miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00865;MIR169_5;ABXC01005011.1/62536-62662 4558:Sorghum bicolor
(sorghum)
Length = 127
Score = 176 bits (89), Expect = 6e-44
Identities = 121/129 (93%), Gaps = 2/129 (1%)
Strand = Plus / Plus
Query: 22 gcaataggggccactcaggctagccaaggagactgcctacgaaccaacacaaaggtccac 81
||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| |||
Sbjct: 1 gcaataggggccactcaggctagccaaggagactgcctatgaaccaactcaaaggttcac 60
Query: 82 aattctgatcctttgtaaacaaaggacataggcaagtcatccttggctatcagaggcagg 141
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 -attctgatcctttg-ggacaaaggacataggcaagtcatccttggctatcagaggcaga 118
Query: 142 cccttattg 150
|||||||||
Sbjct: 119 cccttattg 127
>RF00645;MIR169_2;BT062831.1/323-237 4577:Zea mays
Length = 87
Score = 172 bits (87), Expect = 1e-42
Identities = 87/87 (100%)
Strand = Plus / Minus
Query: 43 agccaaggagactgcctacgaaccaacacaaaggtccacaattctgatcctttgtaaaca 102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87 agccaaggagactgcctacgaaccaacacaaaggtccacaattctgatcctttgtaaaca 28
Query: 103 aaggacataggcaagtcatccttggct 129
|||||||||||||||||||||||||||
Sbjct: 27 aaggacataggcaagtcatccttggct 1
>RF00645;MIR169_2;ABXC01005011.1/62641-62556 4558:Sorghum bicolor
(sorghum)
Length = 86
Score = 103 bits (52), Expect = 8e-22
Identities = 81/88 (92%), Gaps = 2/88 (2%)
Strand = Plus / Minus
Query: 42 tagccaaggagactgcctacgaaccaacacaaaggtccacaattctgatcctttgtaaac 101
||||||||||||||||||| |||||||| ||||||| |||| ||||||||||||| | |
Sbjct: 86 tagccaaggagactgcctatgaaccaactcaaaggttcaca-ttctgatcctttggga-c 29
Query: 102 aaaggacataggcaagtcatccttggct 129
||||||||||||||||||||||||||||
Sbjct: 28 aaaggacataggcaagtcatccttggct 1
>RF00645;MIR169_2;ABXC01005012.1/1911-1797 4558:Sorghum bicolor
(sorghum)
Length = 115
Score = 99.6 bits (50), Expect = 1e-20
Identities = 100/115 (86%), Gaps = 5/115 (4%)
Strand = Plus / Minus
Query: 29 gggccactcaggctagccaaggagactgcctacgaaccaaca----caaaggtccacaat 84
|||||||||||||||||||||||||||||||| |||||| | |||||| |||| |
Sbjct: 114 gggccactcaggctagccaaggagactgcctatgaaccatctatctcaaaggctcacatt 55
Query: 85 tctgatcctttgtaaacaaaggacataggcaagtcatccttggctatcagaggca 139
|||||||||| | | ||||||||| |||||||||||||||||||||||||||||
Sbjct: 54 tctgatccttcggca-caaaggacacaggcaagtcatccttggctatcagaggca 1
>RF00865;MIR169_5;AACV01009625.1/5578-5722 39947:Oryza sativa
Japonica Group
Length = 145
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 31 gccactcaggctagccaaggagactgccta 60
||||||||||||||||||||||||||||||
Sbjct: 10 gccactcaggctagccaaggagactgccta 39
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 109 ataggcaagtcatccttggctatcagaggcaggc 142
|||||||||||||||||||||| |||||||||||
Sbjct: 104 ataggcaagtcatccttggctaccagaggcaggc 137
>RF00645;MIR169_2;AP008210.1/19428619-19428750 39947:Oryza sativa
Japonica Group
Length = 132
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 109 ataggcaagtcatccttggctatcagaggcaggc 142
|||||||||||||||||||||| |||||||||||
Sbjct: 35 ataggcaagtcatccttggctaccagaggcaggc 2
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 31 gccactcaggctagccaaggagactgccta 60
||||||||||||||||||||||||||||||
Sbjct: 129 gccactcaggctagccaaggagactgccta 100
>RF00865;MIR169_5;AAAA02026107.1/14351-14478 39946:Oryza sativa
Indica Group
Length = 128
Score = 58.0 bits (29), Expect = 4e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 104 aggacataggcaagtcatccttggctatcagag 136
|||||| ||||||||||||||||||||||||||
Sbjct: 82 aggacacaggcaagtcatccttggctatcagag 114
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 32 ccactcaggctagccaaggagactgcctacgaacca 67
