miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00788;mir-287;AAQB01006734.1/267050-266959 7260:Drosophila
willistoni
Length = 92
Score = 145 bits (73), Expect = 8e-35
Identities = 73/73 (100%)
Strand = Plus / Plus
Query: 1 tattgctgtaaagtctgaaattttgcacacatttacaattattgtaaatgtgttgaaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15 tattgctgtaaagtctgaaattttgcacacatttacaattattgtaaatgtgttgaaaat 74
Query: 61 cgtttgcacaaac 73
|||||||||||||
Sbjct: 75 cgtttgcacaaac 87
Score = 46.1 bits (23), Expect = 6e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 27 acacatttacaattattgtaaatgtgt 53
||||||||||||| |||||||||||||
Sbjct: 67 acacatttacaataattgtaaatgtgt 41
>RF00788;mir-287;AAPP01015675.1/1283611-1283521 7217:Drosophila
ananassae
Length = 91
Score = 109 bits (55), Expect = 5e-24
Identities = 58/59 (98%)
Strand = Plus / Plus
Query: 13 gtctgaaattttgcacacatttacaattattgtaaatgtgttgaaaatcgtttgcacaa 71
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 27 gtctgaaattttgcacacatttacaataattgtaaatgtgttgaaaatcgtttgcacaa 85
Score = 54.0 bits (27), Expect = 2e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 27 acacatttacaattattgtaaatgtgt 53
|||||||||||||||||||||||||||
Sbjct: 67 acacatttacaattattgtaaatgtgt 41
>RF00788;mir-287;AAPQ01007040.1/1493379-1493287 7220:Drosophila
erecta
Length = 93
Score = 103 bits (52), Expect = 3e-22
Identities = 55/56 (98%)
Strand = Plus / Plus
Query: 14 tctgaaattttgcacacatttacaattattgtaaatgtgttgaaaatcgtttgcac 69
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 30 tctgaaattttgcacacatttacaataattgtaaatgtgttgaaaatcgtttgcac 85
Score = 54.0 bits (27), Expect = 2e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 27 acacatttacaattattgtaaatgtgt 53
|||||||||||||||||||||||||||
Sbjct: 69 acacatttacaattattgtaaatgtgt 43
>RF00788;mir-287;AAPU01010664.1/17553-17645 7230:Drosophila
mojavensis
Length = 93
Score = 103 bits (52), Expect = 3e-22
Identities = 55/56 (98%)
Strand = Plus / Plus
Query: 16 tgaaattttgcacacatttacaattattgtaaatgtgttgaaaatcgtttgcacaa 71
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 32 tgaaattttgcacacatttacaataattgtaaatgtgttgaaaatcgtttgcacaa 87
Score = 54.0 bits (27), Expect = 2e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 27 acacatttacaattattgtaaatgtgt 53
|||||||||||||||||||||||||||
Sbjct: 69 acacatttacaattattgtaaatgtgt 43
>RF00788;mir-287;AAFS01000718.1/2117-2027 46245:Drosophila
pseudoobscura pseudoobscura
Length = 91
Score = 99.6 bits (50), Expect = 5e-21
Identities = 53/54 (98%)
Strand = Plus / Plus
Query: 18 aaattttgcacacatttacaattattgtaaatgtgttgaaaatcgtttgcacaa 71
|||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 32 aaattttgcacacatttacaataattgtaaatgtgttgaaaatcgtttgcacaa 85
Score = 54.0 bits (27), Expect = 2e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 27 acacatttacaattattgtaaatgtgt 53
|||||||||||||||||||||||||||
Sbjct: 67 acacatttacaattattgtaaatgtgt 41
>RF00788;mir-287;AAGH01003987.1/3230-3289 7240:Drosophila simulans
Length = 60
Score = 97.6 bits (49), Expect = 2e-20
Identities = 52/53 (98%)
Strand = Plus / Minus
Query: 17 gaaattttgcacacatttacaattattgtaaatgtgttgaaaatcgtttgcac 69
||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 56 gaaattttgcacacatttacaataattgtaaatgtgttgaaaatcgtttgcac 4
Score = 54.0 bits (27), Expect = 2e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 27 acacatttacaattattgtaaatgtgt 53
|||||||||||||||||||||||||||
Sbjct: 20 acacatttacaattattgtaaatgtgt 46
>RF00788;mir-287;AAEU02000290.1/178244-178333 7245:Drosophila
yakuba
Length = 90
Score = 95.6 bits (48), Expect = 7e-20
Identities = 54/56 (96%)
Strand = Plus / Plus
Query: 13 gtctgaaattttgcacacatttacaattattgtaaatgtgttgaaaatcgtttgca 68
||||||||||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 26 gtctgaaattttgcacacatttacagtaattgtaaatgtgttgaaaatcgtttgca 81
Score = 46.1 bits (23), Expect = 6e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 27 acacatttacaattattgtaaatgtgt 53
||||||||||||||| |||||||||||
Sbjct: 66 acacatttacaattactgtaaatgtgt 40