miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00726;mir-87;AAQB01006452.1/3553-3454 7260:Drosophila
willistoni
Length = 100
Score = 176 bits (89), Expect = 3e-44
Identities = 92/93 (98%)
Strand = Plus / Plus
Query: 1 catatttcattcgcgcctgtatcttgctgaaccgttaccaattgtgatcttcatttccgg 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 2 catatttcattcgcgcctgtatcttgctgaaccgttaccaattgtgatcatcatttccgg 61
Query: 61 ttgagcaaaatttcaggtgtgtgagaaatttgt 93
|||||||||||||||||||||||||||||||||
Sbjct: 62 ttgagcaaaatttcaggtgtgtgagaaatttgt 94
>RF00726;mir-87;AAPU01010611.1/255409-255311 7230:Drosophila
mojavensis
Length = 99
Score = 113 bits (57), Expect = 4e-25
Identities = 82/89 (92%), Gaps = 1/89 (1%)
Strand = Plus / Plus
Query: 5 tttcattcgcgcctgtatcttgctgaaccgttaccaattgtgatcttcatttccggttga 64
|||||||||||||||||||||||||||||||||| |||||| | | || |||||||||
Sbjct: 6 tttcattcgcgcctgtatcttgctgaaccgttac-aattgtcacatccaaatccggttga 64
Query: 65 gcaaaatttcaggtgtgtgagaaatttgt 93
|||||||||||||||||||||||||||||
Sbjct: 65 gcaaaatttcaggtgtgtgagaaatttgt 93
>RF00726;mir-87;AADE01000150.1/47415-47513 46245:Drosophila
pseudoobscura pseudoobscura
Length = 99
Score = 97.6 bits (49), Expect = 2e-20
Identities = 83/93 (89%), Gaps = 1/93 (1%)
Strand = Plus / Plus
Query: 1 catatttcattcgcgcctgtatcttgctgaaccgttaccaattgtgatcttcatttccgg 60
||||||||||||||||||||||||||||||||||| ||| | || |||| | ||||
Sbjct: 2 catatttcattcgcgcctgtatcttgctgaaccgtagcca-taatggtctttcatcccgg 60
Query: 61 ttgagcaaaatttcaggtgtgtgagaaatttgt 93
|||||||||||||||||||||||||||||||||
Sbjct: 61 ttgagcaaaatttcaggtgtgtgagaaatttgt 93
>RF00726;mir-87;AAPP01015726.1/103266-103169 7217:Drosophila
ananassae
Length = 98
Score = 91.7 bits (46), Expect = 1e-18
Identities = 82/93 (88%), Gaps = 2/93 (2%)
Strand = Plus / Plus
Query: 1 catatttcattcgcgcctgtatcttgctgaaccgttaccaattgtgatcttcatttccgg 60
||||||||||||||||||||||||||||||||||||||| || | | | |||||
Sbjct: 2 catatttcattcgcgcctgtatcttgctgaaccgttaccgatatggcacagaa--tccgg 59
Query: 61 ttgagcaaaatttcaggtgtgtgagaaatttgt 93
|||||||||||||||||||||||||||||||||
Sbjct: 60 ttgagcaaaatttcaggtgtgtgagaaatttgt 92
>RF00726;mir-87;AASW01042897.1/1205-1302 7240:Drosophila simulans
Length = 98
Score = 67.9 bits (34), Expect = 2e-11
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 56 tccggttgagcaaaatttcaggtgtgtgagaaat 89
||||||||||||||||||||||||||||||||||
Sbjct: 55 tccggttgagcaaaatttcaggtgtgtgagaaat 88
