miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00661;mir-31;AAQB01006276.1/72264-72183 7260:Drosophila
willistoni
Length = 82
Score = 163 bits (82), Expect = 5e-40
Identities = 82/82 (100%)
Strand = Plus / Plus
Query: 2 ctgtttttcgaattggcaagatgtcggcatagctgataatatttttagaaaagcgctatg 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctgtttttcgaattggcaagatgtcggcatagctgataatatttttagaaaagcgctatg 60
Query: 62 ctgcatctagtcagtttattca 83
||||||||||||||||||||||
Sbjct: 61 ctgcatctagtcagtttattca 82
>RF00661;mir-31;AAPU01010140.1/40129-40215 7230:Drosophila
mojavensis
Length = 87
Score = 54.0 bits (27), Expect = 3e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 11 gaattggcaagatgtcggcatagctga 37
|||||||||||||||||||||||||||
Sbjct: 10 gaattggcaagatgtcggcatagctga 36
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 53 agcgctatgctgcatctagtcagtt 77
|||||||||||||||||||||||||
Sbjct: 57 agcgctatgctgcatctagtcagtt 81
>RF00661;mir-31;AAPQ01007042.1/187291-187204 7220:Drosophila
erecta
Length = 88
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 12 aattggcaagatgtcggcatagctga 37
||||||||||||||||||||||||||
Sbjct: 11 aattggcaagatgtcggcatagctga 36
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 53 agcgctatgctgcatctagtcagtt 77
|||||||||||||||||||||||||
Sbjct: 58 agcgctatgctgcatctagtcagtt 82
>RF00661;mir-31;AAIZ01001980.1/15086-15173 7234:Drosophila
persimilis
Length = 88
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 12 aattggcaagatgtcggcatagctga 37
||||||||||||||||||||||||||
Sbjct: 11 aattggcaagatgtcggcatagctga 36
Score = 46.1 bits (23), Expect = 7e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 55 cgctatgctgcatctagtcagtt 77
|||||||||||||||||||||||
Sbjct: 60 cgctatgctgcatctagtcagtt 82
>RF00661;mir-31;AAGH01011800.1/12196-12109 7240:Drosophila
simulans
Length = 88
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 12 aattggcaagatgtcggcatagctga 37
||||||||||||||||||||||||||
Sbjct: 11 aattggcaagatgtcggcatagctga 36
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 53 agcgctatgctgcatctagtcagtt 77
|||||||||||||||||||||||||
Sbjct: 58 agcgctatgctgcatctagtcagtt 82
>RF00661;mir-31;AANI01014909.1/166793-166706 7244:Drosophila
virilis
Length = 88
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 12 aattggcaagatgtcggcatagctga 37
||||||||||||||||||||||||||
Sbjct: 11 aattggcaagatgtcggcatagctga 36
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 53 agcgctatgctgcatctagtcagtt 77
|||||||||||||||||||||||||
Sbjct: 58 agcgctatgctgcatctagtcagtt 82
>RF00661;mir-31;AAZX01004302.1/23296-23375 7425:Nasonia
vitripennis (jewel wasp)
Length = 80
Score = 46.1 bits (23), Expect = 7e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 ggcaagatgtcggcatagctgat 38
|||||||||||||||||||||||
Sbjct: 15 ggcaagatgtcggcatagctgat 37
>RF00661;mir-31;AADG05006757.1/17977-18057 7460:Apis mellifera
(honey bee)
Length = 81
Score = 46.1 bits (23), Expect = 7e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 ggcaagatgtcggcatagctgat 38
|||||||||||||||||||||||
Sbjct: 15 ggcaagatgtcggcatagctgat 37
>RF00661;mir-31;AAZO01004538.1/561-481 121224:Pediculus humanus
corporis (human body louse)
Length = 81
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 16 ggcaagatgtcggcatagctga 37
||||||||||||||||||||||
Sbjct: 15 ggcaagatgtcggcatagctga 36
>RF00661;mir-31;AAJJ01000269.1/62248-62171 7070:Tribolium
castaneum (red flour beetle)
Length = 78
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 16 ggcaagatgtcggcatagctga 37
||||||||||||||||||||||
Sbjct: 15 ggcaagatgtcggcatagctga 36
