miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01926;mir-981;AABU01002762.1/8939148-8939258 7227:Drosophila
melanogaster (fruit fly)
Length = 111
Score = 212 bits (107), Expect = 8e-55
Identities = 110/111 (99%)
Strand = Plus / Plus
Query: 2 ttaggataaacatcctcactgaagtcgggtttcgttagcagcgggctgttttaataaatt 61
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttaggagaaacatcctcactgaagtcgggtttcgttagcagcgggctgttttaataaatt 60
Query: 62 caacaagttcgttgtcgacgaaacctgcatgctgtgtggaaaatcaacgct 112
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 caacaagttcgttgtcgacgaaacctgcatgctgtgtggaaaatcaacgct 111
>RF01926;mir-981;AAFS01000238.1/65682-65572 46245:Drosophila
pseudoobscura pseudoobscura
Length = 111
Score = 107 bits (54), Expect = 3e-23
Identities = 77/82 (93%), Gaps = 2/82 (2%)
Strand = Plus / Plus
Query: 21 tgaagtcgggtttcgttagcagcgggctgtttt-aataaattcaacaagttcgttgtcga 79
|||| ||||||||||||| |||||||||||| | ||||||| ||||||||||||||||||
Sbjct: 20 tgaaatcgggtttcgttaacagcgggctgttatgaataaat-caacaagttcgttgtcga 78
Query: 80 cgaaacctgcatgctgtgtgga 101
||||||||||||||||||||||
Sbjct: 79 cgaaacctgcatgctgtgtgga 100
>RF01926;mir-981;AAPP01015855.1/4220-4330 7217:Drosophila ananassae
Length = 111
Score = 105 bits (53), Expect = 1e-22
Identities = 80/89 (89%)
Strand = Plus / Plus
Query: 14 tcctcactgaagtcgggtttcgttagcagcgggctgttttaataaattcaacaagttcgt 73
|||||||||||| |||||||||||| ||||||||||| | || |||||||||||||
Sbjct: 13 tcctcactgaagccgggtttcgttaacagcgggctgtcatttcgaaatcaacaagttcgt 72
Query: 74 tgtcgacgaaacctgcatgctgtgtggaa 102
|||||||||||||||||||||||||||||
Sbjct: 73 tgtcgacgaaacctgcatgctgtgtggaa 101
>RF01926;mir-981;AAPU01008298.1/3476-3586 7230:Drosophila mojavensis
Length = 111
Score = 73.8 bits (37), Expect = 4e-13
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 29 ggtttcgttagcagcgggctgttttaataaattcaacaagttcgttgtcgacgaaacctg 88
||||||||||||| |||||||| | || || ||||||||||||||||||||||||||
Sbjct: 28 ggtttcgttagcaacgggctgtgatgattaaaagaacaagttcgttgtcgacgaaacctg 87
Query: 89 catgctgtgtgga 101
|||||| ||||||
Sbjct: 88 catgctatgtgga 100
>RF01926;mir-981;AAPT01018880.1/172410-172517 7222:Drosophila
grimshawi
Length = 108
Score = 71.9 bits (36), Expect = 2e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 63 aacaagttcgttgtcgacgaaacctgcatgctgtgtggaaaatcaacg 110
||||||||||||||||||||||||||||| ||||||||| | ||||||
Sbjct: 59 aacaagttcgttgtcgacgaaacctgcatactgtgtggagagtcaacg 106
>RF01926;mir-981;AANI01015799.1/578-686 7244:Drosophila virilis
Length = 109
Score = 69.9 bits (35), Expect = 7e-12
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 63 aacaagttcgttgtcgacgaaacctgcatgctgtgtgga 101
||||||||||||||||||||||||||||| |||||||||
Sbjct: 60 aacaagttcgttgtcgacgaaacctgcatactgtgtgga 98
>RF01926;mir-981;AAQB01008759.1/20932-21051 7260:Drosophila
willistoni
Length = 120
Score = 58.0 bits (29), Expect = 3e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 63 aacaagttcgttgtcgacgaaacctgcat 91
|||||||||||||||||||||||||||||
Sbjct: 70 aacaagttcgttgtcgacgaaacctgcat 98
>RF01926;mir-981;AAWU01022546.1/521-633 7176:Culex
quinquefasciatus (southern house mosquito)
Length = 113
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 67 agttcgttgtcgacgaaacctgca 90
||||||||||||||||||||||||
Sbjct: 68 agttcgttgtcgacgaaacctgca 91
>RF01926;mir-981;AAGE02007302.1/184866-184756 7159:Aedes aegypti
(yellow fever mosquito)
Length = 111
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 67 agttcgttgtcgacgaaacctgca 90
||||||||||||||||||||||||
Sbjct: 66 agttcgttgtcgacgaaacctgca 89
>RF01926;mir-981;ABKP02011026.1/463-579 377271:Anopheles gambiae M
Length = 117
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 69 ttcgttgtcgacgaaacctgca 90
||||||||||||||||||||||
Sbjct: 74 ttcgttgtcgacgaaacctgca 95