||||||||||||||||||||||||||| | ||||||
Sbjct: 11 ccactcaggctagccaaggagactgcccatgaacca 46
>RF00645;MIR169_2;AAAA02026107.1/14467-14357 39946:Oryza sativa
Indica Group
Length = 111
Score = 58.0 bits (29), Expect = 4e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 104 aggacataggcaagtcatccttggctatcagag 136
|||||| ||||||||||||||||||||||||||
Sbjct: 36 aggacacaggcaagtcatccttggctatcagag 4
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 32 ccactcaggctagccaaggagactgcctacgaacca 67
||||||||||||||||||||||||||| | ||||||
Sbjct: 107 ccactcaggctagccaaggagactgcccatgaacca 72
>RF00865;MIR169_5;AASG02006505.1/277-428 3988:Ricinus communis
(castor bean)
Length = 152
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 104 aggacataggcaagtcatccttggctatca 133
|||| |||||||||||||||||||||||||
Sbjct: 106 aggaaataggcaagtcatccttggctatca 135
>RF00865;MIR169_5;AP004464.3/58814-58687 39947:Oryza sativa
Japonica Group
Length = 128
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 34 actcaggctagccaaggagactgcctacgaacca 67
|||||| |||||||||||||||||||| ||||||
Sbjct: 13 actcagactagccaaggagactgcctatgaacca 46
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 103 aaggacataggcaagtcatccttggctatcagag 136
||||||| |||||||||||||||||||| |||||
Sbjct: 81 aaggacacaggcaagtcatccttggctaccagag 114
>RF00865;MIR169_5;AK240880.1/275-135 39947:Oryza sativa Japonica
Group
Length = 141
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 33 cactcaggctagccaaggagactgcc 58
||||||||||||||||||||||||||
Sbjct: 12 cactcaggctagccaaggagactgcc 37
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 103 aaggacataggcaagtcatccttggctatcagag 136
||||||| |||||||||||||||||||| |||||
Sbjct: 94 aaggacacaggcaagtcatccttggctaccagag 127
>RF00645;MIR169_2;AASG02006505.1/420-283 3988:Ricinus communis
(castor bean)
Length = 138
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 104 aggacataggcaagtcatccttggctatca 133
|||| |||||||||||||||||||||||||
Sbjct: 39 aggaaataggcaagtcatccttggctatca 10
>RF00645;MIR169_2;AP004464.3/58694-58808 39947:Oryza sativa Japonica
Group
Length = 115
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 103 aaggacataggcaagtcatccttggctatcagag 136
||||||| |||||||||||||||||||| |||||
Sbjct: 41 aaggacacaggcaagtcatccttggctaccagag 8
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 34 actcaggctagccaaggagactgcctacgaacca 67
|||||| |||||||||||||||||||| ||||||
Sbjct: 109 actcagactagccaaggagactgcctatgaacca 76
>RF00645;MIR169_2;CT835986.1/139-261 39946:Oryza sativa Indica Group
Length = 123
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 103 aaggacataggcaagtcatccttggctatcagag 136
||||||| |||||||||||||||||||| |||||
Sbjct: 36 aaggacacaggcaagtcatccttggctaccagag 3
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 33 cactcaggctagccaaggagactgcc 58
||||||||||||||||||||||||||
Sbjct: 118 cactcaggctagccaaggagactgcc 93
>RF00865;MIR169_5;AASG02003941.1/7918-8066 3988:Ricinus communis
(castor bean)
Length = 149
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 111 aggcaagtcatccttggctatcaga 135
|||||||||||||||||||||||||
Sbjct: 111 aggcaagtcatccttggctatcaga 135
>RF00865;MIR169_5;CAAP02000001.1/222751-222589 29760:Vitis vinifera
Length = 163
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 111 aggcaagtcatccttggctatcaga 135
|||||||||||||||||||||||||
Sbjct: 125 aggcaagtcatccttggctatcaga 149
>RF00865;MIR169_5;ABXC01004203.1/1754-1629 4558:Sorghum bicolor
(sorghum)
Length = 126
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 110 taggcaagtcatccttggctatcagaggcaggc 142
||||||||||||||||||||| || ||||||||
