miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01997;mir-969;AAKO01001720.1/3343-3447 7238:Drosophila sechellia
Length = 105
Score = 196 bits (99), Expect = 4e-50
Identities = 99/99 (100%)
Strand = Plus / Plus
Query: 9 aagtctctgtcctacgtccgagttccactaagcaagttttgagatcgttttaaaaacaaa 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagtctctgtcctacgtccgagttccactaagcaagttttgagatcgttttaaaaacaaa 60
Query: 69 aacttgacacgttgagctcgttcgtgggatggactactg 107
|||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aacttgacacgttgagctcgttcgtgggatggactactg 99
>RF01997;mir-969;AAPP01019211.1/37252-37149 7217:Drosophila
ananassae
Length = 104
Score = 111 bits (56), Expect = 2e-24
Identities = 71/76 (93%)
Strand = Plus / Plus
Query: 21 tacgtccgagttccactaagcaagttttgagatcgttttaaaaacaaaaacttgacacgt 80
||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 12 tacgtgcgagttccactaagcaagttttgagaattttttaaaaacaaaaacttgacacgt 71
Query: 81 tgagctcgttcgtggg 96
||||||||| ||||||
Sbjct: 72 tgagctcgtccgtggg 87
>RF01997;mir-969;AAQB01008838.1/4488-4586 7260:Drosophila
willistoni
Length = 99
Score = 77.8 bits (39), Expect = 3e-14
Identities = 66/75 (88%)
Strand = Plus / Plus
Query: 15 ctgtcctacgtccgagttccactaagcaagttttgagatcgttttaaaaacaaaaacttg 74
|||||||||| |||||||||||||||||||||| | ||| |||||||||||||||
Sbjct: 4 ctgtcctacgcatgagttccactaagcaagttttgggcatatttcaaaaacaaaaacttg 63
Query: 75 acacgttgagctcgt 89
|||||||||||||||
Sbjct: 64 acacgttgagctcgt 78
>RF01997;mir-969;AAPU01009701.1/40639-40741 7230:Drosophila
mojavensis
Length = 103
Score = 71.9 bits (36), Expect = 2e-12
Identities = 66/75 (88%), Gaps = 2/75 (2%)
Strand = Plus / Plus
Query: 15 ctgtcctacgtccgagttccactaagcaagttttgagatcgttttaaaaacaaaaacttg 74
|||||||||| ||||||||||||| ||||||||||| ||| |||| ||||||||||
Sbjct: 7 ctgtcctacgagcgagttccactaatcaagttttgagt--gttcgaaaatcaaaaacttg 64
Query: 75 acacgttgagctcgt 89
|||||||||||||||
Sbjct: 65 acacgttgagctcgt 79
>RF01997;mir-969;AAPT01021333.1/25650-25757 7222:Drosophila
grimshawi
Length = 108
Score = 58.0 bits (29), Expect = 3e-08
Identities = 57/64 (89%), Gaps = 3/64 (4%)
Strand = Plus / Plus
Query: 27 cgagttccactaagcaagttttgagatcgt-tttaaaaacaaaaacttgacacgttgagc 85
|||||||||||| ||||||||||| ||| ||| ||| |||||||||||||||||||||
Sbjct: 19 cgagttccactattcaagttttgag--cgtatttgaaatcaaaaacttgacacgttgagc 76
Query: 86 tcgt 89
||||
Sbjct: 77 tcgt 80
>RF01997;mir-969;AAFS01000106.1/97676-97569 46245:Drosophila
pseudoobscura pseudoobscura
Length = 108
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 65 caaaaacttgacacgttgagctcgttcgtgg 95
||||||||||||||||||||||||| |||||
Sbjct: 56 caaaaacttgacacgttgagctcgtgcgtgg 86
>RF01997;mir-969;AANI01015309.1/11735-11628 7244:Drosophila
virilis
Length = 108
Score = 54.0 bits (27), Expect = 4e-07
Identities = 69/83 (83%)
Strand = Plus / Plus
Query: 14 tctgtcctacgtccgagttccactaagcaagttttgagatcgttttaaaaacaaaaactt 73
|||| |||||| ||||||||||||| ||||||||||| || ||| | |||||||
Sbjct: 4 tctgccctacgcacgagttccactaatcaagttttgagcggattcgaaagtcgaaaactt 63
Query: 74 gacacgttgagctcgttcgtggg 96
|||||||||||||||| ||||||
Sbjct: 64 gacacgttgagctcgtccgtggg 86
