgtgaaacggaggaagtag 111
|||||||||||||||| ||| ||||||||||||||| |||||
Sbjct: 112 ggaaatgctagaatgacttatattgtgaaacggagggagtag 153
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa
Japonica Group
Length = 138
Score = 85.7 bits (43), Expect = 1e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
|||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaatctag 74
Score = 63.9 bits (32), Expect = 4e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagtag 111
|||||||||||||| ||||||||||||||||||| |||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggagggagtag 4
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa
Japonica Group
Length = 162
Score = 85.7 bits (43), Expect = 1e-16
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||||||||||||||||| ||||||| | || ||||||||||||||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattatagcattacccacattcatattgatgttaatgaatctaga 75
Query: 62 catatat 68
|||||||
Sbjct: 76 catatat 82
Score = 69.9 bits (35), Expect = 7e-12
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
||||||||| ||||||||| ||||||||| || ||||||||| ||||||||||| ||||
Sbjct: 147 tttcacaatataagtcattttagcatttcccacattcatattaatgttaatgaatctag 89
Score = 63.9 bits (32), Expect = 4e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagtag 111
|||||||||||| ||||| ||| |||||||||||||||||||||
Sbjct: 116 tgggaaatgctaaaatgacttatattgtgaaacggaggaagtag 159
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagtag 111
|||| ||||||| ||||| ||||||||||||||||||| |||||
Sbjct: 47 tgggtaatgctataatgacttacattgtgaaacggagggagtag 4
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa
Japonica Group
Length = 142
Score = 85.7 bits (43), Expect = 1e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
|||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctagcattttctatattcatattgatgttaatgaatctag 74
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||| ||||||||||||||||||| ||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 54.0 bits (27), Expect = 4e-07
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaat 52
||||||||| |||||||||||| ||||| | ||||||||||||||||||
Sbjct: 127 tttcacaatataagtcattctactatttcctacattcatattgatgttaat 77
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 85.7 bits (43), Expect = 1e-16
Identities = 61/67 (91%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||||||||||||||||||||| ||||| || |||||||||| |||||||||| ||||
Sbjct: 147 tttcacaatgtaagtcattctagtatttcccacattcatattgttgttaatgaatctaga 88
Query: 62 catatat 68
|||||||
Sbjct: 87 catatat 81
Score = 77.8 bits (39), Expect = 3e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
|||||||||||||||||||||||||||| || || |||||||||||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctagcattttccacatccatattgatgttaatgaatctag 74
Score = 69.9 bits (35), Expect = 7e-12
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||| ||||||||||||||||||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||| ||||||||| ||||||||||||||||||| ||||
Sbjct: 116 tgggaaatactagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 83.8 bits (42), Expect = 4e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||||||||||||||||||||||||||| || ||||||||| |||| |||||| ||||
Sbjct: 127 tttcacaatgtaagtcattctagcatttctcacattcatatttatgtcaatgaatctaga 68
Query: 62 catata 67
||||||
Sbjct: 67 catata 62
Score = 77.8 bits (39), Expect = 3e-14
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgt 48
||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttctcacattcatattgatgt 62
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 71 gaaatgctagaatgatttacattgtgaaacggagg 105
||||||||||||||| |||||||||||||||||||
Sbjct: 99 gaaatgctagaatgacttacattgtgaaacggagg 133
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa
Indica Group
Length = 143
Score = 83.8 bits (42), Expect = 4e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattttagcatttctcatatttatattgatgctaatgaatctaga 75
Query: 62 catata 67
||||||
Sbjct: 76 catata 81
Score = 67.9 bits (34), Expect = 3e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 65 atatgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
||||| ||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 50 atatgagaaatgctaaaatgacttacattgtgaaacggaggaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatg 47
||||||||| ||||||||| |||||||| || |||||||||||||
Sbjct: 128 tttcacaatataagtcattttagcattttccacattcatattgatg 83
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 83.8 bits (42), Expect = 4e-16
Identities = 45/46 (97%)
Strand = Plus / Plus
Query: 65 atatgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 92 atatgggaaatgctagaatgacttacattgtgaaacggaggaagta 137
Score = 81.8 bits (41), Expect = 2e-15
Identities = 44/45 (97%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgat 46
||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 126 tttcacaatgtaagtcattctagcatttcccatattcatattgat 82
>RF00906;MIR1122;AACV01006750.1/48875-49000 39947:Oryza sativa
Japonica Group
Length = 126
Score = 83.8 bits (42), Expect = 4e-16
Identities = 93/109 (85%), Gaps = 2/109 (1%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||||||||||||||||| ||||||||| |||||| ||||||||||||| | | |
Sbjct: 16 tttcacaatgtaagtcattttagcatttctcatatttatattgatgttaa--catcaata 73
Query: 62 catatatgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
| ||||| ||||||||| ||||| ||| ||||||||||||||||||||
Sbjct: 74 taaatatgagaaatgctaaaatgacttatattgtgaaacggaggaagta 122
Score = 75.8 bits (38), Expect = 1e-13
Identities = 92/109 (84%), Gaps = 2/109 (1%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||||||| ||||||||| ||||||||| |||||| ||||||||||||| | | |
Sbjct: 111 tttcacaatataagtcattttagcatttctcatatttatattgatgttaa--catcaata 54
Query: 62 catatatgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
| ||||| ||||||||| ||||| ||||||||||||||||||| ||||
Sbjct: 53 taaatatgagaaatgctaaaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa
Japonica Group
Length = 140
Score = 83.8 bits (42), Expect = 4e-16
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaa 55
|||||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctaacattttccatattcatattgatgttaatgaa 69
Score = 67.9 bits (34), Expect = 3e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 65 atatgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||| ||||| |||||||| ||||||||||||||||||||||||
Sbjct: 50 atatggaaaatgttagaatgacttacattgtgaaacggaggaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatg 47
||||| ||||||||||||| ||| |||| ||||||||||||||||
Sbjct: 125 tttcataatgtaagtcattttagtatttttcatattcatattgatg 80
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 83.8 bits (42), Expect = 4e-16
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaa 55
||||||||||||||||||||||||||||| || ||||||||||||| |||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatattgatggtaatgaa 69
Score = 77.8 bits (39), Expect = 3e-14
Identities = 42/43 (97%)
Strand = Plus / Minus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 47 tgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 77.8 bits (39), Expect = 3e-14
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaat 52
|||||||| |||||||||||||||||||| || ||||||||||||||||||
Sbjct: 126 tttcacaaagtaagtcattctagcatttcccacattcatattgatgttaat 76
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||||||| |||| |||||||||||||| ||||
Sbjct: 95 tgggaaatgctagaatgacttactttgtgaaacggagggagta 137
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 83.8 bits (42), Expect = 4e-16
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaa 55
||||||||||||||||||||||||||||| || ||||||||||||| |||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatattgatgctaatgaa 69
Score = 75.8 bits (38), Expect = 1e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaa 55
||||| ||||||||||||||||||||||| || ||||||||||||| |||||||
Sbjct: 127 tttcataatgtaagtcattctagcatttcccacattcatattgatgctaatgaa 74
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagtag 111
|||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 47 tgggaaatgctagaatgacttacattgtgaaacggagggagtag 4
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa
Japonica Group
Length = 144
Score = 83.8 bits (42), Expect = 4e-16
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaa 55
|||||||||||||||||||||| |||||| || |||||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaa 69
Score = 58.0 bits (29), Expect = 3e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggag 104
||||||||| |||||||| ||||||||||||||||||
Sbjct: 47 tgggaaatgttagaatgacttacattgtgaaacggag 11
Score = 58.0 bits (29), Expect = 3e-08
Identities = 51/59 (86%), Gaps = 7/59 (11%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
||||||||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 132 tttcacaatgtaagtcattctagcatt-------ttcatattgatgttaatgaatctag 81
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 72 aaatgctagaatgatttacattgtgaaacggag 104
|||||||||||||| ||||||||||||||||||
Sbjct: 105 aaatgctagaatgacttacattgtgaaacggag 137
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 83.8 bits (42), Expect = 4e-16
Identities = 51/54 (94%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaa 55
||||||||||||||||||| ||||||||| || |||||||||||||||||||||
Sbjct: 123 tttcacaatgtaagtcattttagcatttcccacattcatattgatgttaatgaa 70
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagtag 111
|||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 92 tgggaaatgctaaaatgacttacattgtgaaacggaggaagtag 135
Score = 54.0 bits (27), Expect = 4e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgt 48
||||||||||||||||||| | |||||| || ||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattttggcattttccacattcatattgatgt 62
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 83.8 bits (42), Expect = 4e-16
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaa 55
|||||||||| |||||||||||||||||| || |||||||||||||||||||||
Sbjct: 16 tttcacaatgcaagtcattctagcatttcccacattcatattgatgttaatgaa 69
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagtag 111
|||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 47 tgggaaatgctagaatgacttgcattgtgaaacggaggaagtag 4
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 83.8 bits (42), Expect = 4e-16
Identities = 51/54 (94%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaa 55
||||||||| ||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 129 tttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaa 76
Score = 77.8 bits (39), Expect = 3e-14
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaat 52
||||||||||||||||||||||||||||| || ||||||||| ||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatattaatgttaat 66
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||||||| ||| ||||||||||||||| ||||
Sbjct: 98 tgggaaatgctagaatgacttatattgtgaaacggagggagta 140
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 81.8 bits (41), Expect = 2e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 4 tcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
||||||||||||||||||||||||||| || |||||||||||| |||||||| ||||
Sbjct: 145 tcacaatgtaagtcattctagcatttcccacattcatattgatattaatgaatctag 89
Score = 77.8 bits (39), Expect = 3e-14
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||||||||||||||||| | ||||||| || ||| ||||||||||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcatttttgcatttcccacatttatattgatgttaatgaatctaga 75
Query: 62 catatat 68
|||||||
Sbjct: 76 catatat 82
Score = 63.9 bits (32), Expect = 4e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagtag 111
|||||||||||||||||| ||||||||||| ||||||| |||||
Sbjct: 116 tgggaaatgctagaatgacttacattgtgatacggagggagtag 159
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||| | ||||| ||||||||||||||||||||||||
Sbjct: 47 tgggaaatgcaaaaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa Indica
Group
Length = 150
Score = 81.8 bits (41), Expect = 2e-15
Identities = 47/49 (95%)
Strand = Plus / Minus
Query: 5 cacaatgtaagtcattctagcatttcacatattcatattgatgttaatg 53
|||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 132 cacaatgtaagtcattctagcatttcccacattcatattgatgttaatg 84
Score = 79.8 bits (40), Expect = 7e-15
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatg 53
|||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcattttccacattcatattgatgttaatg 67
Score = 69.9 bits (35), Expect = 7e-12
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||||||| |||||||||| |||||||||||||
Sbjct: 104 tgggaaatgctagaatgacttacattgtggaacggaggaagta 146
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||| ||||||||||||||||||| ||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 79.8 bits (40), Expect = 7e-15
Identities = 101/122 (82%), Gaps = 12/122 (9%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag- 60
||||| ||||||||||||||||| ||||| |||||||||||||||| ||||||| ||||
Sbjct: 125 tttcataatgtaagtcattctagtatttcccatattcatattgatgctaatgaatctaga 66
Query: 61 ---gcat--------atatgggaaatgctagaatgatttacattgtgaaacggaggaagt 109
|||| ||||| ||||| ||||||| | |||||||||||||||||||||||
Sbjct: 65 ctagcatcaatatgaatatgagaaatactagaattacttacattgtgaaacggaggaagt 6
Query: 110 ag 111
||
Sbjct: 5 ag 4
Score = 67.9 bits (34), Expect = 3e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatg 47
||||||||||||||| ||||||| ||||| ||||||||||||||||
Sbjct: 16 tttcacaatgtaagtaattctagtatttctcatattcatattgatg 61
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 65 atatgggaaatgctagaatgatttacattgtgaaacggaggaagtag 111
||||||||||| ||||||||| ||||||| ||||||||||| |||||
Sbjct: 91 atatgggaaatactagaatgacttacattatgaaacggagggagtag 137
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
Group
Length = 148
Score = 79.8 bits (40), Expect = 7e-15
Identities = 46/48 (95%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgtt 49
||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 133 tttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 86
Score = 79.8 bits (40), Expect = 7e-15
Identities = 43/44 (97%)
Strand = Plus / Plus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagtag 111
|||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 102 tgggaaatgctagaatgacttacattgtgaaacggaggaagtag 145
Score = 75.8 bits (38), Expect = 1e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaa 55
|||||||||||||| |||||||||||||| || ||||||||||||||| |||||
Sbjct: 16 tttcacaatgtaagccattctagcatttcccacattcatattgatgttcatgaa 69
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 47 tgggaaatgctagaatggcttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 79.8 bits (40), Expect = 7e-15
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 13 aagtcattctagcatttcacatattcatattgatgttaatgaacctaggcatatat 68
|||||||||||||||||| || ||||||||||||||||||||| |||| |||||||
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatatat 55
Score = 71.9 bits (36), Expect = 2e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 13 aagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
