miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00807;mir-314;AANI01017486.1/342740-342830 7244:Drosophila
virilis
Length = 91
Score = 180 bits (91), Expect = 2e-45
Identities = 91/91 (100%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttgaatgtacctggttgaggaacgaattcaacgtttggattttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcgtaacttgtgtggcttgaatgtacctggttgaggaacgaattcaacgtttggattttg 60
Query: 61 ttgcctttggtattcgagccaataagttcgg 91
|||||||||||||||||||||||||||||||
Sbjct: 61 ttgcctttggtattcgagccaataagttcgg 91
>RF00807;mir-314;AAPP01019289.1/431088-431175 7217:Drosophila
ananassae
Length = 88
Score = 91.7 bits (46), Expect = 1e-18
Identities = 83/92 (90%), Gaps = 5/92 (5%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggctt-gaatgtacctggttgaggaacgaattcaacgtttggatttt 59
|||||||||||||||||| |||||||||| ||||||||| || ||| |||||||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaa--aaatca--gtttggatttt 56
Query: 60 gttgcctttggtattcgagccaataagttcgg 91
||| ||| ||||||||||||||||||||||||
Sbjct: 57 gttacctctggtattcgagccaataagttcgg 88
>RF00807;mir-314;AAPU01011627.1/156896-156990 7230:Drosophila
mojavensis
Length = 95
Score = 67.9 bits (34), Expect = 2e-11
Identities = 84/96 (87%), Gaps = 6/96 (6%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggctt-gaatgtacctggttgag-gaa---cgaattcaacgtttgga 55
|||||||||||||||||| |||||||||| || ||| ||| |||||||| ||| |||
Sbjct: 1 tcgtaacttgtgtggcttcgaatgtacctcgtcgagcgaaaagcgaattcattgtt-gga 59
Query: 56 ttttgttgcctttggtattcgagccaataagttcgg 91
||||||||| |||||||||||||||||||||||||
Sbjct: 60 ttttgttgctcttggtattcgagccaataagttcgg 95
>RF00807;mir-314;AAFS01000446.1/64778-64866 46245:Drosophila
pseudoobscura pseudoobscura
Length = 89
Score = 63.9 bits (32), Expect = 3e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 52 tggattttgttgcctttggtattcgagccaataagttcgg 91
||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 50 tggattttgttacctctggtattcgagccaataagttcgg 89
>RF00807;mir-314;AAPT01020574.1/773332-773257 7222:Drosophila
grimshawi
Length = 76
Score = 46.1 bits (23), Expect = 8e-05
Identities = 30/31 (96%), Gaps = 1/31 (3%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggctt-gaatgtacctgg 30
|||||||||||||||||| ||||||||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaatgtacctgg 31
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 69 ggtattcgagccaataagttcgg 91
|||||||||||||||||||||||
Sbjct: 54 ggtattcgagccaataagttcgg 76
