miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00464;mir-92;AAPU01011126.1/203266-203187 7230:Drosophila
mojavensis
Length = 80
Score = 115 bits (58), Expect = 9e-26
Identities = 67/70 (95%)
Strand = Plus / Plus
Query: 11 aggacgggaaggtgtcaacgttttgccttatgaatcaaacattgcacttgtcccggccta 70
|||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||
Sbjct: 11 aggacgggaaggtgtcaacgttttaccttttgattcaaacattgcacttgtcccggccta 70
Query: 71 tgagcggttt 80
||||||||||
Sbjct: 71 tgagcggttt 80
>RF00464;mir-92;AABU01002774.1/17891638-17891716 7227:Drosophila
melanogaster (fruit fly)
Length = 79
Score = 103 bits (52), Expect = 3e-22
Identities = 74/80 (92%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 1 aatttctcgtaggacgggaaggtgtcaacgttttgccttatgaatcaaacattgcacttg 60
|||||| ||||||||||||||||||||||||||||| || |||| ||||||||||||||
Sbjct: 1 aatttcccgtaggacgggaaggtgtcaacgttttgcatttcgaat-aaacattgcacttg 59
Query: 61 tcccggcctatgagcggttt 80
|||||||||||| |||||||
Sbjct: 60 tcccggcctatgggcggttt 79
>RF00464;mir-92;AASS01038642.1/1728-1802 7240:Drosophila simulans
Length = 75
Score = 56.0 bits (28), Expect = 7e-08
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 48 aacattgcacttgtcccggcctatgagcggtt 79
||||||||||||||||||||||||| ||||||
Sbjct: 43 aacattgcacttgtcccggcctatgggcggtt 74
>RF00464;mir-92;ABRQ01318667.1/1002-921 9813:Procavia capensis
(cape rock hyrax)
Length = 82
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 51 attgcacttgtcccggcctatg 72
||||||||||||||||||||||
Sbjct: 53 attgcacttgtcccggcctatg 74
>RF00464;mir-92;AAWU01030066.1/31253-31174 7176:Culex
quinquefasciatus (southern house mosquito)
Length = 80
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 51 attgcacttgtcccggcctatg 72
||||||||||||||||||||||
Sbjct: 51 attgcacttgtcccggcctatg 72
>RF00464;mir-92;AAGE02006821.1/67754-67834 7159:Aedes aegypti
(yellow fever mosquito)
Length = 81
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 51 attgcacttgtcccggcctatg 72
||||||||||||||||||||||
Sbjct: 52 attgcacttgtcccggcctatg 73
>RF00464;mir-92;AAAB01007923.1/22644-22568 180454:Anopheles
gambiae str. PEST
Length = 77
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 51 attgcacttgtcccggcctatg 72
||||||||||||||||||||||
Sbjct: 48 attgcacttgtcccggcctatg 69
