miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00787;mir-288;AAQB01006401.1/336794-336697 7260:Drosophila
willistoni
Length = 98
Score = 186 bits (94), Expect = 3e-47
Identities = 94/94 (100%)
Strand = Plus / Plus
Query: 1 caggtcgtaattagcagcgcacaacattcgtcggcgataattaatgacgttggtcacgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 caggtcgtaattagcagcgcacaacattcgtcggcgataattaatgacgttggtcacgtt 64
Query: 61 ggtttcatgtcgatttcatttcatgacacggccg 94
||||||||||||||||||||||||||||||||||
Sbjct: 65 ggtttcatgtcgatttcatttcatgacacggccg 98
>RF00787;mir-288;AC093440.2/172834-172738 7227:Drosophila
melanogaster (fruit fly)
Length = 97
Score = 117 bits (59), Expect = 3e-26
Identities = 62/63 (98%)
Strand = Plus / Plus
Query: 32 cggcgataattaatgacgttggtcacgttggtttcatgtcgatttcatttcatgacacgg 91
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 35 cggcgataattaatgacggtggtcacgttggtttcatgtcgatttcatttcatgacacgg 94
Query: 92 ccg 94
|||
Sbjct: 95 ccg 97
>RF00787;mir-288;AANI01016239.1/44496-44592 7244:Drosophila
virilis
Length = 97
Score = 117 bits (59), Expect = 3e-26
Identities = 84/91 (92%), Gaps = 1/91 (1%)
Strand = Plus / Plus
Query: 4 gtcgtaattagcagcgcacaacattcgtcggcgataattaatgacgttggtcacgttggt 63
|||||||||||| | ||||||| || | |||||||||||||||| ||||||||||||||
Sbjct: 8 gtcgtaattagctgtgcacaacgttgct-ggcgataattaatgactttggtcacgttggt 66
Query: 64 ttcatgtcgatttcatttcatgacacggccg 94
|||||||||||||||||||||||||||||||
Sbjct: 67 ttcatgtcgatttcatttcatgacacggccg 97
