miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00047;mir-2;AAPP01019563.1/2003-1932 7217:Drosophila ananassae
Length = 72
Score = 109 bits (55), Expect = 7e-24
Identities = 70/74 (94%), Gaps = 2/74 (2%)
Strand = Plus / Plus
Query: 16 aatgtcatcaaaaagggctgaagaaagatatttctgcatttgaatcgtatcacagccagc 75
|||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||
Sbjct: 1 aatgtcatcaaaaagggctgaaga--gatatttctgcatttgaagtgtatcacagccagc 58
Query: 76 tttgatgggcattg 89
||||||||||||||
Sbjct: 59 tttgatgggcattg 72
>RF00047;mir-2;AANI01017189.1/97953-98025 7244:Drosophila virilis
Length = 73
Score = 107 bits (54), Expect = 3e-23
Identities = 70/74 (94%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 16 aatgtcatcaaaaagggctgaagaaagatatttctgcatttgaatcgtatcacagccagc 75
||||||||||||||||||||| ||| ||||| |||||| |||||||||||||||||||||
Sbjct: 1 aatgtcatcaaaaagggctga-gaatgatatatctgcaattgaatcgtatcacagccagc 59
Query: 76 tttgatgggcattg 89
||||||||||||||
Sbjct: 60 tttgatgggcattg 73
>RF00047;mir-2;AADG05000005.1/26814-26880 7460:Apis mellifera
(honey bee)
Length = 67
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 60 tcgtatcacagccagctttgatg 82
|||||||||||||||||||||||
Sbjct: 38 tcgtatcacagccagctttgatg 60