|||||||||||||||||| || ||||||||||||||||||||| ||||
Sbjct: 1 aagtcattctagcatttctcacattcatattgatgttaatgaatctag 48
>RF00906;MIR1122;AAAA02003905.1/23139-23041 39946:Oryza sativa
Indica Group
Length = 99
Score = 79.8 bits (40), Expect = 7e-15
Identities = 43/44 (97%)
Strand = Plus / Plus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagtag 111
|||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 53 tgggaaatgctagaatgacttacattgtgaaacggaggaagtag 96
Score = 63.9 bits (32), Expect = 4e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcata 41
||||||||||||||||||||||||||||| || |||||||
Sbjct: 84 tttcacaatgtaagtcattctagcatttcccacattcata 45
Score = 58.0 bits (29), Expect = 3e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttc 30
|||||||||||||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttc 44
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 71 gaaatgctagaatgatttacattgtgaaacggaggaagta 110
||||||||||||||| |||||||||||||| |||| ||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacagagggagta 5
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 79.8 bits (40), Expect = 7e-15
Identities = 99/121 (81%), Gaps = 12/121 (9%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
|||||||||| |||||||| ||||||||| ||||||||||||||||||||| || ||||
Sbjct: 125 tttcacaatgcaagtcattttagcatttcccatattcatattgatgttaataaatctaga 66
Query: 62 cat------------atatgggaaatgctagaatgatttacattgtgaaacggaggaagt 109
||| || |||||||| ||||||| | |||||||||||||||||||||||
Sbjct: 65 catttataaatgtgaatgtgggaaatactagaataacttacattgtgaaacggaggaagt 6
Query: 110 a 110
|
Sbjct: 5 a 5
Score = 67.9 bits (34), Expect = 3e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 65 atatgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
||||||||||||||| ||||| || |||||||||||||||||||||
Sbjct: 91 atatgggaaatgctaaaatgacttgcattgtgaaacggaggaagta 136
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattca 39
||||||||||||||| ||||||| ||||| || |||||
Sbjct: 16 tttcacaatgtaagttattctagtatttcccacattca 53
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 79.8 bits (40), Expect = 7e-15
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 13 aagtcattctagcatttcacatattcatattgatgttaatgaacctaggcatatat 68
|||||||||||||||||| || ||||||||||||||||||||| |||| |||||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatatat 56
Score = 69.9 bits (35), Expect = 7e-12
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 13 aagtcattctagcatttcacatattcatattgatgttaatgaa 55
|||||||||||||||||| || |||||||||||||||||||||
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaa 68
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 79.8 bits (40), Expect = 7e-15
Identities = 96/115 (83%), Gaps = 6/115 (5%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||| |||||||| ||||||| ||||| || ||||||||||||||||||||| ||||
Sbjct: 119 tttcataatgtaagccattctatcatttttcacattcatattgatgttaatgaatctaga 60
Query: 62 catatatg------ggaaatgctagaatgatttacattgtgaaacggaggaagta 110
| ||||| |||||||||||||||| ||| ||||||||||||||| ||||
Sbjct: 59 tagatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagta 5
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatat 42
||||||||| ||||||||||||||||||| || ||||||||
Sbjct: 16 tttcacaatataagtcattctagcatttcccacattcatat 56
Score = 48.1 bits (24), Expect = 2e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagtag 111
||||| ||||||| ||||||| |||||||||||||||||
Sbjct: 92 aaatgatagaatggcttacattatgaaacggaggaagtag 131
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 77.8 bits (39), Expect = 3e-14
Identities = 42/43 (97%)
Strand = Plus / Minus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 47 tgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 77.8 bits (39), Expect = 3e-14
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaat 52
||||||||||||||||||||||||||||| || ||||||||| ||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatattaatgttaat 66
Score = 75.8 bits (38), Expect = 1e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaa 55
||||||||| |||||||||||||||||| || |||||||||||||||||||||
Sbjct: 129 tttcacaatataagtcattctagcattttccacattcatattgatgttaatgaa 76
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||| ||| ||||||||||||||| ||||
Sbjct: 102 aaatgctagaatgacttatattgtgaaacggagggagta 140
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 77.8 bits (39), Expect = 3e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
||||||||| ||||||||||||||||||| || |||||||||||| |||||||| ||||
Sbjct: 147 tttcacaatataagtcattctagcatttcccacattcatattgatattaatgaatctag 89
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||||||| ||| ||||||||||||||| ||||
Sbjct: 116 tgggaaatgctagaatgacttatattgtgaaacggagggagta 158
Score = 54.0 bits (27), Expect = 4e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
||||||||| |||||||||||| | ||| || ||||||||| ||||||||||| ||||
Sbjct: 16 tttcacaatataagtcattctaactttttccacattcatattaatgttaatgaatctag 74
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 78 tagaatgatttacattgtgaaacggaggaagtag 111
|||||||| ||| |||||||||||||||||||||
Sbjct: 37 tagaatgacttatattgtgaaacggaggaagtag 4
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa Indica
Group
Length = 156
Score = 77.8 bits (39), Expect = 3e-14
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgt 48
|||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 141 tttcacaatgtaagtcattctagcattttccatattcatattgatgt 95
Score = 75.8 bits (38), Expect = 1e-13
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 65 atatgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct: 107 atatggaaaatgctagaatgacttacattgtgaaacggaggaagta 152
Score = 73.8 bits (37), Expect = 4e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatga 54
|||||||||||||||||||||||||||| || |||||||| |||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcattttccacattcatatcgatgttaatga 68
Score = 63.9 bits (32), Expect = 4e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagtag 111
|||||||||||||| ||||||||||||||||||| |||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggagggagtag 4
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa
Japonica Group
Length = 147
Score = 77.8 bits (39), Expect = 3e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
||||||||||||||||||| ||||||||| || ||||||||||||| ||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattttagcatttcccacattcatattgatgctaatgaatctag 74
Score = 69.9 bits (35), Expect = 7e-12
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 47 tgggaaatgctaaaatgacttacattgtgaaacggaggaagta 5
Score = 58.0 bits (29), Expect = 3e-08
Identities = 48/53 (90%), Gaps = 1/53 (1%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcat-tctagcatttcacatattcatattgatgttaatg 53
|||||||||||||||||| | ||||||||| || ||||||||||||| |||||
Sbjct: 132 tttcacaatgtaagtcatgtttagcatttcccacattcatattgatgctaatg 80
Score = 50.1 bits (25), Expect = 6e-06
Identities = 41/45 (91%), Gaps = 1/45 (2%)
Strand = Plus / Plus
Query: 68 tgggaaatgctaga-atgatttacattgtgaaacggaggaagtag 111
|||||||||||| | |||| ||||||||||||||||||| |||||
Sbjct: 100 tgggaaatgctaaacatgacttacattgtgaaacggagggagtag 144
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 77.8 bits (39), Expect = 3e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
|||||||||||||| |||||||| ||||| || |||||||||||| |||||||| ||||
Sbjct: 147 tttcacaatgtaagacattctagtatttcccacattcatattgatattaatgaatctaga 88
Query: 62 catatat 68
|||||||
Sbjct: 87 catatat 81
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagtag 111
|||| ||||||||| ||||||||||||||||||| |||||
Sbjct: 43 aaatactagaatgacttacattgtgaaacggagggagtag 4
Score = 54.0 bits (27), Expect = 4e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||| |||||||| ||||||||||||||||||| ||||
Sbjct: 116 tgggaaatactagaatgtcttacattgtgaaacggagggagta 158
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcattt 29
||||||||||||||||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctagtattt 43
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 77.8 bits (39), Expect = 3e-14
Identities = 42/43 (97%)
Strand = Plus / Minus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 47 tgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 77.8 bits (39), Expect = 3e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||||||||||||||||| ||||||||| || || |||||||||| ||||||| ||||
Sbjct: 147 tttcacaatgtaagtcattttagcatttctcacatccatattgatgctaatgaatctaga 88
Query: 62 catatat 68
|||||||
Sbjct: 87 catatat 81
Score = 69.9 bits (35), Expect = 7e-12
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
||||||||||||||||||||||||||||| || ||||||| | || |||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatacttatattaatgaatctag 74
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 71 gaaatgctagaatgatttacattgtgaaacggaggaagtag 111
||||||||| ||||| ||||||||||||||||||| |||||
Sbjct: 119 gaaatgctaaaatgacttacattgtgaaacggagggagtag 159
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 77.8 bits (39), Expect = 3e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
||||| ||||||||||||||||||||| | ||||||||||| |||||||||||| ||||
Sbjct: 147 tttcataatgtaagtcattctagcattacccatattcatatagatgttaatgaatctag 89
Score = 63.9 bits (32), Expect = 4e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagtag 111
|||| ||||||||||||| ||||||| |||||||||||||||||
Sbjct: 47 tgggcaatgctagaatgacttacattatgaaacggaggaagtag 4
Score = 60.0 bits (30), Expect = 6e-09
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaa 55
||||| ||||||||||||||||||||| | || || ||||| ||||||||||||
Sbjct: 16 tttcataatgtaagtcattctagcattgcccacatacatatagatgttaatgaa 69
Score = 60.0 bits (30), Expect = 6e-09
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 65 atatgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
||||||| ||||||||||||| ||||||| ||||||||||| ||||
Sbjct: 113 atatgggtaatgctagaatgacttacattatgaaacggagggagta 158
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 77.8 bits (39), Expect = 3e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||||||| |||||||||||||||||| ||||||||||||||| ||||||| ||||
Sbjct: 147 tttcacaatataagtcattctagcattttctatattcatattgatgctaatgaatctaga 88
Query: 62 catatat 68
|||||||
Sbjct: 87 catatat 81
Score = 73.8 bits (37), Expect = 4e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatga 54
|||||||||||||||||||||||||||| || |||| |||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcattttccacattcgtattgatgttaatga 68
Score = 69.9 bits (35), Expect = 7e-12
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||| ||||||||||||||||||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagtag 111
|||||||||||||| ||| ||||||||||||||| |||||
Sbjct: 120 aaatgctagaatgacttatattgtgaaacggagggagtag 159
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 77.8 bits (39), Expect = 3e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
|||||||||||||||||||||| |||| || ||||||||||||||||||||| ||||
Sbjct: 146 tttcacaatgtaagtcattctaatattttccacattcatattgatgttaatgaatctaga 87
Query: 62 catatat 68
|||||||
Sbjct: 86 catatat 80
Score = 50.1 bits (25), Expect = 6e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 78 tagaatgatttacattgtgaaacggaggaagta 110
|||||||| ||||||||||||||||||| ||||
Sbjct: 125 tagaatgacttacattgtgaaacggagggagta 157
Score = 46.1 bits (23), Expect = 1e-04
Identities = 48/55 (87%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 6 acaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
||||||||||| ||||||| |||| || |||||||||||| |||||||| ||||
Sbjct: 20 acaatgtaagttattctagt-tttcccacattcatattgatattaatgaatctag 73
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 77.8 bits (39), Expect = 3e-14
Identities = 94/109 (86%), Gaps = 5/109 (4%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||||||| ||||||||||||||||||| |||||||||||||||| ||| | || |
Sbjct: 16 tttcacaatataagtcattctagcatttcccatattcatattgatg--aatcta-atatg 72
Query: 62 catatatgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|| |||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 73 --aatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 119
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 65 atatgggaaatgctagaatgatttacattgtgaaacgga 103
||||||||||||||||||||| ||| |||||||||||||
Sbjct: 50 atatgggaaatgctagaatgacttatattgtgaaacgga 12
Score = 60.0 bits (30), Expect = 6e-09
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatatt 43
||||||||| ||||||||||||||||||| || |||||||||
Sbjct: 108 tttcacaatataagtcattctagcatttcccacattcatatt 67
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 77.8 bits (39), Expect = 3e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
||||||||||||||||||| ||||||||| || ||||||||||||| ||||||| ||||
Sbjct: 132 tttcacaatgtaagtcattttagcatttcccacattcatattgatgctaatgaatctag 74
Score = 69.9 bits (35), Expect = 7e-12
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 101 tgggaaatgctaaaatgacttacattgtgaaacggaggaagta 143
Score = 58.0 bits (29), Expect = 3e-08
Identities = 48/53 (90%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcat-tctagcatttcacatattcatattgatgttaatg 53
|||||||||||||||||| | ||||||||| || ||||||||||||| |||||
Sbjct: 16 tttcacaatgtaagtcatgtttagcatttcccacattcatattgatgctaatg 68
Score = 50.1 bits (25), Expect = 6e-06
Identities = 41/45 (91%), Gaps = 1/45 (2%)
Strand = Plus / Minus
Query: 68 tgggaaatgctaga-atgatttacattgtgaaacggaggaagtag 111
|||||||||||| | |||| ||||||||||||||||||| |||||
Sbjct: 48 tgggaaatgctaaacatgacttacattgtgaaacggagggagtag 4
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 77.8 bits (39), Expect = 3e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
|||| |||||||||||||||||||||||| || ||||||||||||| ||||||| ||||
Sbjct: 16 tttcgcaatgtaagtcattctagcatttctcacattcatattgatggtaatgaatctag 74
Score = 77.8 bits (39), Expect = 3e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
|||||||||||||||||||||| |||||| |||||| ||||| ||||||||||| ||||
Sbjct: 146 tttcacaatgtaagtcattctaacatttcccatatttatattaatgttaatgaatctag 88
Score = 69.9 bits (35), Expect = 7e-12
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 65 atatgggaaatgctagaatgatttacattgtgaaacggaggaagtag 111
|||||||||||| |||||||| ||||||||||||||||||| |||||
Sbjct: 112 atatgggaaatgttagaatgacttacattgtgaaacggagggagtag 158
Score = 63.9 bits (32), Expect = 4e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 71 gaaatgctagaatgatttacattgtgaaacggaggaagta 110
||||||||||||||| |||||||| |||||||||||||||
Sbjct: 44 gaaatgctagaatgacttacattgcgaaacggaggaagta 5
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 77.8 bits (39), Expect = 3e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
|||||||||||||||||||||| |||||| || |||||||||||||| |||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctatcatttcccacattcatattgatgtcaatgaatctag 74
Score = 77.8 bits (39), Expect = 3e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
||||| ||||||||||||||||||||||| || |||||||||||||| |||||| ||||
Sbjct: 141 tttcataatgtaagtcattctagcatttcccacattcatattgatgtcaatgaatctag 83