Sbjct: 86 taggcaagtcatccttggctaccaaaggcaggc 118
>RF00865;MIR169_5;ABXC01004204.1/1140-1015 4558:Sorghum bicolor
(sorghum)
Length = 126
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 110 taggcaagtcatccttggctatcagaggcaggc 142
||||||||||||||||||||| || ||||||||
Sbjct: 86 taggcaagtcatccttggctaccaaaggcaggc 118
>RF00865;MIR169_5;AY551246.1/188-45 4530:Oryza sativa (rice)
Length = 144
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 35 ctcaggctagccaaggagactgcct 59
|||||||||||||||||||||||||
Sbjct: 14 ctcaggctagccaaggagactgcct 38
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 106 gacataggcaagtcatccttggctatcaga 135
|||| |||||||||||||||||||| ||||
Sbjct: 100 gacacaggcaagtcatccttggctaccaga 129
>RF00645;MIR169_2;AASG02003941.1/8059-7924 3988:Ricinus communis
(castor bean)
Length = 136
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 111 aggcaagtcatccttggctatcaga 135
|||||||||||||||||||||||||
Sbjct: 32 aggcaagtcatccttggctatcaga 8
>RF00645;MIR169_2;AM487000.2/29208-29357 29760:Vitis vinifera
Length = 150
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 111 aggcaagtcatccttggctatcaga 135
|||||||||||||||||||||||||
Sbjct: 32 aggcaagtcatccttggctatcaga 8
>RF00645;MIR169_2;ABXC01004203.1/1636-1748 4558:Sorghum bicolor
(sorghum)
Length = 113
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 110 taggcaagtcatccttggctatcagaggcaggc 142
||||||||||||||||||||| || ||||||||
Sbjct: 34 taggcaagtcatccttggctaccaaaggcaggc 2
>RF00645;MIR169_2;ABXC01004204.1/1022-1134 4558:Sorghum bicolor
(sorghum)
Length = 113
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 110 taggcaagtcatccttggctatcagaggcaggc 142
||||||||||||||||||||| || ||||||||
Sbjct: 34 taggcaagtcatccttggctaccaaaggcaggc 2
>RF00645;MIR169_2;AC137595.2/89199-89329 39947:Oryza sativa Japonica
Group
Length = 131
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 35 ctcaggctagccaaggagactgcct 59
|||||||||||||||||||||||||
Sbjct: 124 ctcaggctagccaaggagactgcct 100
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 106 gacataggcaagtcatccttggctatcaga 135
|||| |||||||||||||||||||| ||||
Sbjct: 38 gacacaggcaagtcatccttggctaccaga 9
>RF00865;MIR169_5;AARH01000583.1/30355-30198 3694:Populus
trichocarpa
Length = 158
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 36 tcaggctagccaaggagactgcct 59
||||||||||||||||||||||||
Sbjct: 15 tcaggctagccaaggagactgcct 38
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 111 aggcaagtcatccttggctatca 133
|||||||||||||||||||||||
Sbjct: 120 aggcaagtcatccttggctatca 142
>RF00865;MIR169_5;CU468266.5/4267-4422 3880:Medicago truncatula
(barrel medic)
Length = 156
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 110 taggcaagtcatccttggctatca 133
||||||||||||||||||||||||
Sbjct: 116 taggcaagtcatccttggctatca 139
>RF00865;MIR169_5;ABXC01005012.1/10458-10330 4558:Sorghum bicolor
(sorghum)
Length = 129
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 104 aggacataggcaagtcatccttggctatcaga 135
|||| |||||||||||||||||||||| ||||
Sbjct: 81 aggatataggcaagtcatccttggctaccaga 112
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 36 tcaggctagccaaggagactgcc 58
|||||||||||||||||||||||
Sbjct: 15 tcaggctagccaaggagactgcc 37
>RF00865;MIR169_5;ABXC01005012.1/7179-7306 4558:Sorghum bicolor
(sorghum)
Length = 128
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 104 aggacataggcaagtcatccttggctatcaga 135
|||| |||||||||||||||||||||| ||||
Sbjct: 83 aggatataggcaagtcatccttggctaccaga 114
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 36 tcaggctagccaaggagactgcc 58
|||||||||||||||||||||||
Sbjct: 15 tcaggctagccaaggagactgcc 37
