miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01914;mir-932;AE014134.5/6902062-6902157 7227:Drosophila
melanogaster (fruit fly)
Length = 96
Score = 180 bits (91), Expect = 2e-45
Identities = 94/95 (98%)
Strand = Plus / Plus
Query: 6 ttggttttgaagttttcaattccgtagtgcattgcagtgtgtttaattatttactgcaag 65
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1 ttggttttgaagttttcaattccgtagtgcattgcagtgtgtttcattatttactgcaag 60
Query: 66 cgctgcggatttggcaactttgacgaccttcatca 100
|||||||||||||||||||||||||||||||||||
Sbjct: 61 cgctgcggatttggcaactttgacgaccttcatca 95
>RF01914;mir-932;AAPU01010633.1/174895-174800 7230:Drosophila
mojavensis
Length = 96
Score = 61.9 bits (31), Expect = 1e-09
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 19 tttcaattccgtagtgcattgcagtgtgtttaattatttactgcaagcgctgcggatttg 78
||||||||||||||||||||||||| ||||| | |||||||||||||||| || |||
Sbjct: 14 tttcaattccgtagtgcattgcagttgatttaaggaattactgcaagcgctgcagaattg 73
Query: 79 gca 81
|||
Sbjct: 74 gca 76
>RF01914;mir-932;AAPP01015704.1/12304-12399 7217:Drosophila
ananassae
Length = 96
Score = 58.0 bits (29), Expect = 2e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 19 tttcaattccgtagtgcattgcagtgtgtttaa 51
||||||||||||||||||||||||||| |||||
Sbjct: 14 tttcaattccgtagtgcattgcagtgtttttaa 46
>RF01914;mir-932;AAGE02028378.1/72320-72226 7159:Aedes aegypti
(yellow fever mosquito)
Length = 95
Score = 54.0 bits (27), Expect = 3e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 20 ttcaattccgtagtgcattgcagtgtg 46
|||||||||||||||||||||||||||
Sbjct: 15 ttcaattccgtagtgcattgcagtgtg 41
>RF01914;mir-932;AAWU01016737.1/86715-86620 7176:Culex
quinquefasciatus (southern house mosquito)
Length = 96
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 20 ttcaattccgtagtgcattgcagtgt 45
||||||||||||||||||||||||||
Sbjct: 15 ttcaattccgtagtgcattgcagtgt 40
>RF01914;mir-932;AAJJ01002053.1/7803-7708 7070:Tribolium castaneum
(red flour beetle)
Length = 96
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 20 ttcaattccgtagtgcattgcagtgt 45
||||||||||||||||||||||||||
Sbjct: 15 ttcaattccgtagtgcattgcagtgt 40
>RF01914;mir-932;BAAB01137739.1/1246-1338 7091:Bombyx mori
(domestic silkworm)
Length = 93
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 20 ttcaattccgtagtgcattgcagtg 44
|||||||||||||||||||||||||
Sbjct: 15 ttcaattccgtagtgcattgcagtg 39
>RF01914;mir-932;ABKP02013651.1/12768-12666 377271:Anopheles
gambiae M
Length = 103
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 21 tcaattccgtagtgcattgcagtgt 45
|||||||||||||||||||||||||
Sbjct: 17 tcaattccgtagtgcattgcagtgt 41
>RF01914;mir-932;AAZX01016972.1/3751-3654 7425:Nasonia vitripennis
(jewel wasp)
Length = 98
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 20 ttcaattccgtagtgcattgcagt 43
||||||||||||||||||||||||
Sbjct: 15 ttcaattccgtagtgcattgcagt 38
>RF01914;mir-932;AAQB01006833.1/85025-84930 7260:Drosophila
willistoni
Length = 96
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 tcaattccgtagtgcattgcagt 43
|||||||||||||||||||||||
Sbjct: 16 tcaattccgtagtgcattgcagt 38
>RF01914;mir-932;AAFS01000131.1/45997-46096 46245:Drosophila
pseudoobscura pseudoobscura
Length = 100
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 tcaattccgtagtgcattgcagt 43
|||||||||||||||||||||||
Sbjct: 16 tcaattccgtagtgcattgcagt 38