Score = 69.9 bits (35), Expect = 7e-12
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 47 tgggaaatgatagaatgacttacattgtgaaacggaggaagta 5
Score = 63.9 bits (32), Expect = 4e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagtag 111
|||||||||||||||||| ||||||| ||||||||||| |||||
Sbjct: 110 tgggaaatgctagaatgacttacattatgaaacggagggagtag 153
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 77.8 bits (39), Expect = 3e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
||||||||| |||||||||||| |||||| || ||||||||||||||||||||| ||||
Sbjct: 124 tttcacaatataagtcattctaacatttcccacattcatattgatgttaatgaatctag 66
Score = 65.9 bits (33), Expect = 1e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgtta 50
||||||||| |||||||||||||||||| || ||||||||||||||||
Sbjct: 16 tttcacaatataagtcattctagcattttccacattcatattgatgtta 64
Score = 54.0 bits (27), Expect = 4e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
||||||||| |||||||| ||| ||||||||||||||| ||||
Sbjct: 93 tgggaaatgttagaatgacttatattgtgaaacggagggagta 135
>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
Length = 115
Score = 77.8 bits (39), Expect = 3e-14
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgt 48
||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttctcacattcatattgatgt 62
Score = 73.8 bits (37), Expect = 4e-13
Identities = 40/41 (97%)
Strand = Plus / Minus
Query: 71 gaaatgctagaatgatttacattgtgaaacggaggaagtag 111
||||||||||||||| |||||||||||||||||||||||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacggaggaagtag 4
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcat 27
||||||||||||||||| ||||||||
Sbjct: 100 tttcacaatgtaagtcaatctagcat 75
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 77.8 bits (39), Expect = 3e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
|||||||||||||||||||||| ||||| || ||||||||||||| ||||||| ||||
Sbjct: 147 tttcacaatgtaagtcattctaacatttaccacattcatattgatgctaatgaatctaga 88
Query: 62 catatat 68
|||||||
Sbjct: 87 catatat 81
Score = 69.9 bits (35), Expect = 7e-12
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
||||||||| ||||||||||||||||||| || |||||||||||| ||||||| ||||
Sbjct: 16 tttcacaatataagtcattctagcatttctcacattcatattgatactaatgaatctag 74
Score = 63.9 bits (32), Expect = 4e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 71 gaaatgctagaatgatttacattgtgaaacggaggaagta 110
||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 44 gaaatgctagaatgacttatattgtgaaacggaggaagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagtag 111
||||| |||||||| ||||||||||||||||||| |||||
Sbjct: 120 aaatgttagaatgacttacattgtgaaacggagggagtag 159
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 77.8 bits (39), Expect = 3e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
||||||||||||||||||| ||| ||||| || ||||||||||||||||||||| ||||
Sbjct: 136 tttcacaatgtaagtcattttagtatttctcacattcatattgatgttaatgaatctag 78
Score = 54.0 bits (27), Expect = 4e-07
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaat 52
||||||||||||||||||| ||| |||| || ||| ||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattttagtatttgtcacatttatattgatgttaat 66
Score = 48.1 bits (24), Expect = 2e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 71 gaaatgctagaatgatttacattgtgaaacggaggaagta 110
||||| ||| ||||| ||||||||||||||||||| ||||
Sbjct: 108 gaaatactaaaatgacttacattgtgaaacggagggagta 147
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 77.8 bits (39), Expect = 3e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||||||||||||||||||||||||| || ||||||||| ||||||||||| ||||
Sbjct: 147 tttcacaatgtaagtcattctagcattctccacattcatattaatgttaatgaatctaga 88
Query: 62 catatat 68
|||||||
Sbjct: 87 catatat 81
Score = 69.9 bits (35), Expect = 7e-12
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 47 tgggaaatgctaaaatgacttacattgtgaaacggaggaagta 5
Score = 69.9 bits (35), Expect = 7e-12
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
||||||||||||||||||| ||||||||| || ||||||||| |||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattttagcatttcccacattcatattagtgttaatgaatctag 74
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 73 aatgctagaatgatttacattgtgaaacggaggaagtag 111
||||||||||||| ||||||||||||||||||| |||||
Sbjct: 121 aatgctagaatgacttacattgtgaaacggagggagtag 159
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 77.8 bits (39), Expect = 3e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
|||||||||||||||| ||||||||||| |||||||||||| ||||||||||| ||||
Sbjct: 123 tttcacaatgtaagtccttctagcattttccatattcatattaatgttaatgaatctag 65
Score = 67.9 bits (34), Expect = 3e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 65 atatgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||| ||||||||||| || ||||||||||||||||||||||||
Sbjct: 89 atatggaaaatgctagaaggacttacattgtgaaacggaggaagta 134
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 75.8 bits (38), Expect = 1e-13
Identities = 92/109 (84%), Gaps = 2/109 (1%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||| |||||||||| |||||||||| | || |||||||| |||||||||||| ||||
Sbjct: 16 tttcataatgtaagtctttctagcattgcccacattcatatagatgttaatgaatctaga 75
Query: 62 catatatgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||| | |||||||||| | ||||||| ||||||||||| ||||
Sbjct: 76 catata--agcaatgctagaaagtcttacattatgaaacggagggagta 122
Score = 54.0 bits (27), Expect = 4e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||| |||||||||| || ||||||| ||||||||||||||||
Sbjct: 47 tgggcaatgctagaaagacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 75.8 bits (38), Expect = 1e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaa 55
||||||||| ||||||||||||||||||| || ||||||||||||| |||||||
Sbjct: 124 tttcacaatataagtcattctagcatttctcacattcatattgatgctaatgaa 71
Score = 73.8 bits (37), Expect = 4e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatga 54
|||||| |||||||||||||||||||||| || ||||||||||||| ||||||
Sbjct: 16 tttcacgatgtaagtcattctagcatttctcacattcatattgatgctaatga 68
Score = 63.9 bits (32), Expect = 4e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 71 gaaatgctagaatgatttacattgtgaaacggaggaagta 110
||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 96 gaaatgctagaatgacttatattgtgaaacggaggaagta 135
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa Japonica
Group
Length = 155
Score = 75.8 bits (38), Expect = 1e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaa 55
||||||||||||||||||||||| ||||| || ||| |||||||||||||||||
Sbjct: 140 tttcacaatgtaagtcattctagtatttcccacatttatattgatgttaatgaa 87
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagtag 111
|||||||| ||||||||| |||||||||||||||||||||||||
Sbjct: 109 tgggaaatactagaatgacttacattgtgaaacggaggaagtag 152
Score = 67.9 bits (34), Expect = 3e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaa 55
||||||||| |||||||||||| ||||| || |||||||||||||||||||||
Sbjct: 16 tttcacaatataagtcattctattatttcccacattcatattgatgttaatgaa 69
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||| |||||||| ||| ||||||||||||||| ||||
Sbjct: 47 tgggaaataatagaatgacttatattgtgaaacggagggagta 5
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 75.8 bits (38), Expect = 1e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaa 55
||||||||||||||||||||||||||||| || |||||||| |||||| |||||
Sbjct: 147 tttcacaatgtaagtcattctagcatttcccacattcatatagatgttgatgaa 94
Score = 69.9 bits (35), Expect = 7e-12
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 116 tgggaaatgctagaatgacttacattgtgaaacggagggagta 158
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
||||||| ||||||||||| || |||||| || |||||||| |||||||||||| ||||
Sbjct: 16 tttcacattgtaagtcattttatcatttctcacattcatatagatgttaatgaatctag 74
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 73.8 bits (37), Expect = 4e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 12 taagtcattctagcatttcacatattcatattgatgttaatgaacctaggcatatat 68
||||||||||||||||||| || ||||||||||||| ||||||| |||| |||||||
Sbjct: 104 taagtcattctagcatttctcacattcatattgatgctaatgaatctagacatatat 48
Score = 71.9 bits (36), Expect = 2e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 8 aatgtaagtcattctagcatttcacatattcatattgatgttaatgaa 55
||||||||||||||||||||||| || ||||||||||||| |||||||
Sbjct: 1 aatgtaagtcattctagcatttctcacattcatattgatgctaatgaa 48
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 73.8 bits (37), Expect = 4e-13
Identities = 97/118 (82%), Gaps = 8/118 (6%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||| ||||||| ||||||||||||| | || || ||||| |||||||||||| ||||
Sbjct: 121 tttcataatgtaaatcattctagcattgcccacatgcatatagatgttaatgaatctaga 62
Query: 62 cat--------atatgggaaatgctagaatgatttacattgtgaaacggaggaagtag 111
| | ||||||| ||||||||||||| ||||||| |||||||||||||||||
Sbjct: 61 cgtctatatgcatatgggtaatgctagaatgacttacattatgaaacggaggaagtag 4
Score = 54.0 bits (27), Expect = 4e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||| ||||||||||||||||||||| |||||| |||| ||||
Sbjct: 90 tgggcaatgctagaatgatttacattatgaaacagagggagta 132
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatat 42
||||| ||||||||||||||||||||| | ||||| |||||
Sbjct: 16 tttcataatgtaagtcattctagcattacccatatgcatat 56
>RF00906;MIR1122;AAAA02015957.1/30234-30331 39946:Oryza sativa
Indica Group
Length = 98
Score = 73.8 bits (37), Expect = 4e-13
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 62 catatatgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
||||| |||||||||||||||||| |||||||||| |||||||||||||
Sbjct: 53 catatgtgggaaatgctagaatgacttacattgtggaacggaggaagta 5
Score = 54.0 bits (27), Expect = 4e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 76 gctagaatgatttacattgtgaaacggaggaagta 110
|||||||||| ||||||||||||||||||| ||||
Sbjct: 60 gctagaatgacttacattgtgaaacggagggagta 94
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 5 cacaatgtaagtcattctagcatttc 30
||||||||||||||||||||||||||
Sbjct: 19 cacaatgtaagtcattctagcatttc 44
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagc 25
||||||||||||||||||||||||
Sbjct: 83 tttcacaatgtaagtcattctagc 60
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 73.8 bits (37), Expect = 4e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatga 54
||||||||| |||||||||||||||||||||| ||||| |||||| |||||||
Sbjct: 16 tttcacaatataagtcattctagcatttcacacattcacattgatattaatga 68
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagtag 111
|||||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 93 tgggaaatgctagaatgacttatattgtgaaacggaggaagtag 136
Score = 67.9 bits (34), Expect = 3e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaa 55
||||||||| ||||||||||||||||||| || ||||| |||||| ||||||||
Sbjct: 124 tttcacaatataagtcattctagcatttcccacattcacattgatattaatgaa 71
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 71 gaaatgctagaatgatttacattgtgaaacggaggaagtag 111
||||||||||||||| ||| ||||||||||||||| |||||
Sbjct: 44 gaaatgctagaatgacttatattgtgaaacggagggagtag 4
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa Japonica
Group
Length = 156
Score = 73.8 bits (37), Expect = 4e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatga 54
|||||||||||||||||||||||| ||| || ||||||||||||||||||||
Sbjct: 141 tttcacaatgtaagtcattctagccttttccacattcatattgatgttaatga 89
Score = 69.9 bits (35), Expect = 7e-12
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||| ||||||||||||||||||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 69.9 bits (35), Expect = 7e-12
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgt 48
|||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcattttccacattcatattgatgt 62
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 76 gctagaatgatttacattgtgaaacggaggaagtag 111
|||||||||| ||||||||||||||||||| |||||
Sbjct: 118 gctagaatgacttacattgtgaaacggagggagtag 153
>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
Japonica Group
Length = 132
Score = 73.8 bits (37), Expect = 4e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatga 54
||||||||||||||||||| |||||||| || ||||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattttagcattttccacattcatattgatgttaatga 68
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||| ||||| ||||||||||||||||||| ||||
Sbjct: 43 aaatgctaaaatgacttacattgtgaaacggagggagta 5
Score = 50.1 bits (25), Expect = 6e-06
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgtta 50
||||||||||||| | ||| |||||||| || ||||||||||||||||
Sbjct: 117 tttcacaatgtaatttattttagcattttccacattcatattgatgtta 69
>RF00906;MIR1122;AACV01001224.1/5364-5468 39947:Oryza sativa
Japonica Group
Length = 105
Score = 73.8 bits (37), Expect = 4e-13
Identities = 40/41 (97%)
Strand = Plus / Minus
Query: 71 gaaatgctagaatgatttacattgtgaaacggaggaagtag 111
||||||||||||||| |||||||||||||||||||||||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacggaggaagtag 4
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatg 53
||||||||||||||||||||||||||||| || ||| ||||| |||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttctcacatttatattaatgttaatg 67
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 5 cacaatgtaagtcattctagcatt 28
||||||||||||||||||||||||
Sbjct: 87 cacaatgtaagtcattctagcatt 64
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 73 aatgctagaatgatttacattgtgaaacgga 103
||||||||||||| |||||||||| ||||||
Sbjct: 64 aatgctagaatgacttacattgtggaacgga 94
>RF00906;MIR1122;CR855182.1/16479-16369 4530:Oryza sativa (rice)
Length = 111
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagtag 111
|||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 47 tgggaaatgctagaatgacttacattgtgaaacggagggagtag 4
Score = 69.9 bits (35), Expect = 7e-12
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 65 tgggaaatgctagaatgatttacattgtaaaacggagggagta 107
Score = 67.9 bits (34), Expect = 3e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatg 47
||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacgttcatattgatg 61
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa Japonica
Group
Length = 150
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 5 cacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
|||||| |||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 132 cacaatataagtcattctagcatttactatattcatattgatgttaatgaatctag 77
Score = 69.9 bits (35), Expect = 7e-12
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
||||| ||||||||||||| || |||||| || ||||||||||||||||||||| ||||
Sbjct: 16 tttcataatgtaagtcattttaccatttcccacattcatattgatgttaatgaatctag 74
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||| ||| |||||| |||||||||||||
Sbjct: 108 aaatgctagaatgacttatattgtggaacggaggaagta 146
Score = 48.1 bits (24), Expect = 2e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagtag 111
||||||||| || ||||| ||||||| ||||||||||| |||||
Sbjct: 47 tgggaaatggtaaaatgacttacattatgaaacggagggagtag 4
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagtag 111
|||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 47 tgggaaatgctaaaatgacttacattgtgaaacggaggaagtag 4
