miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00752;mir-14;AAPU01010044.1/154796-154858 7230:Drosophila
          mojavensis
          Length = 63

 Score =  101 bits (51), Expect = 9e-22
 Identities = 60/63 (95%)
 Strand = Plus / Plus

                                                                      
Query: 1  tgtgggagcgagacggggactcactgtgcttattaaatagtcagtctttttctctctcct 60
          |||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||
Sbjct: 1  tgtgggagcgagacggggactcactgtgatttttatatagtcagtctttttctctctcct 60

             
Query: 61 ata 63
          |||
Sbjct: 61 ata 63




>RF00752;mir-14;ABKQ02021708.1/8469-8536 377270:Anopheles gambiae
          S
          Length = 68

 Score = 50.1 bits (25), Expect = 3e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 38 tagtcagtctttttctctctcctat 62
          |||||||||||||||||||||||||
Sbjct: 43 tagtcagtctttttctctctcctat 67




>RF00752;mir-14;AAWU01029067.1/5309-5242 7176:Culex
          quinquefasciatus (southern house mosquito)
          Length = 68

 Score = 48.1 bits (24), Expect = 1e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 39 agtcagtctttttctctctcctat 62
          ||||||||||||||||||||||||
Sbjct: 44 agtcagtctttttctctctcctat 67




>RF00752;mir-14;AAGE02012112.1/774-706 7159:Aedes aegypti (yellow
          fever mosquito)
          Length = 69

 Score = 48.1 bits (24), Expect = 1e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 39 agtcagtctttttctctctcctat 62
          ||||||||||||||||||||||||
Sbjct: 45 agtcagtctttttctctctcctat 68