miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00661;mir-31;AAQB01010380.1/1470-1604 7260:Drosophila willistoni
Length = 135
Score = 264 bits (133), Expect = 3e-70
Identities = 133/133 (100%)
Strand = Plus / Plus
Query: 1 actagtggatttggcaagatgtcggaatagctgaaagtcacacaaaatcataaaatgttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 actagtggatttggcaagatgtcggaatagctgaaagtcacacaaaatcataaaatgttt 62
Query: 61 gccgttttgttattgttgtgaattttattgatttcaaaaattacggctatgcctcatcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 gccgttttgttattgttgtgaattttattgatttcaaaaattacggctatgcctcatcta 122
Query: 121 gtcaattgcatta 133
|||||||||||||
Sbjct: 123 gtcaattgcatta 135
>RF00661;mir-31;AAPQ01005997.1/12172-12293 7220:Drosophila erecta
Length = 122
Score = 60.0 bits (30), Expect = 8e-09
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 104 cggctatgcctcatctagtcaattgcatta 133
||||||||||||||||||||||||||||||
Sbjct: 93 cggctatgcctcatctagtcaattgcatta 122
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 9 atttggcaagatgtcggaatagctga 34
||||||||||||||||||||||||||
Sbjct: 11 atttggcaagatgtcggaatagctga 36
>RF00661;mir-31;AAIZ01004624.1/839-930 7234:Drosophila persimilis
Length = 92
Score = 58.0 bits (29), Expect = 3e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 104 cggctatgcctcatctagtcaattgcatt 132
|||||||||||||||||||||||||||||
Sbjct: 63 cggctatgcctcatctagtcaattgcatt 91
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 9 atttggcaagatgtcggaatagctga 34
||||||||||||||||||||||||||
Sbjct: 11 atttggcaagatgtcggaatagctga 36
>RF00661;mir-31;AAPT01021280.1/172982-172862 7222:Drosophila
grimshawi
Length = 121
Score = 58.0 bits (29), Expect = 3e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 104 cggctatgcctcatctagtcaattgcatt 132
|||||||||||||||||||||||||||||
Sbjct: 92 cggctatgcctcatctagtcaattgcatt 120
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 9 atttggcaagatgtcggaatagctga 34
||||||||||||||||||||||||||
Sbjct: 11 atttggcaagatgtcggaatagctga 36
>RF00661;mir-31;AANI01013847.1/25203-25083 7244:Drosophila virilis
Length = 121
Score = 58.0 bits (29), Expect = 3e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 104 cggctatgcctcatctagtcaattgcatt 132
|||||||||||||||||||||||||||||
Sbjct: 92 cggctatgcctcatctagtcaattgcatt 120
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 9 atttggcaagatgtcggaatagctga 34
||||||||||||||||||||||||||
Sbjct: 11 atttggcaagatgtcggaatagctga 36
>RF00661;mir-31;AAPU01009413.1/121752-121873 7230:Drosophila
mojavensis
Length = 122
Score = 58.0 bits (29), Expect = 3e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 104 cggctatgcctcatctagtcaattgcatt 132
|||||||||||||||||||||||||||||
Sbjct: 93 cggctatgcctcatctagtcaattgcatt 121
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 9 atttggcaagatgtcggaatagctga 34
||||||||||||||||||||||||||
Sbjct: 11 atttggcaagatgtcggaatagctga 36
>RF00661;mir-31;AAPP01016551.1/245474-245363 7217:Drosophila
ananassae
Length = 112
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 9 atttggcaagatgtcggaatagctga 34
||||||||||||||||||||||||||
Sbjct: 11 atttggcaagatgtcggaatagctga 36
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 104 cggctatgcctcatctagtcaattgcatta 133
|||||||||||||||||||||||| |||||
Sbjct: 83 cggctatgcctcatctagtcaattacatta 112