Score = 69.9 bits (35), Expect = 7e-12
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||||||||||||||||| ||||||||| || |||||| | |||||||||||| | ||
Sbjct: 16 tttcacaatgtaagtcattttagcatttcccacattcatgtagatgttaatgaatcaaga 75
Query: 62 catatat 68
|||||||
Sbjct: 76 catatat 82
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||| |||| |||||||| |||||||| || |||||||| |||||||||||| ||| |
Sbjct: 145 tttcataatgcaagtcattttagcatttttcacattcatatagatgttaatgaatctatg 86
Query: 62 catatat 68
|||||||
Sbjct: 85 catatat 79
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 71.9 bits (36), Expect = 2e-12
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 5 cacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctaggcat 64
|||||| |||||||||||| |||||| |||||||||||||||| ||||||| ||| |||
Sbjct: 144 cacaatataagtcattctaacatttctcatattcatattgatgctaatgaatctaaacat 85
Query: 65 atat 68
||||
Sbjct: 84 atat 81
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 12 taagtcattctagcatttcacatattcatattgatgttaatgaa 55
||||||||||||| |||| |||||||||||||||| |||||||
Sbjct: 26 taagtcattctagtattttccatattcatattgatgctaatgaa 69
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 65 atatgggaaatgctagaatgatttacattgtgaaacggaggaagtag 111
|||||| |||| ||||||||| ||| | |||| ||||||||||||||
Sbjct: 50 atatggaaaatactagaatgacttatactgtggaacggaggaagtag 4
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 71.9 bits (36), Expect = 2e-12
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
|||||||||||||| | |||||| ||| | ||||||||||| |||||||||||| ||||
Sbjct: 147 tttcacaatgtaagactttctagtattgcccatattcatatagatgttaatgaatctaga 88
Query: 62 catatatg 69
||||||||
Sbjct: 87 catatatg 80
Score = 44.1 bits (22), Expect = 4e-04
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaa 55
|||||| ||||||| | |||||| | | | ||||||||||| ||||||||||||
Sbjct: 16 tttcaccatgtaagactttctagtactgcccatattcatatagatgttaatgaa 69
Score = 44.1 bits (22), Expect = 4e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 65 atatgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
||||||| ||| |||||| | ||||||||||||||||||| ||||
Sbjct: 113 atatgggcaatactagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP008214.1/21547670-21547576 39947:Oryza sativa
Japonica Group
Length = 95
Score = 71.9 bits (36), Expect = 2e-12
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 71 gaaatgctagaatgatttacattgtgaaacggaggaagta 110
||||||||||||||| ||||||||||||||||||||||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 60.0 bits (30), Expect = 6e-09
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttca 31
||||||||||||||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttca 45
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 5 cacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
|||||| |||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 19 cacaatataagtcattctagcatttactatattcatattgatgttaatgaatctag 74
Score = 69.9 bits (35), Expect = 7e-12
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
||||| ||||||||||||| || |||||| || ||||||||||||||||||||| ||||
Sbjct: 135 tttcataatgtaagtcattttaccatttcccacattcatattgatgttaatgaatctag 77
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||| ||| |||||| |||||||||||||
Sbjct: 43 aaatgctagaatgacttatattgtggaacggaggaagta 5
Score = 48.1 bits (24), Expect = 2e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagtag 111
||||||||| || ||||| ||||||| ||||||||||| |||||
Sbjct: 104 tgggaaatggtaaaatgacttacattatgaaacggagggagtag 147
>RF00906;MIR1122;AP006159.3/37361-37232 39947:Oryza sativa Japonica
Group
Length = 130
Score = 71.9 bits (36), Expect = 2e-12
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 71 gaaatgctagaatgatttacattgtgaaacggaggaagta 110
||||||||||||||| ||||||||||||||||||||||||
Sbjct: 87 gaaatgctagaatgacttacattgtgaaacggaggaagta 126
Score = 58.0 bits (29), Expect = 3e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgtta 50
||||||||| ||||| ||||||||||||| || ||||| ||||||||||
Sbjct: 16 tttcacaatataagttattctagcatttcccacattcacattgatgtta 64
Score = 58.0 bits (29), Expect = 3e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttc 30
|||||||||||||||||||||||||||||
Sbjct: 115 tttcacaatgtaagtcattctagcatttc 87
Score = 54.0 bits (27), Expect = 4e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||||| | ||| ||||||||||||||| ||||
Sbjct: 47 tgggaaatgctagaataacttatattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 71.9 bits (36), Expect = 2e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||| ||||||||||||||||||||| | |||||||||| |||||||||||| ||||
Sbjct: 16 tttcataatgtaagtcattctagcattgcctatattcatatagatgttaatgaatctaga 75
Query: 62 cata 65
||||
Sbjct: 76 cata 79
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
||||| ||||||||||||||||||| | | || |||||||| |||||||||||| ||||
Sbjct: 147 tttcataatgtaagtcattctagcaatgctcacattcatatggatgttaatgaatctag 89
Score = 58.0 bits (29), Expect = 3e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 75 tgctagaatgatttacattgtgaaacggaggaagtag 111
||||||||||| ||||||| |||||||||||||||||
Sbjct: 123 tgctagaatgacttacattatgaaacggaggaagtag 159
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 73 aatgctagaatgatttacattgtgaaacggaggaagtag 111
||||||||||||| ||||||| ||||||||||| |||||
Sbjct: 42 aatgctagaatgacttacattatgaaacggagggagtag 4
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagtag 111
|||||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 72 tgggaaatgctagaatgacttatattgtgaaacggaggaagtag 115
Score = 63.9 bits (32), Expect = 4e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattga 45
||||||||| ||||||||||||||||||| || |||||||||||
Sbjct: 103 tttcacaatataagtcattctagcatttcccacattcatattga 60
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 70 ggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||||| ||| ||||||||||||||| ||||
Sbjct: 45 ggaaatgctagaatgacttatattgtgaaacggagggagta 5
Score = 58.0 bits (29), Expect = 3e-08
Identities = 42/45 (93%), Gaps = 1/45 (2%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgat 46
||||||||| ||||||||||||||||||| || ||||||||||||
Sbjct: 16 tttcacaatataagtcattctagcatttc-cacattcatattgat 59
>RF00906;MIR1122;AAAA02004489.1/7901-7999 39946:Oryza sativa Indica
Group
Length = 99
Score = 69.9 bits (35), Expect = 7e-12
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 47 tgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 67.9 bits (34), Expect = 3e-11
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 73 aatgctagaatgatttacattgtgaaacggaggaagta 110
||||||||||||||||||||||||||||||||| ||||
Sbjct: 58 aatgctagaatgatttacattgtgaaacggagggagta 95
Score = 58.0 bits (29), Expect = 3e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttc 30
|||||||||||||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttc 44
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatt 28
||||||||||||| |||||||||||||
Sbjct: 84 tttcacaatgtaaatcattctagcatt 58
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 69.9 bits (35), Expect = 7e-12
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
||||||||||||||| |||||||||||| || ||||||||||||| ||||||| ||||
Sbjct: 16 tttcacaatgtaagttattctagcatttttcacattcatattgatgctaatgaatctag 74
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||| ||||||||||||||||||||||||| ||||
Sbjct: 108 aaatgctaaaatgatttacattgtgaaacggagggagta 146
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||| | ||||||||||||||||||| ||||
Sbjct: 43 aaatgctagaataacttacattgtgaaacggagggagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaa 55
||||||||||||| ||||| |||||||| | ||| ||||||||| |||||||
Sbjct: 135 tttcacaatgtaaatcattttagcattttctacatttatattgatgctaatgaa 82
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 69.9 bits (35), Expect = 7e-12
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
|||||||||||||||||||||||||||| || ||||||| | ||||||||||| ||||
Sbjct: 145 tttcacaatgtaagtcattctagcatttttcacattcatactcatgttaatgaatctag 87
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||| ||||||| ||| ||||||||||||||||||||
Sbjct: 47 tgggaaatgccagaatgacttatattgtgaaacggaggaagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||||||| ||||||||||| ||||||| || ||||||| | ||||||||||| |||
Sbjct: 16 tttcacaatataagtcattctggcatttcccacattcatactcatgttaatgaatttaga 75
Query: 62 catatat 68
|||||||
Sbjct: 76 catatat 82
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||| ||||||||||||||||||| ||||
Sbjct: 118 aaatgctagaatgacttacattgtgaaacggagggagta 156
>RF00906;MIR1122;AAAA02022087.1/9518-9625 39946:Oryza sativa Indica
Group
Length = 108
Score = 69.9 bits (35), Expect = 7e-12
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 47 tgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 58.0 bits (29), Expect = 3e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttc 30
|||||||||||||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttc 44
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 73 aatgctagaatgatttacattgtgaaacggaggaagtag 111
||||||||||||| ||| ||||||||||||| |||||||
Sbjct: 67 aatgctagaatgacttatattgtgaaacggaagaagtag 105
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatt 28
||||||||| |||||||||||||||||
Sbjct: 93 tttcacaatataagtcattctagcatt 67
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 69.9 bits (35), Expect = 7e-12
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||| ||||||||||||||||||||||| || |||||||| || |||| |||| ||||
Sbjct: 147 tttcataatgtaagtcattctagcatttcccacattcatatggaggttagtgaatctaga 88
Query: 62 catatat 68
|||||||
Sbjct: 87 catatat 81
Score = 60.0 bits (30), Expect = 6e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 65 atatgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||| |||||||||||||||| ||||||| ||||||||||| ||||
Sbjct: 50 atataggaaatgctagaatgacttacattatgaaacggagggagta 5
Score = 60.0 bits (30), Expect = 6e-09
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaa 55
||||| ||||||||||||||||||||||| |||||||||| || |||| ||||
Sbjct: 16 tttcataatgtaagtcattctagcatttcctatattcatatagaggttagtgaa 69
Score = 60.0 bits (30), Expect = 6e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggagg 105
|||||||||||||||||| ||||||| |||||||||||
Sbjct: 116 tgggaaatgctagaatgacttacattatgaaacggagg 153
>RF00906;MIR1122;AP006757.2/120962-120855 39947:Oryza sativa
Japonica Group
Length = 108
Score = 69.9 bits (35), Expect = 7e-12
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||||||||||||||||||||||| ||||
Sbjct: 66 aaatgctagaatgatttacattgtgaaacggagggagta 104
Score = 54.0 bits (27), Expect = 4e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgt 48
||||||||||||| |||||||||||||| |||||| |||||||||
Sbjct: 93 tttcacaatgtaaatcattctagcatttttcatatttctattgatgt 47
>RF00906;MIR1122;AP008213.1/18080772-18080661 39947:Oryza sativa
Japonica Group
Length = 112
Score = 69.9 bits (35), Expect = 7e-12
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||| ||||||||||||||||||||||||
Sbjct: 70 aaatgctagaatgacttacattgtgaaacggaggaagta 108
Score = 60.0 bits (30), Expect = 6e-09
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 69 gggaaatgctagaatgatttacattgtgaaacggaggaagta 110
||||||||||| ||||| ||||||||||||||||||| ||||
Sbjct: 46 gggaaatgctaaaatgacttacattgtgaaacggagggagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcattt 29
||||||||||||||||||||||||||||
Sbjct: 97 tttcacaatgtaagtcattctagcattt 70
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttc 30
||||||||||||||||||| |||||||||
Sbjct: 16 tttcacaatgtaagtcattttagcatttc 44
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa Indica
Group
Length = 140
Score = 69.9 bits (35), Expect = 7e-12
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 94 tgggaaatgctagaatgacttatattgtgaaacggaggaagta 136
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgat 46
||||||||| ||||||||||||||||||| || ||||||||||||
Sbjct: 125 tttcacaatataagtcattctagcatttcccacattcatattgat 81
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||| ||||||||||||||||||| ||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaat 52
|||||||||||||||||||||||||||| || ||| |||||||| |||||
Sbjct: 16 tttcacaatgtaagtcattctagcattttccacatttatattgatattaat 66
>RF00906;MIR1122;AC137608.2/32926-33041 39947:Oryza sativa Japonica
Group
Length = 116
Score = 69.9 bits (35), Expect = 7e-12
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||| ||||||||||||||||||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 67.9 bits (34), Expect = 3e-11
Identities = 50/54 (92%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaa 55
|||||||||||||||||||||||||||| || || ||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcattt-tcacatccatattgatgttaatgaa 68
Score = 60.0 bits (30), Expect = 6e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 72 aaatgctagaatgatttacattgtgaaacggagg 105
|||||||||||||| |||||||||||||||||||
Sbjct: 74 aaatgctagaatgacttacattgtgaaacggagg 107
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcattt 29
||||||||||||||||||||||||||||
Sbjct: 101 tttcacaatgtaagtcattctagcattt 74
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 69.9 bits (35), Expect = 7e-12
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
||||| ||||||||||||||||||||| | |||||||||| |||||||||||| ||||
Sbjct: 147 tttcataatgtaagtcattctagcattgcctatattcatatagatgttaatgaatctag 89
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
||||| ||||||||||||||||||| | | || |||||||| |||||||||||| ||||
Sbjct: 16 tttcataatgtaagtcattctagcaatgctcacattcatatggatgttaatgaatctag 74
Score = 58.0 bits (29), Expect = 3e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 75 tgctagaatgatttacattgtgaaacggaggaagtag 111
||||||||||| ||||||| |||||||||||||||||
Sbjct: 40 tgctagaatgacttacattatgaaacggaggaagtag 4
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 73 aatgctagaatgatttacattgtgaaacggaggaagtag 111
||||||||||||| ||||||| ||||||||||| |||||
Sbjct: 121 aatgctagaatgacttacattatgaaacggagggagtag 159
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 69.9 bits (35), Expect = 7e-12
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
|||||||||||||||||||||||||||| || |||||||| | |||||||||| ||||
Sbjct: 147 tttcacaatgtaagtcattctagcattttccacattcatataggtgttaatgaatctag 89
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||| ||||||||||||||||||| ||||
Sbjct: 120 aaatgctagaatgacttacattgtgaaacggagggagta 158
Score = 58.0 bits (29), Expect = 3e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 8 aatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
|||||||||||||||| |||||| || |||||||| | |||||||||| ||||
Sbjct: 22 aatgtaagtcattctaacatttcccacattcatataggtgttaatgaatctag 74
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 69.9 bits (35), Expect = 7e-12
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 47 tgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 69.9 bits (35), Expect = 7e-12
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaat 52
||||||||||||||||||||||||||||| || ||| |||||||| |||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacatttatattgatattaat 66
