miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00788;mir-287;AAPU01010664.1/17553-17645 7230:Drosophila
mojavensis
Length = 93
Score = 131 bits (66), Expect = 1e-30
Identities = 66/66 (100%)
Strand = Plus / Plus
Query: 3 gcataatgtttgaaattttgcacacatttacaataattgtaaatgtgttgaaaatcgttt 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22 gcataatgtttgaaattttgcacacatttacaataattgtaaatgtgttgaaaatcgttt 81
Query: 63 gcacaa 68
||||||
Sbjct: 82 gcacaa 87
Score = 46.1 bits (23), Expect = 5e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 24 acacatttacaataattgtaaatgtgt 50
||||||||||||| |||||||||||||
Sbjct: 69 acacatttacaattattgtaaatgtgt 43
>RF00788;mir-287;AAPP01015675.1/1283611-1283521 7217:Drosophila
ananassae
Length = 91
Score = 111 bits (56), Expect = 1e-24
Identities = 56/56 (100%)
Strand = Plus / Plus
Query: 13 tgaaattttgcacacatttacaataattgtaaatgtgttgaaaatcgtttgcacaa 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30 tgaaattttgcacacatttacaataattgtaaatgtgttgaaaatcgtttgcacaa 85
Score = 46.1 bits (23), Expect = 5e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 24 acacatttacaataattgtaaatgtgt 50
||||||||||||| |||||||||||||
Sbjct: 67 acacatttacaattattgtaaatgtgt 41
>RF00788;mir-287;AAFS01000718.1/2117-2027 46245:Drosophila
pseudoobscura pseudoobscura
Length = 91
Score = 107 bits (54), Expect = 2e-23
Identities = 54/54 (100%)
Strand = Plus / Plus
Query: 15 aaattttgcacacatttacaataattgtaaatgtgttgaaaatcgtttgcacaa 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32 aaattttgcacacatttacaataattgtaaatgtgttgaaaatcgtttgcacaa 85
Score = 46.1 bits (23), Expect = 5e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 24 acacatttacaataattgtaaatgtgt 50
||||||||||||| |||||||||||||
Sbjct: 67 acacatttacaattattgtaaatgtgt 41
>RF00788;mir-287;AAPQ01007040.1/1493379-1493287 7220:Drosophila
erecta
Length = 93
Score = 107 bits (54), Expect = 2e-23
Identities = 54/54 (100%)
Strand = Plus / Plus
Query: 13 tgaaattttgcacacatttacaataattgtaaatgtgttgaaaatcgtttgcac 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32 tgaaattttgcacacatttacaataattgtaaatgtgttgaaaatcgtttgcac 85
Score = 46.1 bits (23), Expect = 5e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 24 acacatttacaataattgtaaatgtgt 50
||||||||||||| |||||||||||||
Sbjct: 69 acacatttacaattattgtaaatgtgt 43
>RF00788;mir-287;AAGH01003987.1/3230-3289 7240:Drosophila simulans
Length = 60
Score = 105 bits (53), Expect = 7e-23
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 14 gaaattttgcacacatttacaataattgtaaatgtgttgaaaatcgtttgcac 66
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56 gaaattttgcacacatttacaataattgtaaatgtgttgaaaatcgtttgcac 4
Score = 46.1 bits (23), Expect = 5e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 24 acacatttacaataattgtaaatgtgt 50
||||||||||||| |||||||||||||
Sbjct: 20 acacatttacaattattgtaaatgtgt 46
>RF00788;mir-287;AAQB01006734.1/267050-266959 7260:Drosophila
willistoni
Length = 92
Score = 103 bits (52), Expect = 3e-22
Identities = 55/56 (98%)
Strand = Plus / Plus
Query: 13 tgaaattttgcacacatttacaataattgtaaatgtgttgaaaatcgtttgcacaa 68
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 30 tgaaattttgcacacatttacaattattgtaaatgtgttgaaaatcgtttgcacaa 85
Score = 54.0 bits (27), Expect = 2e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 24 acacatttacaataattgtaaatgtgt 50
|||||||||||||||||||||||||||
Sbjct: 67 acacatttacaataattgtaaatgtgt 41
>RF00788;mir-287;AAEU02000290.1/178244-178333 7245:Drosophila
yakuba
Length = 90
Score = 97.6 bits (49), Expect = 2e-20
Identities = 52/53 (98%)
Strand = Plus / Plus
Query: 13 tgaaattttgcacacatttacaataattgtaaatgtgttgaaaatcgtttgca 65
|||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 29 tgaaattttgcacacatttacagtaattgtaaatgtgttgaaaatcgtttgca 81
