miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00732;mir-305;AANI01016257.1/59422-59335 7244:Drosophila
virilis
Length = 88
Score = 145 bits (73), Expect = 8e-35
Identities = 73/73 (100%)
Strand = Plus / Plus
Query: 1 catgtctattgtacttcatcaggtgctctggtgtgacttgtaacccggcacatgttgaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8 catgtctattgtacttcatcaggtgctctggtgtgacttgtaacccggcacatgttgaag 67
Query: 61 tacactcaatatg 73
|||||||||||||
Sbjct: 68 tacactcaatatg 80
>RF00732;mir-305;AAPP01015737.1/35950-36037 7217:Drosophila
ananassae
Length = 88
Score = 105 bits (53), Expect = 7e-23
Identities = 68/73 (93%)
Strand = Plus / Plus
Query: 1 catgtctattgtacttcatcaggtgctctggtgtgacttgtaacccggcacatgttgaag 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 8 catgtctattgtacttcatcaggtgctctggtgtccaccgtaacccggcacatgttgaag 67
Query: 61 tacactcaatatg 73
|||||||||||||
Sbjct: 68 tacactcaatatg 80
>RF00732;mir-305;AAAB01008980.1/2241127-2241216 180454:Anopheles
gambiae str. PEST
Length = 90
Score = 71.9 bits (36), Expect = 1e-12
Identities = 63/70 (90%), Gaps = 4/70 (5%)
Strand = Plus / Plus
Query: 1 catgtctattgtacttcatcaggtgctctggtgtgacttg---taacccggcacatgttg 57
||||||||||||||||||||||||||||||||| || ||| ||||||||||||||||
Sbjct: 8 catgtctattgtacttcatcaggtgctctggtg-gatttgagaaaacccggcacatgttg 66
Query: 58 aagtacactc 67
|||||||||
Sbjct: 67 gagtacactc 76
>RF00732;mir-305;AAGE02001651.1/105678-105765 7159:Aedes aegypti
(yellow fever mosquito)
Length = 88
Score = 63.9 bits (32), Expect = 2e-10
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 1 catgtctattgtacttcatcaggtgctctggt 32
||||||||||||||||||||||||||||||||
Sbjct: 8 catgtctattgtacttcatcaggtgctctggt 39
>RF00732;mir-305;AAJJ01000649.1/41392-41476 7070:Tribolium
castaneum (red flour beetle)
Length = 85
Score = 63.9 bits (32), Expect = 2e-10
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 1 catgtctattgtacttcatcaggtgctctggt 32
||||||||||||||||||||||||||||||||
Sbjct: 8 catgtctattgtacttcatcaggtgctctggt 39
>RF00732;mir-305;BABH01005296.1/11892-11978 7091:Bombyx mori
(domestic silkworm)
Length = 87
Score = 52.0 bits (26), Expect = 9e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 8 attgtacttcatcaggtgctctggtg 33
||||||||||||||||||||||||||
Sbjct: 15 attgtacttcatcaggtgctctggtg 40
>RF00732;mir-305;AADG05001619.1/14219-14305 7460:Apis mellifera
(honey bee)
Length = 87
Score = 52.0 bits (26), Expect = 9e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 8 attgtacttcatcaggtgctctggtg 33
||||||||||||||||||||||||||
Sbjct: 15 attgtacttcatcaggtgctctggtg 40
>RF00732;mir-305;AAZO01007192.1/28953-29038 121224:Pediculus
humanus corporis (human body louse)
Length = 86
Score = 50.1 bits (25), Expect = 4e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 8 attgtacttcatcaggtgctctggt 32
|||||||||||||||||||||||||
Sbjct: 15 attgtacttcatcaggtgctctggt 39
>RF00732;mir-305;ABJB010539510.1/4555-4465 6945:Ixodes scapularis
(black-legged tick)
Length = 91
Score = 48.1 bits (24), Expect = 1e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 attgtacttcatcaggtgctctgg 31
||||||||||||||||||||||||
Sbjct: 15 attgtacttcatcaggtgctctgg 38