Score = 69.9 bits (35), Expect = 7e-12
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 94 tgggaaatgctagaatgacttatattgtgaaacggaggaagta 136
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgat 46
||||||||| ||||||||||||||||||| || ||||||||||||
Sbjct: 125 tttcacaatataagtcattctagcatttcccacattcatattgat 81
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 69.9 bits (35), Expect = 7e-12
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
||||||||||||||||||||||| |||| |||||| ||||||||| ||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctagtatttttcatatttatattgatgctaatgaatctag 74
Score = 69.9 bits (35), Expect = 7e-12
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||||||||||||||||||||||| ||||
Sbjct: 108 aaatgctagaatgatttacattgtgaaacggagggagta 146
Score = 60.0 bits (30), Expect = 6e-09
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaa 55
||||||||||||| |||||||||||||| | ||||||||||||| |||||||
Sbjct: 135 tttcacaatgtaaatcattctagcattttctacattcatattgatgctaatgaa 82
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagta 110
|||| ||||||||| ||||||||||||||||||| ||||
Sbjct: 43 aaatactagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01023525.1/7783-7916 39947:Oryza sativa
Japonica Group
Length = 134
Score = 69.9 bits (35), Expect = 7e-12
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||| ||||||||||||||||||||||||
Sbjct: 92 aaatgctagaatgacttacattgtgaaacggaggaagta 130
Score = 63.9 bits (32), Expect = 4e-10
Identities = 94/115 (81%), Gaps = 6/115 (5%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
|||||||||||||||||||||||||||| || | ||||||||||||||||| ||||
Sbjct: 119 tttcacaatgtaagtcattctagcatttttcacgtatatattgatgttaatgaatctaga 60
Query: 62 catata------tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
| ||| || ||||| ||||||||| ||||||||| ||||||||| ||||
Sbjct: 59 tagatatgaatgtgagaaatactagaatgacttacattgttaaacggagggagta 5
Score = 50.1 bits (25), Expect = 6e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 6 acaatgtaagtcattctagcatttcacatattcatat 42
||||||||||||||||||| ||||| || ||||||||
Sbjct: 20 acaatgtaagtcattctagtatttctcacattcatat 56
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 69.9 bits (35), Expect = 7e-12
Identities = 87/106 (82%), Gaps = 10/106 (9%)
Strand = Plus / Minus
Query: 5 cacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctaggcat 64
||||||| |||||||| ||||||||| || ||||||||||||| |||||||
Sbjct: 100 cacaatgcaagtcattttagcatttcccacattcatattgatgctaatgaa--------- 50
Query: 65 atatgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
| || ||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 49 -tgtgagaaatgctagaatgagttacattgtgaaacggagggagta 5
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcat 40
||||||||||||| ||||||||||||||| || ||||||
Sbjct: 16 tttcacaatgtaactcattctagcatttctcacattcat 54
>RF00906;MIR1122;AP008217.1/6615240-6615106 39947:Oryza sativa
Japonica Group
Length = 135
Score = 69.9 bits (35), Expect = 7e-12
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||| ||||||||||||||||||||||||
Sbjct: 93 aaatgctagaatgacttacattgtgaaacggaggaagta 131
Score = 67.9 bits (34), Expect = 3e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaa 55
|||||||||||||||||||||||||||| || || |||||||||||||||||
Sbjct: 120 tttcacaatgtaagtcattctagcatttttcacgtttatattgatgttaatgaa 67
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||| ||||| ||||||||||||||||||| ||||
Sbjct: 43 aaatgctaaaatgacttacattgtgaaacggagggagta 5
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcattt 29
||||||||||||||||||| ||||||||
Sbjct: 16 tttcacaatgtaagtcattttagcattt 43
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 69.9 bits (35), Expect = 7e-12
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
||||||||| ||||||||| ||||||||| || ||||||||| ||||||||||| ||||
Sbjct: 16 tttcacaatataagtcattgtagcatttcccacattcatatttatgttaatgaatctag 74
Score = 63.9 bits (32), Expect = 4e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagtag 111
|||||||||||| ||||| ||| |||||||||||||||||||||
Sbjct: 47 tgggaaatgctacaatgacttatattgtgaaacggaggaagtag 4
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||||||| |||| ||||||||||||| || ||| ||||||||| ||||||| ||||
Sbjct: 147 tttcacaatataagccattctagcatttttcacatttatattgatgataatgaatctaga 88
Query: 62 catatat 68
|||||||
Sbjct: 87 catatat 81
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagta 110
||||||||||||| ||| ||||||||||||||| ||||
Sbjct: 120 aaatgctagaatggcttatattgtgaaacggagggagta 158
>RF00906;MIR1122;AACV01009998.1/1442-1290 39947:Oryza sativa
Japonica Group
Length = 153
Score = 69.9 bits (35), Expect = 7e-12
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 47 tgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 69.9 bits (35), Expect = 7e-12
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 107 tgggaaatgctagaatgacttacattgtgaaacggagggagta 149
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacgg 102
|||||||||||||||||| ||||||||||||||||
Sbjct: 64 tgggaaatgctagaatgacttacattgtgaaacgg 98
Score = 58.0 bits (29), Expect = 3e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttc 30
|||||||||||||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttc 44
Score = 58.0 bits (29), Expect = 3e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttc 30
|||||||||||||||||||||||||||||
Sbjct: 95 tttcacaatgtaagtcattctagcatttc 67
Score = 58.0 bits (29), Expect = 3e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttc 30
|||||||||||||||||||||||||||||
Sbjct: 138 tttcacaatgtaagtcattctagcatttc 110
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 69.9 bits (35), Expect = 7e-12
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
|||||||| |||||||||| ||||||||| || ||| ||||||||||||||||| ||||
Sbjct: 147 tttcacaaagtaagtcattttagcatttcccacatttatattgatgttaatgaatctag 89
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
|||||||| |||||||||| | ||||||| || ||| ||||||||||| ||||| ||||
Sbjct: 16 tttcacaaagtaagtcatttttgcatttcccacatttatattgatgtttatgaatctaga 75
Query: 62 catatat 68
|||||||
Sbjct: 76 catatat 82
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||| ||||| |||| |||||||||||||||||||
Sbjct: 116 tgggaaatgctaaaatgacttactttgtgaaacggaggaagta 158
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||| | ||||| |||| |||||||||||||| ||||
Sbjct: 47 tgggaaatgcaaaaatgacttactttgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 67.9 bits (34), Expect = 3e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaa 55
|||||||||||||||||||||||||||| || |||||||| |||| |||||||
Sbjct: 147 tttcacaatgtaagtcattctagcattttccacattcatatagatgctaatgaa 94
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||| ||||||||||||||||||| ||||
Sbjct: 120 aaatgctagaatgacttacattgtgaaacggagggagta 158
Score = 60.0 bits (30), Expect = 6e-09
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaa 55
|||||||||||||||||||||| ||||| |||||||||| |||| |||||||
Sbjct: 16 tttcacaatgtaagtcattctaacattttctatattcatatagatgctaatgaa 69
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagta 110
||||| |||||||| ||||||||||||||||||| ||||
Sbjct: 43 aaatgttagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 67.9 bits (34), Expect = 3e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaa 55
||||| ||||||||||||||||||||||| |||||| |||| ||||||| ||||
Sbjct: 16 tttcataatgtaagtcattctagcatttctcatattgatatagatgttagtgaa 69
Score = 60.0 bits (30), Expect = 6e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 65 atatgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
||||| ||||||||||||||| ||||||| ||||||||||| ||||
Sbjct: 50 atatgagaaatgctagaatgacttacattatgaaacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 56/67 (83%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||| ||||||||||||| |||||||| || ||||| | ||||||| |||| ||||
Sbjct: 147 tttcataatgtaagtcattgtagcatttttcacattcacttggatgttagtgaatctaga 88
Query: 62 catatat 68
|||||||
Sbjct: 87 catatat 81
>RF00906;MIR1122;ABRL01001491.1/12562-12416 65489:Oryza barthii
Length = 147
Score = 67.9 bits (34), Expect = 3e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatg 47
||||||||||||||||||||||| ||||| || |||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagtatttctcacattcatattgatg 61
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 71 gaaatgctagaatgatttacattgtgaaacggaggaagta 110
||||| ||||||||| ||||||||||||||||||| ||||
Sbjct: 44 gaaatactagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP002092.1/128789-128929 39947:Oryza sativa
Japonica Group
Length = 141
Score = 67.9 bits (34), Expect = 3e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaa 55
||||||||| ||||||||||||||||||| ||||| |||||||| ||||||||
Sbjct: 16 tttcacaatataagtcattctagcatttctcatatagatattgatattaatgaa 69
Score = 60.0 bits (30), Expect = 6e-09
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 64 tatatgggaaatgctagaatgatttacattgtgaaacggagg 105
|||||| ||||||||||||||| ||| |||||||||||||||
Sbjct: 51 tatatgagaaatgctagaatgacttatattgtgaaacggagg 10
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||| ||||| ||| ||||||||||||||||||||
Sbjct: 99 aaatgctaaaatgacttatattgtgaaacggaggaagta 137
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||| ||| |||||||||||| ||||| || ||||||||||||||||||||| ||||
Sbjct: 128 tttcataatataagtcattctaacattttccacattcatattgatgttaatgaatctaga 69
Query: 62 catata 67
||||||
Sbjct: 68 catata 63
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagtag 111
|||||||||||||| ||||||| ||||||||||| |||||
Sbjct: 43 aaatgctagaatgacttacattatgaaacggagggagtag 4
Score = 50.1 bits (25), Expect = 6e-06
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgtta 50
||||| |||||||||||||||||||||| || ||| || |||||||||
Sbjct: 16 tttcataatgtaagtcattctagcatttttcacatttatgttgatgtta 64
Score = 48.1 bits (24), Expect = 2e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagtag 111
||||| |||||||| ||| ||| |||||||||||||||||
Sbjct: 101 aaatgttagaatgacttatattatgaaacggaggaagtag 140
>RF00906;MIR1122;AAAA02031701.1/6482-6608 39946:Oryza sativa Indica
Group
Length = 127
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgat 46
||||||||||||||||||||||||| ||| || ||||||||||||
Sbjct: 112 tttcacaatgtaagtcattctagcacttcccacattcatattgat 68
Score = 63.9 bits (32), Expect = 4e-10
Identities = 93/111 (83%), Gaps = 3/111 (2%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaac-ctag 60
||||| ||||||||||||| ||||| || || |||||||||||||||||||| | ||
Sbjct: 16 tttcataatgtaagtcattttagcactttccacattcatattgatgttaatgatcaatat 75
Query: 61 gcatatatgggaaatgctagaatgatttacattgtgaaacggaggaagtag 111
| || |||||| ||||||||||| |||||||||||||| |||| |||||
Sbjct: 76 g--aatgtgggaagtgctagaatgacttacattgtgaaacagagggagtag 124
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 75 tgctagaatgatttacattgtgaaacggaggaagta 110
||||| ||||| ||||||| ||||||||||||||||
Sbjct: 40 tgctaaaatgacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02003147.1/1613-1521 39946:Oryza sativa Indica
Group
Length = 93
Score = 65.9 bits (33), Expect = 1e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 70 ggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||||| |||||||||||||||||| |||||
Sbjct: 49 ggaaatgctagaatgacttacattgtgaaacggagtaagta 89
Score = 60.0 bits (30), Expect = 6e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 77 ctagaatgatttacattgtgaaacggaggaagta 110
||||||||| ||||||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
Score = 58.0 bits (29), Expect = 3e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttc 30
|||||||||||||||||||||||||||||
Sbjct: 78 tttcacaatgtaagtcattctagcatttc 50
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctag 24
|||||||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctag 38
>RF00906;MIR1122;AACV01005382.1/6871-7002 39947:Oryza sativa
Japonica Group
Length = 132
Score = 65.9 bits (33), Expect = 1e-10
Identities = 94/114 (82%), Gaps = 4/114 (3%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||| ||| |||||||||||| |||||| || ||| |||| || ||| |||| ||||
Sbjct: 16 tttcataatataagtcattctaacatttctcacatttatatggaaattagtgaatctaga 75
Query: 62 catata----tgggaaatgctagaatgatttacattgtgaaacggaggaagtag 111
||||| |||||||||||||||||| ||||||| ||||||||||| |||||
Sbjct: 76 tatatagatgtgggaaatgctagaatgacttacattatgaaacggagggagtag 129
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttc 30
||||| |||||||||||||||||||||||
Sbjct: 117 tttcataatgtaagtcattctagcatttc 89
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 65.9 bits (33), Expect = 1e-10
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||| |||||||| | |||||||||| | ||||||||||||||||||||||| |||||
Sbjct: 16 tttcataatgtaagactttctagcattgcctatattcatattgatgttaatgaatctagg 75
Query: 62 catat 66
||||
Sbjct: 76 tatat 80
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 73 aatgctagaatgatttacattgtgaaacggaggaagtag 111
|||||||||| | ||||||| |||||||||||||||||
Sbjct: 119 aatgctagaaagtcttacattatgaaacggaggaagtag 157
>RF00906;MIR1122;AL662994.3/155589-155501 39947:Oryza sativa
Japonica Group
Length = 89
Score = 65.9 bits (33), Expect = 1e-10
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 75 tgctagaatgatttacattgtgaaacggaggaagtag 111
||||||||||| |||||||||||||||||||||||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggaggaagtag 4
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagca 26
|||||||||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagca 40
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 65.9 bits (33), Expect = 1e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 13 aagtcattctagcatttcacatattcatattgatgttaatg 53
|||||||||||||||||| || |||||||||||||||||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatg 41
Score = 65.9 bits (33), Expect = 1e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 13 aagtcattctagcatttcacatattcatattgatgttaatg 53
|||||||||||||||||| || |||||||||||||||||||
Sbjct: 123 aagtcattctagcatttcccacattcatattgatgttaatg 83
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 65.9 bits (33), Expect = 1e-10
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
|||||||||||||| | |||||||||| | ||||||||| | |||||||||||| ||||
Sbjct: 16 tttcacaatgtaagactttctagcattgcccatattcatttagatgttaatgaatctaga 75
Query: 62 catat 66
|||||
Sbjct: 76 catat 80
Score = 60.0 bits (30), Expect = 6e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 65 atatgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
||||||| |||||||||| | ||||||||||||||||||||||||
Sbjct: 50 atatgggcaatgctagaaagtcttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgat 46
||||||||| ||||||||||||||||||| || ||||||||||||
Sbjct: 16 tttcacaatataagtcattctagcatttcccacattcatattgat 60
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 1 ttttcacaatgtaagtcattctagcatttcacatattcatattga 45
|||||||||| ||||||||||||||||||| || |||||||||||
Sbjct: 105 ttttcacaatataagtcattctagcatttcccacattcatattga 61
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||||||| ||| ||||||||||||||| ||||