>RF00645;MIR169_2;AARH01000583.1/30205-30349 3694:Populus
trichocarpa
Length = 145
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 36 tcaggctagccaaggagactgcct 59
||||||||||||||||||||||||
Sbjct: 137 tcaggctagccaaggagactgcct 114
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 111 aggcaagtcatccttggctatca 133
|||||||||||||||||||||||
Sbjct: 32 aggcaagtcatccttggctatca 10
>RF00645;MIR169_2;CU468266.5/4414-4273 3880:Medicago truncatula
(barrel medic)
Length = 142
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 110 taggcaagtcatccttggctatca 133
||||||||||||||||||||||||
Sbjct: 33 taggcaagtcatccttggctatca 10
>RF00645;MIR169_2;ABXC01005012.1/7295-7185 4558:Sorghum bicolor
(sorghum)
Length = 111
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 104 aggacataggcaagtcatccttggctatcaga 135
|||| |||||||||||||||||||||| ||||
Sbjct: 35 aggatataggcaagtcatccttggctaccaga 4
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 36 tcaggctagccaaggagactgcc 58
|||||||||||||||||||||||
Sbjct: 103 tcaggctagccaaggagactgcc 81
>RF00645;MIR169_2;ABXC01005012.1/10344-10452 4558:Sorghum bicolor
(sorghum)
Length = 109
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 104 aggacataggcaagtcatccttggctatcaga 135
|||| |||||||||||||||||||||| ||||
Sbjct: 35 aggatataggcaagtcatccttggctaccaga 4
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 36 tcaggctagccaaggagactgcc 58
|||||||||||||||||||||||
Sbjct: 101 tcaggctagccaaggagactgcc 79
>RF00865;MIR169_5;AARH01006471.1/67165-67023 3694:Populus
trichocarpa
Length = 143
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 104 aggacataggcaagtcatccttggcta 130
|||| ||||||||||||||||||||||
Sbjct: 95 aggaaataggcaagtcatccttggcta 121
>RF00865;MIR169_5;AARH01009234.1/70247-70410 3694:Populus
trichocarpa
Length = 164
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 111 aggcaagtcatccttggctatca 133
|||||||||||||||||||||||
Sbjct: 126 aggcaagtcatccttggctatca 148
>RF00865;MIR169_5;AASG02003632.1/18586-18737 3988:Ricinus communis
(castor bean)
Length = 152
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 111 aggcaagtcatccttggctatca 133
|||||||||||||||||||||||
Sbjct: 114 aggcaagtcatccttggctatca 136
>RF00865;MIR169_5;AASG02001447.1/39455-39304 3988:Ricinus communis
(castor bean)
Length = 152
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 42 tagccaaggagactgcctacgaa 64
|||||||||||||||||||||||
Sbjct: 21 tagccaaggagactgcctacgaa 43
>RF00645;MIR169_2;AARH01006471.1/67030-67159 3694:Populus
trichocarpa
Length = 130
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 104 aggacataggcaagtcatccttggcta 130
|||| ||||||||||||||||||||||
Sbjct: 42 aggaaataggcaagtcatccttggcta 16
>RF00645;MIR169_2;AC216452.1/111514-111664 3694:Populus trichocarpa
Length = 151
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 111 aggcaagtcatccttggctatca 133
|||||||||||||||||||||||
Sbjct: 32 aggcaagtcatccttggctatca 10
>RF00645;MIR169_2;AASG02003632.1/18730-18592 3988:Ricinus communis
(castor bean)
Length = 139
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 111 aggcaagtcatccttggctatca 133
|||||||||||||||||||||||
Sbjct: 32 aggcaagtcatccttggctatca 10
>RF00645;MIR169_2;AASG02001447.1/39312-39449 3988:Ricinus communis
(castor bean)
Length = 138
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 42 tagccaaggagactgcctacgaa 64
|||||||||||||||||||||||
Sbjct: 124 tagccaaggagactgcctacgaa 102
>RF00865;MIR169_5;ABIM01022203.1/1489-1639 3649:Carica papaya
(papaya)
Length = 151
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 111 aggcaagtcatccttggctatc 132
||||||||||||||||||||||
Sbjct: 113 aggcaagtcatccttggctatc 134
