miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00706;mir-263;AAQB01006546.1/140884-140979 7260:Drosophila
willistoni
Length = 96
Score = 139 bits (70), Expect = 5e-33
Identities = 70/70 (100%)
Strand = Plus / Plus
Query: 1 atcttggcactgggagaattcacagttgattcttattcgatattctgtggttctgcgggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14 atcttggcactgggagaattcacagttgattcttattcgatattctgtggttctgcgggt 73
Query: 61 gccaaaatct 70
||||||||||
Sbjct: 74 gccaaaatct 83
>RF00706;mir-263;AAPP01019315.1/707685-707774 7217:Drosophila
ananassae
Length = 90
Score = 85.7 bits (43), Expect = 6e-17
Identities = 63/68 (92%), Gaps = 5/68 (7%)
Strand = Plus / Plus
Query: 1 atcttggcactgggagaattcacagttgattcttattcgatattctgtggttctgcgggt 60
||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 14 atcttggcactgggagaattcacagttgatt-ttat----tattctgtggttctgcgggt 68
Query: 61 gccaaaat 68
||||||||
Sbjct: 69 gccaaaat 76
>RF00706;mir-263;AAPQ01006581.1/272485-272396 7220:Drosophila
erecta
Length = 90
Score = 83.8 bits (42), Expect = 3e-16
Identities = 62/67 (92%), Gaps = 5/67 (7%)
Strand = Plus / Plus
Query: 2 tcttggcactgggagaattcacagttgattcttattcgatattctgtggttctgcgggtg 61
|||||||||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 15 tcttggcactgggagaattcacagttgatt-ttat----tattctgtggttctgcgggtg 69
Query: 62 ccaaaat 68
|||||||
Sbjct: 70 ccaaaat 76
>RF00706;mir-263;AAFS01001003.1/35414-35505 46245:Drosophila
pseudoobscura pseudoobscura
Length = 92
Score = 75.8 bits (38), Expect = 6e-14
Identities = 61/68 (89%), Gaps = 3/68 (4%)
Strand = Plus / Plus
Query: 2 tcttggcactgggagaattcacagttgattcttattcgatattctgtggttctgcgggtg 61
||||||||||||||||||||||||||| || || ||||||||||||||||||||||
Sbjct: 15 tcttggcactgggagaattcacagttggtttccat---atattctgtggttctgcgggtg 71
Query: 62 ccaaaatc 69
||||||||
Sbjct: 72 ccaaaatc 79
>RF00706;mir-263;AANI01017489.1/74722-74633 7244:Drosophila
virilis
Length = 90
Score = 71.9 bits (36), Expect = 1e-12
Identities = 62/69 (89%), Gaps = 5/69 (7%)
Strand = Plus / Plus
Query: 1 atcttggcactgggagaattcacagttgatt-cttattcgatattctgtggttctgcggg 59
|||||||||||||||||||||||||| |||| | || ||||||||||||||||||||
Sbjct: 13 atcttggcactgggagaattcacagtcgattacata----atattctgtggttctgcggg 68
Query: 60 tgccaaaat 68
|||||||||
Sbjct: 69 tgccaaaat 77
>RF00706;mir-263;AAKO01000155.1/113509-113420 7238:Drosophila
sechellia
Length = 90
Score = 65.9 bits (33), Expect = 6e-11
Identities = 59/66 (89%), Gaps = 5/66 (7%)
Strand = Plus / Plus
Query: 2 tcttggcactgggagaattcacagttgattcttattcgatattctgtggttctgcgggtg 61
|||||||||||||||||||||||||||| | | || |||||||||||||||||||||
Sbjct: 15 tcttggcactgggagaattcacagttgact-tgat----tattctgtggttctgcgggtg 69
Query: 62 ccaaaa 67
||||||
Sbjct: 70 ccaaaa 75
>RF00706;mir-263;ABKP02026803.1/39465-39371 377271:Anopheles
gambiae M
Length = 95
Score = 48.1 bits (24), Expect = 1e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 3 cttggcactgggagaattcacagt 26
||||||||||||||||||||||||
Sbjct: 16 cttggcactgggagaattcacagt 39
>RF00706;mir-263;AADK01025663.1/3361-3450 7091:Bombyx mori
(domestic silkworm)
Length = 90
Score = 46.1 bits (23), Expect = 6e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 3 cttggcactgggagaattcacag 25
|||||||||||||||||||||||
Sbjct: 16 cttggcactgggagaattcacag 38
>RF00706;mir-263;AAGE02001908.1/33266-33358 7159:Aedes aegypti
(yellow fever mosquito)
Length = 93
Score = 46.1 bits (23), Expect = 6e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 3 cttggcactgggagaattcacag 25
|||||||||||||||||||||||
Sbjct: 16 cttggcactgggagaattcacag 38
>RF00706;mir-263;ABLF01012668.1/9002-8913 7029:Acyrthosiphon pisum
(pea aphid)
Length = 90
Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 atcttggcactgggagaattcacag 25
||||||||||||| |||||||||||
Sbjct: 14 atcttggcactggaagaattcacag 38