Sbjct: 47 tgggaaatgctagaatgacttatattgtgaaacggagggagta 5
Score = 58.0 bits (29), Expect = 3e-08
Identities = 42/45 (93%), Gaps = 1/45 (2%)
Strand = Plus / Plus
Query: 68 tgggaaatgctagaatgatttacattgtg-aaacggaggaagtag 111
|||||||||||||||||| ||| |||||| |||||||||||||||
Sbjct: 73 tgggaaatgctagaatgacttatattgtgaaaacggaggaagtag 117
>RF00906;MIR1122;AAAA02032822.1/7151-7018 39946:Oryza sativa Indica
Group
Length = 134
Score = 63.9 bits (32), Expect = 4e-10
Identities = 94/115 (81%), Gaps = 6/115 (5%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||||||||||||||||| |||||||| || | |||||||||||||||||| ||||
Sbjct: 119 tttcacaatgtaagtcattttagcatttttcacgtacatattgatgttaatgaatctaga 60
Query: 62 catata------tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
| ||| |||||||| ||| ||||| ||||||||| ||||||||| ||||
Sbjct: 59 tagatataaatgtgggaaatactaaaatgacttacattgttaaacggagggagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||| ||||| ||||||||||||||||||||||||
Sbjct: 92 aaatgctaaaatgacttacattgtgaaacggaggaagta 130
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 63.9 bits (32), Expect = 4e-10
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
|||||| |||||||||| |||| ||||| || ||||||||||||||||||||| ||||
Sbjct: 119 tttcaccatgtaagtcactctaacattttccacattcatattgatgttaatgaatctaga 60
Query: 62 catatatg 69
|||||||
Sbjct: 59 tatatatg 52
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatat 42
|||||||||| |||||| | ||||||||| |||||||||||
Sbjct: 16 tttcacaatgaaagtcaatttagcatttctcatattcatat 56
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 63.9 bits (32), Expect = 4e-10
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 63 atatatgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||| |||| ||||||||||||| ||||||| ||||||||||||||||
Sbjct: 111 atatgtgggcaatgctagaatgacttacattatgaaacggaggaagta 158
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
||||| ||||||||||||||||||||| | | |||||||| |||||||||||| ||||
Sbjct: 16 tttcataatgtaagtcattctagcattaccaacattcatatagatgttaatgaatctag 74
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 73 aatgctagaatgatttacattgtgaaacggaggaagta 110
||||||||||||| ||||||| ||||||||||| ||||
Sbjct: 42 aatgctagaatgacttacattatgaaacggagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaa 55
||||| ||||||||||||||||||||| | || || |||| ||||||||||||
Sbjct: 147 tttcataatgtaagtcattctagcattgcccacatatatatagatgttaatgaa 94
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 63.9 bits (32), Expect = 4e-10
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
|||||||||||||| | |||||| ||| | || |||||||| |||||||||||| ||||
Sbjct: 147 tttcacaatgtaagactttctagtattgcccacattcatatagatgttaatgaatctaga 88
Query: 62 catatatg 69
||||||||
Sbjct: 87 catatatg 80
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaa 55
|||||||||||||| | |||||| | | | ||||||||||| ||||||||||||
Sbjct: 16 tttcacaatgtaagactttctagtactgcccatattcatatagatgttaatgaa 69
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 63.9 bits (32), Expect = 4e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 71 gaaatgctagaatgatttacattgtgaaacggaggaagta 110
||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 44 gaaatgctaaaatgacttacattgtgaaacggaggaagta 5
Score = 60.0 bits (30), Expect = 6e-09
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaa 55
||||||||||||||||||| ||||||||| || ||| | ||||||| |||||||
Sbjct: 16 tttcacaatgtaagtcattttagcatttctcacatttacattgatgctaatgaa 69
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||| ||||| ||| ||||||||||||||| ||||
Sbjct: 114 aaatgctaaaatgacttatattgtgaaacggagggagta 152
>RF00906;MIR1122;AP003491.3/121978-121836 39947:Oryza sativa
Japonica Group
Length = 143
Score = 63.9 bits (32), Expect = 4e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagtag 111
|||||||||||||| ||||||||||||||||||| |||||
Sbjct: 101 aaatgctagaatgacttacattgtgaaacggagggagtag 140
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaat 52
|||||||||||||||||||||||||||| || | | ||||||||||||||
Sbjct: 128 tttcacaatgtaagtcattctagcattttccacaattatattgatgttaat 78
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcattt 29
||||||||||||||||||| ||||||||
Sbjct: 16 tttcacaatgtaagtcattttagcattt 43
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||| ||||| ||||||||||||| ||||| ||||
Sbjct: 43 aaatgctaaaatgacttacattgtgaaatggagggagta 5
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa
Japonica Group
Length = 160
Score = 63.9 bits (32), Expect = 4e-10
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||| ||| ||||||||||||||||| | || |||||||| |||||||||||| || |
Sbjct: 16 tttcataatataagtcattctagcattgcccacattcatatagatgttaatgaatctgga 75
Query: 62 catatatg 69
||||||||
Sbjct: 76 catatatg 83
Score = 48.1 bits (24), Expect = 2e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaa 107
|||| ||||||||||||| ||| ||| |||||||||||||
Sbjct: 47 tgggcaatgctagaatgacttatattatgaaacggaggaa 8
Score = 48.1 bits (24), Expect = 2e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagtag 111
|||| ||| ||||||||| ||| ||||||||||||||| |||||
Sbjct: 114 tgggcaatcctagaatgacttatattgtgaaacggagggagtag 157
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa
Indica Group
Length = 144
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
||||| ||| |||||| |||||||||| | ||||||||||| |||||||||||| ||||
Sbjct: 16 tttcataatataagtctttctagcattgctcatattcatatagatgttaatgaatctag 74
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
||||| ||| |||| | |||||||||| | ||||||||||| |||| ||||||| ||||
Sbjct: 129 tttcataatataagactttctagcattacccatattcatatagatgctaatgaatctag 71
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
||||| |||||||||| |||||||||| | || |||||||| |||||||||||| ||||
Sbjct: 16 tttcataatgtaagtctttctagcattgcccacattcatatagatgttaatgaatctag 74
Score = 54.0 bits (27), Expect = 4e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||| |||||||||| || ||||||| ||||||||||||||||
Sbjct: 47 tgggcaatgctagaaagacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02018733.1/10980-10861 39946:Oryza sativa
Indica Group
Length = 120
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 65 atatgggaaatgctagaatgatttacattgtgaaacggaggaagtag 111
|||||| |||||||||||||| || |||||||||||||||| |||||
Sbjct: 50 atatggaaaatgctagaatgacttgcattgtgaaacggagggagtag 4
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||| ||||||||||||||||||| ||||
Sbjct: 78 aaatgctagaatgacttacattgtgaaacggagggagta 116
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcattt 29
||||||||||||||||||||||||||||
Sbjct: 105 tttcacaatgtaagtcattctagcattt 78
Score = 50.1 bits (25), Expect = 6e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattc 38
|||||||||| ||||||||||||||||| |||||||
Sbjct: 16 tttcacaatgcaagtcattctagcattttccatattc 52
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa Indica
Group
Length = 142
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgt 48
||||| ||||||||||||| ||||||||| || ||||||||||||||
Sbjct: 127 tttcataatgtaagtcattgtagcatttcccacattcatattgatgt 81
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagtag 111
|||||||||||| ||||| ||||||| ||||||||||| |||||
Sbjct: 96 tgggaaatgctacaatgacttacattatgaaacggagggagtag 139
Score = 54.0 bits (27), Expect = 4e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
||||| ||| |||||||||||||||||| || ||||||| ||||| ||||||| ||||
Sbjct: 16 tttcataatataagtcattctagcattttccacattcatactgatgctaatgaatctag 74
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||| ||| ||| |||||| |||||||||
Sbjct: 43 aaatgctagaatgacttatattatgaaacagaggaagta 5
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 65 atatgggaaatgctagaatgatttacattgtgaaacggaggaagtag 111
||||||| || |||||||||| ||||||| |||||||||||||||||
Sbjct: 50 atatgggtaaggctagaatgacttacattatgaaacggaggaagtag 4
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
||||| |||||||||||||||||| || | ||||| ||||| |||||||||||| ||||
Sbjct: 16 tttcataatgtaagtcattctagccttacccatatgcatatagatgttaatgaatctag 74
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaa 55
||||| ||||||||||||| ||||||| | || |||||||| |||| |||||||
Sbjct: 147 tttcataatgtaagtcattttagcattgcccacattcatatagatggtaatgaa 94
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||| ||||||| ||||| ||||||| ||||||||||| ||||
Sbjct: 116 tgggcaatgctaaaatgacttacattatgaaacggagggagta 158
>RF00906;MIR1122;AAAA02025148.1/1003-861 39946:Oryza sativa Indica
Group
Length = 143
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagta 110
|||| ||||||||| ||||||||||||||||||||||||
Sbjct: 43 aaatactagaatgacttacattgtgaaacggaggaagta 5
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 71 gaaatgctagaatgatttacattgtgaaacggaggaagtag 111
||||| ||||||||| ||| |||||||||||||||||||||
Sbjct: 100 gaaatcctagaatgacttatattgtgaaacggaggaagtag 140
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcattt 29
||||||||||||||||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctagtattt 43
Score = 44.1 bits (22), Expect = 4e-04
Identities = 55/66 (83%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||||||| ||||||||||||| ||||| | || ||||| |||||||||| ||||
Sbjct: 128 tttcacaatataagtcattctaggatttctctcatccatataattgttaatgaatctaga 69
Query: 62 catata 67
||||||
Sbjct: 68 catata 63
>RF00906;MIR1122;AAAA02033815.1/24477-24365 39946:Oryza sativa
Indica Group
Length = 113
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||| ||| ||||| ||||||||||||||||||||||||
Sbjct: 67 tgggaaatactaaaatgacttacattgtgaaacggaggaagta 109
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatatt 43
||||||||||||||||||| ||| ||||| || |||||||||
Sbjct: 98 tttcacaatgtaagtcattttagtatttcccacattcatatt 57
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 81 aatgatttacattgtgaaacggaggaagta 110
||||| ||||||||||||||||||| ||||
Sbjct: 34 aatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||| |||||||||||||||||||||| || |||||||| |||| |||||| ||||
Sbjct: 16 tttcataatgtaagtcattctagcattttccacattcatatcgatgccaatgaatctaga 75
Query: 62 catatat 68
|||||||
Sbjct: 76 catatat 82
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||| ||||||| ||||||||||| ||||
Sbjct: 43 aaatgctagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02027852.1/19341-19475 39946:Oryza sativa
Indica Group
Length = 135
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
|||||||||||||||||||||| ||||| || |||||||||||| ||||||| ||||
Sbjct: 120 tttcacaatgtaagtcattctatcatttttcacgttcatattgatgctaatgaatctag 62
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagta 110
||||| |||||||| ||||||||||||||||||| ||||
Sbjct: 93 aaatgatagaatgacttacattgtgaaacggagggagta 131
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatat 42
||||||||| |||||||||||| |||||| || ||||||||
Sbjct: 16 tttcacaatataagtcattctatcatttctcaaattcatat 56
>RF00906;MIR1122;AP008210.1/22180576-22180487 39947:Oryza sativa
Japonica Group
Length = 90
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 13 aagtcattctagcatttcacatattcatattgatgttaatgaa 55
|||||||||||||||||| || ||||||||||||| |||||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgctaatgaa 43
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 16 tcattctagcatttcacatattcatattgatgttaatgaa 55
||||||||||||||| || ||||||||||||| |||||||
Sbjct: 87 tcattctagcatttcccacattcatattgatgctaatgaa 48
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||| ||||||||| ||| ||||||||||||||||||||
Sbjct: 47 tgggaaatactagaatgacttatattgtgaaacggaggaagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
||||||||| ||||||||||||| ||||| || |||||||||||| ||||||| ||||
Sbjct: 16 tttcacaatataagtcattctagtatttcccacattcatattgatactaatgaatctag 74
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatg 47
||||| |||||||||||||| | |||||| || |||||||||||||
Sbjct: 144 tttcataatgtaagtcattccaccatttcccacattcatattgatg 99
Score = 48.1 bits (24), Expect = 2e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagtag 111
||||||||| | |||||| ||||||| ||||||||||| |||||
Sbjct: 113 tgggaaatggtggaatgacttacattatgaaacggagggagtag 156
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||| ||||||| ||||||||||||||||
Sbjct: 43 aaatgctagaatgacttacattatgaaacggaggaagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaat 52
||||| |||||||||||||||||||||| || ||||||| ||||||||||
Sbjct: 16 tttcataatgtaagtcattctagcatttttcacattcatagtgatgttaat 66
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaat 52
||||| ||||||||||||||||| ||||| || ||||||| ||||||||||
Sbjct: 133 tttcataatgtaagtcattctagtatttcccacattcatagtgatgttaat 83
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa
Japonica Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||| |||||||||||||||||||||| || |||||||| |||| |||||| ||||
Sbjct: 16 tttcataatgtaagtcattctagcattttccacattcatatcgatgccaatgaatctaga 75
Query: 62 catatat 68
|||||||
Sbjct: 76 catatat 82
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||| ||||||| ||||||||||| ||||
Sbjct: 43 aaatgctagaatgacttacattatgaaacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
||||| ||||||||||||||||| |||| || || ||||| |||| ||||||| ||||
Sbjct: 147 tttcataatgtaagtcattctagtatttttcacatccatatcgatgctaatgaatctag 89
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagta 110
|||| ||||||||| ||||||| ||||||||||| ||||
Sbjct: 120 aaatactagaatgacttacattatgaaacggagggagta 158
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 19 ttctagcatttcacatattcatattgatgttaatgaacctaggcatatatg 69
|||||||||| | || |||||||| |||||||||||| |||||||||||||
Sbjct: 106 ttctagcattgcccacattcatatagatgttaatgaatctaggcatatatg 56
Score = 54.0 bits (27), Expect = 4e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 19 ttctagcatttcacatattcatattgatgttaatgaacctaggcata 65
|||||||||| | ||||||||||| ||||||||||| |||||||||
Sbjct: 9 ttctagcattgcccatattcatatatatgttaatgaatctaggcata 55
>RF00906;MIR1122;AAAA02008121.1/20552-20439 39946:Oryza sativa
Indica Group
Length = 114
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaat 52
||||||||||||||||||| ||| |||| || ||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattttagtattttccacattcatattgatgttaat 66
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagta 110
|||| ||| ||||| ||||||||||||||||||||||||
Sbjct: 43 aaatactaaaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||| |||||||||| |||||| ||| | || |||||||| |||||||||||| ||||
Sbjct: 16 tttcataatgtaagtctttctagtattgcccacattcatatagatgttaatgaatctaga 75
Query: 62 catatat 68
|||||||
Sbjct: 76 catatat 82
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
||||| |||||||| | |||||||||| | ||||||||||| |||||||||||| ||||
Sbjct: 147 tttcataatgtaagactttctagcattgctcatattcatatagatgttaatgaatctag 89
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||| ||| |||||| || ||||||| ||||||||||||||||
Sbjct: 47 tgggcaatactagaaagacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AP008213.1/22940331-22940471 39947:Oryza sativa
Japonica Group
Length = 141
Score = 60.0 bits (30), Expect = 6e-09
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaa 55
|||||||||||||| |||| ||||||| | ||||| ||||| ||||||||||||