>RF00865;MIR169_5;AASG02003941.1/7647-7771 3988:Ricinus communis
(castor bean)
Length = 125
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 112 ggcaagtcatccttggctatca 133
||||||||||||||||||||||
Sbjct: 88 ggcaagtcatccttggctatca 109
>RF00865;MIR169_5;CAAP02000122.1/24661-24522 29760:Vitis vinifera
Length = 140
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 110 taggcaagtcatccttggctatcaga 135
||||||||||||||||||||| ||||
Sbjct: 101 taggcaagtcatccttggctaccaga 126
>RF00865;MIR169_5;EU968670.1/235-103 4577:Zea mays
Length = 133
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 111 aggcaagtcatccttggctatcagag 136
|||||||||||||||||||| |||||
Sbjct: 94 aggcaagtcatccttggctaccagag 119
>RF00865;MIR169_5;BT061088.1/1092-1244 4577:Zea mays
Length = 153
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 111 aggcaagtcatccttggctatc 132
||||||||||||||||||||||
Sbjct: 115 aggcaagtcatccttggctatc 136
>RF00865;MIR169_5;ABXC01001464.1/179344-179197 4558:Sorghum
bicolor (sorghum)
Length = 148
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 38 aggctagccaaggagactgcct 59
||||||||||||||||||||||
Sbjct: 17 aggctagccaaggagactgcct 38
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 111 aggcaagtcatccttggctatcagag 136
|||||||||||||||||||| |||||
Sbjct: 109 aggcaagtcatccttggctaccagag 134
>RF00865;MIR169_5;ABXC01001464.1/182182-182031 4558:Sorghum bicolor
(sorghum)
Length = 152
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 111 aggcaagtcatccttggctatc 132
||||||||||||||||||||||
Sbjct: 114 aggcaagtcatccttggctatc 135
>RF00865;MIR169_5;AACV01020369.1/3584-3757 39947:Oryza sativa
Japonica Group
Length = 174
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 111 aggcaagtcatccttggctatc 132
||||||||||||||||||||||
Sbjct: 136 aggcaagtcatccttggctatc 157
>RF00645;MIR169_2;ABIM01022203.1/1632-1495 3649:Carica papaya
(papaya)
Length = 138
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 111 aggcaagtcatccttggctatc 132
||||||||||||||||||||||
Sbjct: 32 aggcaagtcatccttggctatc 11
>RF00645;MIR169_2;AASG02003941.1/7763-7653 3988:Ricinus communis
(castor bean)
Length = 111
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 112 ggcaagtcatccttggctatca 133
||||||||||||||||||||||
Sbjct: 30 ggcaagtcatccttggctatca 9
>RF00645;MIR169_2;CAAP02000122.1/24529-24655 29760:Vitis vinifera
Length = 127
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 110 taggcaagtcatccttggctatcaga 135
||||||||||||||||||||| ||||
Sbjct: 33 taggcaagtcatccttggctaccaga 8
>RF00645;MIR169_2;EU968670.1/110-229 4577:Zea mays
Length = 120
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 111 aggcaagtcatccttggctatcagag 136
|||||||||||||||||||| |||||
Sbjct: 33 aggcaagtcatccttggctaccagag 8
>RF00645;MIR169_2;ABXC01001464.1/182038-182176 4558:Sorghum bicolor
(sorghum)
Length = 139
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 111 aggcaagtcatccttggctatc 132
||||||||||||||||||||||
Sbjct: 32 aggcaagtcatccttggctatc 11
>RF00645;MIR169_2;ABXC01001464.1/179202-179340 4558:Sorghum bicolor
(sorghum)
Length = 139
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 111 aggcaagtcatccttggctatcagag 136
|||||||||||||||||||| |||||
Sbjct: 35 aggcaagtcatccttggctaccagag 10
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 38 aggctagccaaggagactgcct 59
||||||||||||||||||||||
Sbjct: 127 aggctagccaaggagactgcct 106
>RF00645;MIR169_2;AY551243.1/20-180 4530:Oryza sativa (rice)
Length = 161
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 111 aggcaagtcatccttggctatc 132
||||||||||||||||||||||
Sbjct: 32 aggcaagtcatccttggctatc 11
