miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01996;mir-995;AASS01029797.1/1529-1618 7240:Drosophila simulans
Length = 90
Score = 172 bits (87), Expect = 7e-43
Identities = 87/87 (100%)
Strand = Plus / Plus
Query: 17 cacctgtaccccgcagcccgaattatgtgggagctgcgccgtttccaaagtccgtagcac 76
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cacctgtaccccgcagcccgaattatgtgggagctgcgccgtttccaaagtccgtagcac 60
Query: 77 cacatgattcggcttcgtggtgcagga 103
|||||||||||||||||||||||||||
Sbjct: 61 cacatgattcggcttcgtggtgcagga 87
>RF01996;mir-995;AAPP01019564.1/136354-136265 7217:Drosophila
ananassae
Length = 90
Score = 77.8 bits (39), Expect = 3e-14
Identities = 66/75 (88%)
Strand = Plus / Plus
Query: 28 cgcagcccgaattatgtgggagctgcgccgtttccaaagtccgtagcaccacatgattcg 87
||||||||| ||| |||||||||||||||||| |||||||||||||||||||||
Sbjct: 12 cgcagcccggattctgtgggagctgcgccgttctttctatccgtagcaccacatgattcg 71
Query: 88 gcttcgtggtgcagg 102
|||||||||||||||
Sbjct: 72 gcttcgtggtgcagg 86
>RF01996;mir-995;AANI01017183.1/395-306 7244:Drosophila virilis
Length = 90
Score = 63.9 bits (32), Expect = 4e-10
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 69 cgtagcaccacatgattcggcttcgtggtgca 100
||||||||||||||||||||||||||||||||
Sbjct: 52 cgtagcaccacatgattcggcttcgtggtgca 83
>RF01996;mir-995;AAPT01018750.1/3883-3988 7222:Drosophila
grimshawi
Length = 106
Score = 61.9 bits (31), Expect = 2e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 69 cgtagcaccacatgattcggcttcgtggtgc 99
|||||||||||||||||||||||||||||||
Sbjct: 68 cgtagcaccacatgattcggcttcgtggtgc 98
>RF01996;mir-995;AAIZ01006001.1/48783-48873 7234:Drosophila
persimilis
Length = 91
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 68 ccgtagcaccacatgattcggcttcgtggt 97
||||||||||||||||||||||| ||||||
Sbjct: 54 ccgtagcaccacatgattcggctgcgtggt 83
>RF01996;mir-995;AAQB01008976.1/639591-639498 7260:Drosophila
willistoni
Length = 94
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 69 cgtagcaccacatgattcggcttcgtggtg 98
|||||||||||||||||||||||| |||||
Sbjct: 57 cgtagcaccacatgattcggcttcatggtg 86
>RF01996;mir-995;AAPU01011147.1/810709-810797 7230:Drosophila
mojavensis
Length = 89
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 69 cgtagcaccacatgattcggctt 91
|||||||||||||||||||||||
Sbjct: 51 cgtagcaccacatgattcggctt 73