Sbjct: 126 tttcacaatgtaagacattttagcattgctcatatacatatagatgttaatgaa 73
Score = 54.0 bits (27), Expect = 4e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 64 tatatgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||| | ||||||| |||| ||||||||||||||||||||||||
Sbjct: 91 tatatgagcaatgctaaaatgtcttacattgtgaaacggaggaagta 137
>RF00906;MIR1122;FJ581044.1/8310-8181 4538:Oryza glaberrima
(African rice)
Length = 130
Score = 60.0 bits (30), Expect = 6e-09
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaa 55
||||||||||||||| |||||||||||| || | | |||||||||||||||||
Sbjct: 16 tttcacaatgtaagttattctagcattttccacaattatattgatgttaatgaa 69
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||| | ||||||||||||||||||| ||||
Sbjct: 43 aaatgctagaataacttacattgtgaaacggagggagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 82 atgatttacattgtgaaacggaggaagtag 111
|||| ||||||||||||||||||| |||||
Sbjct: 98 atgacttacattgtgaaacggagggagtag 127
>RF00906;MIR1122;AACV01016615.1/81402-81262 39947:Oryza sativa
Japonica Group
Length = 141
Score = 60.0 bits (30), Expect = 6e-09
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaa 55
|||||||||||||| |||| ||||||| | ||||| ||||| ||||||||||||
Sbjct: 16 tttcacaatgtaagacattttagcattgctcatatacatatagatgttaatgaa 69
Score = 54.0 bits (27), Expect = 4e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 64 tatatgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||| | ||||||| |||| ||||||||||||||||||||||||
Sbjct: 51 tatatgagcaatgctaaaatgtcttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AL606444.3/32464-32336 39947:Oryza sativa Japonica
Group
Length = 129
Score = 60.0 bits (30), Expect = 6e-09
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgat 46
||||||||||||||| |||||||||||| || ||||||||||||
Sbjct: 114 tttcacaatgtaagttattctagcatttnccacattcatattgat 70
Score = 58.0 bits (29), Expect = 3e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgat 46
||||||||||||||| |||||||||||| || ||||||||||||
Sbjct: 16 tttcacaatgtaagttattctagcattttccacattcatattgat 60
Score = 58.0 bits (29), Expect = 3e-08
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagtag 111
||| |||||||||||| | ||||||||||||||||||| |||||
Sbjct: 83 tggnaaatgctagaataacttacattgtgaaacggagggagtag 126
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||| | ||||||||||||||||||| ||||
Sbjct: 43 aaatgctagaataacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa Indica
Group
Length = 140
Score = 60.0 bits (30), Expect = 6e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 73 aatgctagaatgatttacattgtgaaacggaggaagta 110
||||||||||||| ||||||| ||||||||||||||||
Sbjct: 99 aatgctagaatgacttacattatgaaacggaggaagta 136
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 65 atatgggaaatgctagaatgatttacattgtgaaacggaggaagtag 111
||||||| ||| |||||||| ||||||| ||||||||||| |||||
Sbjct: 50 atatgggcaatattagaatgacttacattatgaaacggagggagtag 4
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
||||| |||||||||||||||| ||| | ||||| ||||| ||| |||||||| ||||
Sbjct: 16 tttcataatgtaagtcattctaatattgcccatatgcatatagatattaatgaatctag 74
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatt 28
||||| |||||||||||||||||||||
Sbjct: 125 tttcataatgtaagtcattctagcatt 99
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
Group
Length = 134
Score = 60.0 bits (30), Expect = 6e-09
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaa 55
||||||||| ||||||||| ||| |||| || |||||||||||||||||||||
Sbjct: 119 tttcacaatataagtcattttagtattttccacattcatattgatgttaatgaa 66
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgt 48
||||||||||||||||||| | | |||| || ||||||||||||||
Sbjct: 16 tttcacaatgtaagtcatttttgtattttccacattcatattgatgt 62
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagta 110
|||| ||| ||||| ||| ||||||||||||||||||||
Sbjct: 92 aaatactaaaatgacttatattgtgaaacggaggaagta 130
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 81 aatgatttacattgtgaaacggaggaagta 110
||||| ||||||||||||||||||| ||||
Sbjct: 34 aatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01010533.1/25208-25336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 58.0 bits (29), Expect = 3e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgat 46
||||||||||||||| |||||||||||| || ||||||||||||
Sbjct: 16 tttcacaatgtaagttattctagcattttccacattcatattgat 60
Score = 58.0 bits (29), Expect = 3e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgat 46
||||||||||||||| |||||||||||| || ||||||||||||
Sbjct: 114 tttcacaatgtaagttattctagcattttccacattcatattgat 70
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagtag 111
|||||||||||| | ||||||||||||||||||| |||||
Sbjct: 87 aaatgctagaataacttacattgtgaaacggagggagtag 126
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||| | ||||||||||||||||||| ||||
Sbjct: 43 aaatgctagaataacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 58.0 bits (29), Expect = 3e-08
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
|||||||||||||| | || ||||||| | ||||||||| | |||||||||||| ||||
Sbjct: 147 tttcacaatgtaagactttttagcattgcccatattcatttagatgttaatgaatctaga 88
Query: 62 catat 66
|||||
Sbjct: 87 catat 83
Score = 54.0 bits (27), Expect = 4e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 65 atatgggaaatgctagaatgatttacattgtgaaacggaggaagtag 111
||||||| ||||||| || | |||||||||||||||||||||||||
Sbjct: 113 atatgggcaatgctaaaaagtcttacattgtgaaacggaggaagtag 159
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaa 55
|||||||||||||| | |||||||||| | ||||| ||||| || |||||||||
Sbjct: 16 tttcacaatgtaagactttctagcattgctcatatacatatagacgttaatgaa 69
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 64 tatatgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||| | |||||||||| | ||||||||||||||||||| ||||
Sbjct: 51 tatatgagcaatgctagaaagtcttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01027096.1/420-516 39947:Oryza sativa
Japonica Group
Length = 97
Score = 58.0 bits (29), Expect = 3e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 6 acaatgtaagtcattctagcatttcacatattcatattgatgttaatga 54
||||| ||||||||||||||||||| || ||| |||||||||| |||||
Sbjct: 78 acaatataagtcattctagcatttctcacatttatattgatgtaaatga 30
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 71 gaaatgctagaatgatttacattgtgaaacggaggaagta 110
||||||||||||||| ||| ||||| ||||||||||||||
Sbjct: 54 gaaatgctagaatgacttatattgtaaaacggaggaagta 93
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 58.0 bits (29), Expect = 3e-08
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
|||||||||||||| | |||||||||| | || |||||||| ||||||||| || ||||
Sbjct: 123 tttcacaatgtaagactttctagcattgcccacattcatatagatgttaataaatctaga 64
Query: 62 catat 66
|||||
Sbjct: 63 catat 59
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagtag 111
|||| |||||||||| | |||||||||||||||||||||||||
Sbjct: 92 tgggcaatgctagaaagtcttacattgtgaaacggaggaagtag 135
>RF00906;MIR1122;AP003216.3/11030-11122 39947:Oryza sativa Japonica
Group
Length = 93
Score = 58.0 bits (29), Expect = 3e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 74 atgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||| ||||| ||||||||||||||||||
Sbjct: 41 atgctagaatgacttacactgtgaaacggaggaagta 5
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||| ||| |||||||||||||| |||||
Sbjct: 51 aaatgctagaatgacttatattgtgaaacggagtaagta 89
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcattt 29
||||||||| ||||||||||||||||||
Sbjct: 78 tttcacaatataagtcattctagcattt 51
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcat 27
||||||| ||||||||||||||||||
Sbjct: 16 tttcacagtgtaagtcattctagcat 41
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagtag 111
|||| |||||||||| | |||||||||||||||||||||||||
Sbjct: 47 tgggcaatgctagaaagtcttacattgtgaaacggaggaagtag 4
Score = 50.1 bits (25), Expect = 6e-06
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
|||||||||||||| | |||||||||| | || |||||| | |||| ||||||| ||||
Sbjct: 147 tttcacaatgtaagactttctagcattgcccaaattcatttagatgctaatgaatctaga 88
Query: 62 catat 66
|||||
Sbjct: 87 catat 83
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||| |||||||||| | ||||||||||||||||||| ||||
Sbjct: 116 tgggcaatgctagaaagtcttacattgtgaaacggagggagta 158
Score = 44.1 bits (22), Expect = 4e-04
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaa 55
|||||||||||||| | |||||||||| | || || ||||| |||||||||||
Sbjct: 16 tttcacaatgtaagactttctagcattgcccacatacatataaatgttaatgaa 69
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagtag 111
|||| ||||||||||| | ||||||| |||||||||||||||||
Sbjct: 47 tgggcaatgctagaataacttacattatgaaacggaggaagtag 4
Score = 48.1 bits (24), Expect = 2e-05
Identities = 54/64 (84%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||| ||||||||| ||||||||||| || |||||||| ||||||||| || ||||
Sbjct: 126 tttcataatgtaagttattctagcattgtccacattcatatagatgttaataaatctaga 67
Query: 62 cata 65
||||
Sbjct: 66 cata 63
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 73 aatgctagaatgatttacattgtgaaacggaggaagta 110
||||||||||| | ||||||| ||||||||||| ||||
Sbjct: 100 aatgctagaataacttacattatgaaacggagggagta 137
>RF00906;MIR1122;AAAA02029423.1/117947-118080 39946:Oryza sativa
Indica Group
Length = 134
Score = 56.0 bits (28), Expect = 1e-07
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||||||| ||||||||| |||||||| |||||| | ||| ||||||||||| ||||
Sbjct: 16 tttcacaatataagtcattttagcatttttcatatttacattaatgttaatgaatctaga 75
Query: 62 catatatg 69
|| |||||
Sbjct: 76 cagatatg 83
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||| ||||| ||| ||||||||||||| ||||||
Sbjct: 43 aaatgctaaaatgacttatattgtgaaacggaagaagta 5
>RF00906;MIR1122;AP003246.3/24505-24634 39947:Oryza sativa Japonica
Group
Length = 130
Score = 56.0 bits (28), Expect = 1e-07
Identities = 91/111 (81%), Gaps = 2/111 (1%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
|||||||||||||| | |||||||||| | || |||||||| ||| ||||||| |||
Sbjct: 115 tttcacaatgtaagactttctagcattgcccacattcatatggatactaatgaatttaga 56
Query: 62 catatatggga--aatgctagaatgatttacattgtgaaacggaggaagta 110
|||| ||| || |||||||||| | ||||||| ||||| ||||||||||
Sbjct: 55 cataaatgtgaacaatgctagaaagtcttacattatgaaatggaggaagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||| |||||||||| | ||||||||||||||||| ||||||
Sbjct: 84 tgggcaatgctagaaagtcttacattgtgaaacggatgaagta 126
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||| |||||||| | |||||||||| | || |||||||| |||||||||||| ||||
Sbjct: 147 tttcataatgtaagactttctagcattgcccacattcatatagatgttaatgaatctaga 88
Query: 62 catatatg 69
|||||||
Sbjct: 87 aatatatg 80
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
||||| |||||||| | || ||||||| | || |||||||| |||||||||||| ||||
Sbjct: 16 tttcataatgtaagactttttagcattcctcacattcatatagatgttaatgaatctag 74
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||| |||||||||| | ||||||| ||||||||||||||||
Sbjct: 116 tgggcaatgctagaaagtcttacattatgaaacggaggaagta 158
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||| |||||||| | |||||||||| | || |||||||| |||||||||||| ||||
Sbjct: 16 tttcataatgtaagactttctagcattgcccacattcatatagatgttaatgaatctaga 75
Query: 62 catatatg 69
|||||||
Sbjct: 76 aatatatg 83
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||| |||||||||| | ||||||| ||||||||||||||||
Sbjct: 47 tgggcaatgctagaaagtcttacattatgaaacggaggaagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
||||| |||||||| | || ||||||| | || |||||||| |||||||||||| ||||
Sbjct: 147 tttcataatgtaagactttttagcattgctcacattcatatagatgttaatgaatctag 89
>RF00906;MIR1122;AAAA02033484.1/80878-80987 39946:Oryza sativa
Indica Group
Length = 110
Score = 54.0 bits (27), Expect = 4e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
||||||||||||| ||||| |||||||| |||||| |||||||| ||||||| ||||
Sbjct: 95 tttcacaatgtaaatcattttagcatttttcatatttatattgatactaatgaatctag 37
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||| ||||||||||||||||||| ||||| ||||
Sbjct: 68 aaatgctaaaatgatttacattgtgaaatggagggagta 106
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 81 aatgatttacattgtgaaacggaggaagta 110
||||| ||||||||||||||||||||||||
Sbjct: 34 aatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02029293.1/9001-8890 39946:Oryza sativa Indica
Group
Length = 112
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagta 110
|||| ||||||||| || |||||||||||||||||||||
Sbjct: 70 aaatactagaatgacttgcattgtgaaacggaggaagta 108
Score = 50.1 bits (25), Expect = 6e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 78 tagaatgatttacattgtgaaacggaggaagta 110
|||||||| ||||||||||||||||||| ||||
Sbjct: 37 tagaatgacttacattgtgaaacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaat 52
|||||||||| |||||||||||| |||| || ||| |||||||| |||||
Sbjct: 97 tttcacaatgcaagtcattctagtatttttcacatttatattgatattaat 47
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattcta 23
||||||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattcta 37
>RF00906;MIR1122;AAAA02033622.1/8442-8581 39946:Oryza sativa Indica
Group
Length = 140
Score = 54.0 bits (27), Expect = 4e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||| ||| ||| | ||||||||||||||||||||||||
Sbjct: 98 tgggaaattctacaataacttacattgtgaaacggaggaagta 140
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 87 ttacattgtgaaacggaggaagta 110
||||||||||||||||||||||||
Sbjct: 28 ttacattgtgaaacggaggaagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatatt 43
||||||||||||||| ||| ||| ||||| || |||||||||
Sbjct: 129 tttcacaatgtaagttattgtagaatttcccacattcatatt 88
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa
Japonica Group
Length = 162
Score = 54.0 bits (27), Expect = 4e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
||||| ||| |||| | |||||| ||| | ||||||||||| |||||||||||||||||
Sbjct: 16 tttcataatataagactttctagtattgcccatattcatatagatgttaatgaacctag 74
>RF00906;MIR1122;AACV01024080.1/281-400 39947:Oryza sativa
Japonica Group
Length = 120
Score = 54.0 bits (27), Expect = 4e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgt 48
||||||||||||||||||| ||| |||| || ||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattatagtatttttcacattcatattgatgt 62
Score = 48.1 bits (24), Expect = 2e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagtag 111
|||| ||| ||||| ||||||||||||||||||| |||||
Sbjct: 43 aaatactataatgacttacattgtgaaacggagggagtag 4
Score = 48.1 bits (24), Expect = 2e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattga 45
||||| ||||||||||||||||| |||| || |||||||||||
Sbjct: 105 tttcataatgtaagtcattctagtatttttcacattcatattga 62
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa
Japonica Group
Length = 133
Score = 54.0 bits (27), Expect = 4e-07
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
|||||||||||||| | |||||||||| || |||||| | |||||||||||| ||||
Sbjct: 16 tttcacaatgtaagactttctagcattatccacattcatttagatgttaatgaatctaga 75
Query: 62 catatat 68
|||||||
Sbjct: 76 catatat 82
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 73 aatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||| | ||||||||||||||||||||||||
