miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00822;mir-274;AAQB01007682.1/34817-34703 7260:Drosophila
willistoni
Length = 115
Score = 208 bits (105), Expect = 1e-53
Identities = 105/105 (100%)
Strand = Plus / Plus
Query: 1 gttgcagtttcattttgtgaccgacactaacgggtagtaacgggttaacaaagtcgtttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7 gttgcagtttcattttgtgaccgacactaacgggtagtaacgggttaacaaagtcgtttt 66
Query: 61 tctggccttttactcgtttttgcgatcacaaattctgaaattgca 105
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 tctggccttttactcgtttttgcgatcacaaattctgaaattgca 111
>RF00822;mir-274;AANI01017486.1/215294-215400 7244:Drosophila
virilis
Length = 107
Score = 75.8 bits (38), Expect = 1e-13
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 68 ttttactcgtttttgcgatcacaaattctgaaattgca 105
||||||||||||||||||||||||||||||||||||||
Sbjct: 66 ttttactcgtttttgcgatcacaaattctgaaattgca 103
Score = 60.0 bits (30), Expect = 6e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 1 gttgcagtttcattttgtgaccgacactaacgggtagt 38
||||||||||| |||||||||||||||||||||||||
Sbjct: 7 gttgcagtttcggtttgtgaccgacactaacgggtagt 44
>RF00822;mir-274;AAPT01020611.1/127253-127143 7222:Drosophila
grimshawi
Length = 111
Score = 71.9 bits (36), Expect = 2e-12
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 70 ttactcgtttttgcgatcacaaattctgaaattgca 105
||||||||||||||||||||||||||||||||||||
Sbjct: 72 ttactcgtttttgcgatcacaaattctgaaattgca 107
Score = 60.0 bits (30), Expect = 6e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 1 gttgcagtttcattttgtgaccgacactaacgggtagt 38
||||||||||| |||||||||||||||||||||||||
Sbjct: 7 gttgcagtttcggtttgtgaccgacactaacgggtagt 44
>RF00822;mir-274;AAPU01011627.1/22605-22713 7230:Drosophila
mojavensis
Length = 109
Score = 69.9 bits (35), Expect = 6e-12
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 71 tactcgtttttgcgatcacaaattctgaaattgca 105
|||||||||||||||||||||||||||||||||||
Sbjct: 71 tactcgtttttgcgatcacaaattctgaaattgca 105
Score = 60.0 bits (30), Expect = 6e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 1 gttgcagtttcattttgtgaccgacactaacgggtagt 38
||||||||||| |||||||||||||||||||||||||
Sbjct: 7 gttgcagtttcggtttgtgaccgacactaacgggtagt 44
>RF00822;mir-274;AADE01002814.1/8876-8780 46245:Drosophila
pseudoobscura pseudoobscura
Length = 97
Score = 67.9 bits (34), Expect = 2e-11
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 3 tgcagtttcattttgtgaccgacactaacgggta 36
||||||||||||||||||||||||||||||||||
Sbjct: 9 tgcagtttcattttgtgaccgacactaacgggta 42
Score = 46.1 bits (23), Expect = 9e-05
Identities = 33/35 (94%), Gaps = 1/35 (2%)
Strand = Plus / Plus
Query: 71 tactcgtttttgcgatcacaaattctgaaattgca 105
||||||||||||||||||| ||| |||||||||||
Sbjct: 60 tactcgtttttgcgatcac-aatactgaaattgca 93
>RF00822;mir-274;AAPP01019289.1/330187-330287 7217:Drosophila
ananassae
Length = 101
Score = 63.9 bits (32), Expect = 4e-10
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 1 gttgcagtttcattttgtgaccgacactaacgggta 36
||||||||||| ||||||||||||||||||||||||
Sbjct: 7 gttgcagtttcgttttgtgaccgacactaacgggta 42
Score = 63.9 bits (32), Expect = 4e-10
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 70 ttactcgtttttgcgatcacaaattctgaaattgca 105
|||||||||||||||||||||||| |||||||||||
Sbjct: 62 ttactcgtttttgcgatcacaaatcctgaaattgca 97
>RF00822;mir-274;AAKO01000079.1/37948-38047 7238:Drosophila
sechellia
Length = 100
Score = 63.9 bits (32), Expect = 4e-10
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 1 gttgcagtttcattttgtgaccgacactaacgggta 36
||||||||||| ||||||||||||||||||||||||
Sbjct: 7 gttgcagtttcgttttgtgaccgacactaacgggta 42
Score = 56.0 bits (28), Expect = 9e-08
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 70 ttactcgtttttgcgatcacaaattctgaaattgca 105
|||||||||||||||||||||||| ||||||||||
Sbjct: 61 ttactcgtttttgcgatcacaaatcatgaaattgca 96
