miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00787;mir-288;AANI01016239.1/44496-44592 7244:Drosophila
virilis
Length = 97
Score = 192 bits (97), Expect = 6e-49
Identities = 97/97 (100%)
Strand = Plus / Plus
Query: 1 cagccgcgtcgtaattagctgtgcacaacgttgctggcgataattaatgactttggtcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cagccgcgtcgtaattagctgtgcacaacgttgctggcgataattaatgactttggtcac 60
Query: 61 gttggtttcatgtcgatttcatttcatgacacggccg 97
|||||||||||||||||||||||||||||||||||||
Sbjct: 61 gttggtttcatgtcgatttcatttcatgacacggccg 97
>RF00787;mir-288;AAQB01006401.1/336794-336697 7260:Drosophila
willistoni
Length = 98
Score = 117 bits (59), Expect = 3e-26
Identities = 84/91 (92%), Gaps = 1/91 (1%)
Strand = Plus / Plus
Query: 8 gtcgtaattagctgtgcacaacgttgct-ggcgataattaatgactttggtcacgttggt 66
|||||||||||| | ||||||| || | |||||||||||||||| ||||||||||||||
Sbjct: 8 gtcgtaattagcagcgcacaacattcgtcggcgataattaatgacgttggtcacgttggt 67
Query: 67 ttcatgtcgatttcatttcatgacacggccg 97
|||||||||||||||||||||||||||||||
Sbjct: 68 ttcatgtcgatttcatttcatgacacggccg 98
>RF00787;mir-288;AC093440.2/172834-172738 7227:Drosophila
melanogaster (fruit fly)
Length = 97
Score = 107 bits (54), Expect = 3e-23
Identities = 60/62 (96%)
Strand = Plus / Plus
Query: 36 ggcgataattaatgactttggtcacgttggtttcatgtcgatttcatttcatgacacggc 95
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36 ggcgataattaatgacggtggtcacgttggtttcatgtcgatttcatttcatgacacggc 95
Query: 96 cg 97
||
Sbjct: 96 cg 97