Sbjct: 42 aatgctagaaagtcttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 54.0 bits (27), Expect = 4e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||| |||||||||| | ||||||||||||||||||||||||
Sbjct: 47 tgggtaatgctagaaagtcttacattgtgaaacggaggaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaa 55
|||||||||||||| | |||||||||| ||||| ||||| ||||||||||||
Sbjct: 147 tttcacaatgtaagactttctagcattgtccatatacatatagatgttaatgaa 94
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
|||||||||||||| | |||||||||| | || |||||| | | |||||||||| ||||
Sbjct: 16 tttcacaatgtaagactttctagcattacccacattcatttagttgttaatgaatctag 74
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 64 tatatgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
||||||| |||||||||| | ||||||||||||||||||| ||||
Sbjct: 112 tatatggacaatgctagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 73 aatgctagaatgatttacattgtgaaacggaggaagtag 111
|||||||||| | |||||||||||||||||||||||||
Sbjct: 42 aatgctagaaagtcttacattgtgaaacggaggaagtag 4
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
|||||||||||||| | |||||||||| | || ||||| | |||||||||||| ||||
Sbjct: 16 tttcacaatgtaagactttctagcattgctcacattcacttagatgttaatgaatctag 74
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
||||| |||||||| | |||||||||| | || || ||||| |||||||||||| ||||
Sbjct: 136 tttcataatgtaagactttctagcattgcccacatacatatagatgttaatgaatctag 78
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 54.0 bits (27), Expect = 4e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
|||||||||||||| | | |||||||| | || |||||||| |||||||||||| ||||
Sbjct: 16 tttcacaatgtaagacttcctagcattgctcacattcatatagatgttaatgaatctag 74
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 54.0 bits (27), Expect = 4e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
||||| ||| |||| | |||||| ||| | ||||||||||| |||||||||||||||||
Sbjct: 147 tttcataatataagactttctagtattgcccatattcatatagatgttaatgaacctag 89
>RF00906;MIR1122;AAAA02025818.1/4289-4148 39946:Oryza sativa
Indica Group
Length = 142
Score = 54.0 bits (27), Expect = 4e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgt 48
||||| |||||||||||||||| |||||| || |||||||| |||||
Sbjct: 16 tttcataatgtaagtcattctaacatttctcacattcatatggatgt 62
Score = 48.1 bits (24), Expect = 2e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 71 gaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||| |||||||| ||||||| ||||||||||| ||||
Sbjct: 44 gaaatgttagaatgacttacattatgaaacggagggagta 5
Score = 48.1 bits (24), Expect = 2e-05
Identities = 51/60 (85%)
Strand = Plus / Minus
Query: 8 aatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctaggcatata 67
|||||||||||||||| ||||| || |||| ||| ||||||| |||| |||| ||||||
Sbjct: 121 aatgtaagtcattctaacattttccacattcgtatggatgttagtgaatctagacatata 62
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaa 55
|||||||||||||| | |||||||||| | || || ||||| ||||||||||||
Sbjct: 147 tttcacaatgtaagactttctagcattgctcacatacatatagatgttaatgaa 94
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 73 aatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||| | ||||||||||||||||||||||||
Sbjct: 121 aatgctagaaagtcttacattgtgaaacggaggaagta 158
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa
Japonica Group
Length = 146
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaa 55
||||| |||||||| | |||||||||| | || |||||||| ||||||||||||
Sbjct: 16 tttcataatgtaagactttctagcattgcccacattcatatagatgttaatgaa 69
>RF00906;MIR1122;AAAA02001474.1/15209-15351 39946:Oryza sativa
Indica Group
Length = 143
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 73 aatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||| | ||||||||||||||||||||||||
Sbjct: 102 aatgctagaaagtcttacattgtgaaacggaggaagta 139
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 73 aatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||| | ||| ||||||||||||||||||||
Sbjct: 42 aatgctagaaaggcttagattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaa 55
|||||||||||||| | |||||||||| | || |||||| | ||||||||||||
Sbjct: 16 tttcacaatgtaagactttctagcattacccacattcatttagatgttaatgaa 69
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaa 55
|||||||||||||| | |||||||||| | | |||||||| ||||||||||||
Sbjct: 147 tttcacaatgtaagactttctagcattgcccgcattcatatagatgttaatgaa 94
Score = 48.1 bits (24), Expect = 2e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagtag 111
|||| |||||||||| | ||||||| |||||||||||||||||
Sbjct: 47 tgggcaatgctagaaagtcttacattatgaaacggaggaagtag 4
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 73 aatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||| | ||||||||||||||||||| ||||
Sbjct: 121 aatgctagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AC134931.2/49884-50026 39947:Oryza sativa Japonica
Group
Length = 143
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatg 47
||||| ||| |||||||||||||||||| |||||| |||||||||
Sbjct: 128 tttcataatataagtcattctagcattttccatatttatattgatg 83
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagta 110
|||| ||||||||| ||||||| ||||||||||| ||||
Sbjct: 43 aaatactagaatgacttacattatgaaacggagggagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 65 atatgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||| |||||||||||||| ||| ||| ||||| ||||| ||||
Sbjct: 94 atatggaaaatgctagaatgacttatattatgaaatggagggagta 139
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 19 ttctagcatttcacatattcatattgatgttaatgaacctaggcatatat 68
|||||||||| | || |||||||| |||||||||||| ||||||| ||||
Sbjct: 106 ttctagcattgcccacattcatatagatgttaatgaatctaggcacatat 57
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaa 55
||||| |||||||| | |||||||||| | || |||||||| ||||||||||||
Sbjct: 129 tttcataatgtaagactttctagcattgcccacattcatatagatgttaatgaa 76
>RF00906;MIR1122;AL928776.4/138726-138875 4530:Oryza sativa (rice)
Length = 150
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 71 gaaatgctagaatgatttacattgtgaaacggaggaagtag 111
||||||||||||||| ||||||| ||||||| ||| |||||
Sbjct: 107 gaaatgctagaatgacttacattatgaaacgaagggagtag 147
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttc 30
||||| |||||||||||||||||||||||
Sbjct: 135 tttcataatgtaagtcattctagcatttc 107
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 72 aaatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||||||| ||| ||| ||||||||||| ||||
Sbjct: 43 aaatgctagaatgacttatattatgaaacggagggagta 5
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 50.1 bits (25), Expect = 6e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 19 ttctagcatttcacatattcatattgatgttaatgaacctaggca 63
|||||||||| | || |||||||| |||||||||||| |||||||
Sbjct: 106 ttctagcattgcccacattcatatagatgttaatgaatctaggca 62
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa Japonica
Group
Length = 160
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 87 ttacattgtgaaacggaggaagtag 111
|||||||||||||||||||||||||
Sbjct: 133 ttacattgtgaaacggaggaagtag 157
>RF00906;MIR1122;AACV01015348.1/13831-13958 39947:Oryza sativa
Japonica Group
Length = 128
Score = 50.1 bits (25), Expect = 6e-06
Identities = 88/109 (80%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||| |||||||| | |||||||||| || |||||||| ||||||||| || ||||
Sbjct: 16 tttcataatgtaagactttctagcattgtccacattcatatagatgttaataaatctaga 75
Query: 62 catatatgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|| || || |||||||||| | ||||||| ||||||||||| ||||
Sbjct: 76 tatgtacaggcaatgctagaaagtcttacattatgaaacggagggagta 124
>RF00906;MIR1122;AAAA02005296.1/3507-3647 39946:Oryza sativa Indica
Group
Length = 141
Score = 48.1 bits (24), Expect = 2e-05
Identities = 54/64 (84%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||| |||||||| | |||||||||| |||||| |||| |||||||||||| ||||
Sbjct: 126 tttcataatgtaagactttctagcattgtccatatttatatagatgttaatgaatctaga 67
Query: 62 cata 65
||||
Sbjct: 66 cata 63
>RF00906;MIR1122;AL662959.3/120503-120618 39947:Oryza sativa
Japonica Group
Length = 116
Score = 48.1 bits (24), Expect = 2e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 25 catttcacatattcatattgatgttaatgaacctaggcatatat 68
|||||| || ||||||||||||| ||||||| |||| |||||||
Sbjct: 5 catttcccacattcatattgatgctaatgaaactagacatatat 48
>RF00906;MIR1122;AY946768.1/117-30 4530:Oryza sativa (rice)
Length = 88
Score = 48.1 bits (24), Expect = 2e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 21 ctagcatttcacatattcatattgatgttaatgaacctag 60
|||||||||| || |||||||||||||| |||||| ||||
Sbjct: 88 ctagcatttcccacattcatattgatgtcaatgaatctag 49
>RF00906;MIR1122;AAAA02020840.1/4681-4804 39946:Oryza sativa Indica
Group
Length = 124
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 87 ttacattgtgaaacggaggaagta 110
||||||||||||||||||||||||
Sbjct: 28 ttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa
Japonica Group
Length = 162
Score = 48.1 bits (24), Expect = 2e-05
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
||||| |||||||| | |||||||||| | |||||||| |||||||||||| ||||
Sbjct: 16 tttcataatgtaagactttctagcattgtctacattcatatagatgttaatgaatctaga 75
Query: 62 catatatg 69
||||||||
Sbjct: 76 catatatg 83
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 73 aatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||| | ||||||| ||||||||||||||||
Sbjct: 42 aatgctagaaagtcttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 87 ttacattgtgaaacggaggaagta 110
||||||||||||||||||||||||
Sbjct: 28 ttacattgtgaaacggaggaagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 68 tgggaaatgctagaatgatttacattgtgaaacggaggaagta 110
|||| |||||||||| | ||||||||||||||||||| ||||
Sbjct: 116 tgggcaatgctagaaagtcttacattgtgaaacggagggagta 158
Score = 44.1 bits (22), Expect = 4e-04
Identities = 55/66 (83%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctagg 61
|||||||||||||| | |||||||||| | || || ||| | ||||||||| || ||||
Sbjct: 147 tttcacaatgtaagactttctagcattgcccacatacatttagatgttaataaatctaga 88
Query: 62 catata 67
||||||
Sbjct: 87 catata 82
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 87 ttacattgtgaaacggaggaagta 110
||||||||||||||||||||||||
Sbjct: 28 ttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP008210.1/99369-99480 39947:Oryza sativa
Japonica Group
Length = 112
Score = 48.1 bits (24), Expect = 2e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 6 acaatgtaagtcattctagcatttcacatattcatattgatgtt 49
|||||||||| | |||||||||| | ||||||||||| ||||||
Sbjct: 93 acaatgtaagactttctagcattgctcatattcatatagatgtt 50
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 73 aatgctagaatgatttacattgtgaaacggaggaa 107
|||||||||| | |||||||| |||||||||||||
Sbjct: 42 aatgctagaaagttttacattatgaaacggaggaa 8
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 46.1 bits (23), Expect = 1e-04
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaat 52
|||||||||||||| | |||||||||| || |||||||| |||||||||
Sbjct: 129 tttcacaatgtaagactttctagcattgtccacattcatatagatgttaat 79
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 73 aatgctagaatgatttacattgtgaaacggaggaagtag 111
|||||||||| | ||||||||||||||||||| |||||
Sbjct: 103 aatgctagaaagtcttacattgtgaaacggagggagtag 141
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
||||| |||||||| | |||||||||| || |||||||| |||||||||||| ||||
Sbjct: 121 tttcataatgtaagactttctagcattgtccacattcatatagatgttaatgaatctag 63
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
|||||||||||||| | ||||| |||| | || |||||||| |||| ||||||| ||||
Sbjct: 147 tttcacaatgtaagactttctaacattgcccacattcatatagatgctaatgaatctag 89
>RF00906;MIR1122;AAAA02004204.1/27138-27249 39946:Oryza sativa
Indica Group
Length = 112
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaacctag 60
||||| |||||||| | |||||||||| ||||||||||| |||||||| ||| ||||
Sbjct: 16 tttcataatgtaagactttctagcattaaccatattcatatagatgttaacgaatctag 74
>RF00906;MIR1122;AACV01022002.1/8629-8715 39947:Oryza sativa
Japonica Group
Length = 87
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 76 gctagaatgatttacattgtgaaacggaggaagta 110
||||||| || ||||||| ||||||||||||||||
Sbjct: 39 gctagaaagacttacattatgaaacggaggaagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 73 aatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||| || ||||||| ||||||||||| ||||
Sbjct: 46 aatgctagaaagacttacattatgaaacggagggagta 83
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 46.1 bits (23), Expect = 1e-04
Identities = 56/66 (84%), Gaps = 2/66 (3%)
Strand = Plus / Minus
Query: 19 ttctagcatttcacatattcatattgatgttaatgaacctaggcat--atatgggaaatg 76
|||||||||| | || |||||||| |||||||||||| |||| ||| || |||| ||||
Sbjct: 98 ttctagcattgcccacattcatatagatgttaatgaatctagacatgaatgtgggcaatg 39
Query: 77 ctagaa 82
||||||
Sbjct: 38 ctagaa 33
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 19 ttctagcatttcacatattcatattgatgttaatgaacctag 60
|||||||||| | || |||||||| |||||||||||| ||||
Sbjct: 5 ttctagcattgcccacattcatatggatgttaatgaatctag 46
>RF00906;MIR1122;AAAA02008612.1/21224-21346 39946:Oryza sativa
Indica Group
Length = 123
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 73 aatgctagaatgatttacattgtgaaacggaggaagta 110
|||||||||| | ||||||||||||||||||| ||||
Sbjct: 42 aatgctagaaagccttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01007664.1/4730-4831 39947:Oryza sativa
Japonica Group
Length = 102
Score = 44.1 bits (22), Expect = 4e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatg 47
||||| |||||||| | |||||||||| | ||||||||||| ||||
Sbjct: 16 tttcataatgtaagactttctagcattgcccatattcatatagatg 61
>RF00906;MIR1122;BX649219.2/156146-156263 4530:Oryza sativa (rice)
Length = 118
Score = 44.1 bits (22), Expect = 4e-04
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaa 55
|||||||||||||| | ||||||| || | || |||||||| ||| ||||||||
Sbjct: 103 tttcacaatgtaagactttctagcgttgcccacattcatatagatattaatgaa 50
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 44.1 bits (22), Expect = 4e-04
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaa 55
||||||||| |||| | |||||||||| | || || ||||| ||||||||||||
Sbjct: 125 tttcacaatataagactttctagcattacccacatacatatagatgttaatgaa 72
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 44.1 bits (22), Expect = 4e-04
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 2 tttcacaatgtaagtcattctagcatttcacatattcatattgatgttaatgaa 55
||||||||| |||| | |||||||||| | || || ||||| ||||||||||||
Sbjct: 16 tttcacaatataagactttctagcattacccacatacatatagatgttaatgaa 69
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 44.1 bits (22), Expect = 4e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 19 ttctagcatttcacatattcatattgatgttaatgaacctaggcatatat 68
|||||||||| | || |||||||| ||||||||||| |||| |||||||
Sbjct: 104 ttctagcattacccacattcatatatatgttaatgaatctagacatatat 55
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 44.1 bits (22), Expect = 4e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 19 ttctagcatttcacatattcatattgatgttaatgaacctag 60
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Sbjct: 131 ttctagcattgcccacattcatatagatgttaatgaatctag 90
