miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00661;mir-31;AAPQ01005997.1/12172-12293 7220:Drosophila erecta
Length = 122
Score = 218 bits (110), Expect = 1e-56
Identities = 119/122 (97%)
Strand = Plus / Plus
Query: 1 caaataatgaatttggcaagatgtcggaatagctgagagcacagcggatcgagcctttga 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 1 caaataatgaatttggcaagatgtcggaatagctgagagcacagcggatcgagcctctta 60
Query: 61 tcgtccgaaaaaatgtgaatattttttaaaagcggctatgcctcatctagtcaattgcat 120
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 61 tcgtccgaaaaaatgtgaatatttttgaaaagcggctatgcctcatctagtcaattgcat 120
Query: 121 ta 122
||
Sbjct: 121 ta 122
>RF00661;mir-31;AAPP01016551.1/245474-245363 7217:Drosophila
ananassae
Length = 112
Score = 99.6 bits (50), Expect = 9e-21
Identities = 53/54 (98%)
Strand = Plus / Plus
Query: 1 caaataatgaatttggcaagatgtcggaatagctgagagcacagcggatcgagc 54
|||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1 caaataatgaatttggcaagatgtcggaatagctgagagcacagaggatcgagc 54
>RF00661;mir-31;AANI01013847.1/25203-25083 7244:Drosophila virilis
Length = 121
Score = 85.7 bits (43), Expect = 1e-16
Identities = 43/43 (100%)
Strand = Plus / Plus
Query: 1 caaataatgaatttggcaagatgtcggaatagctgagagcaca 43
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caaataatgaatttggcaagatgtcggaatagctgagagcaca 43
Score = 61.9 bits (31), Expect = 2e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 91 agcggctatgcctcatctagtcaattgcatt 121
|||||||||||||||||||||||||||||||
Sbjct: 90 agcggctatgcctcatctagtcaattgcatt 120
>RF00661;mir-31;AAPU01009413.1/121752-121873 7230:Drosophila
mojavensis
Length = 122
Score = 85.7 bits (43), Expect = 1e-16
Identities = 43/43 (100%)
Strand = Plus / Plus
Query: 1 caaataatgaatttggcaagatgtcggaatagctgagagcaca 43
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caaataatgaatttggcaagatgtcggaatagctgagagcaca 43
Score = 61.9 bits (31), Expect = 2e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 91 agcggctatgcctcatctagtcaattgcatt 121
|||||||||||||||||||||||||||||||
Sbjct: 91 agcggctatgcctcatctagtcaattgcatt 121
>RF00661;mir-31;AAIZ01004624.1/839-930 7234:Drosophila persimilis
Length = 92
Score = 81.8 bits (41), Expect = 2e-15
Identities = 41/41 (100%)
Strand = Plus / Plus
Query: 1 caaataatgaatttggcaagatgtcggaatagctgagagca 41
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caaataatgaatttggcaagatgtcggaatagctgagagca 41
Score = 60.0 bits (30), Expect = 7e-09
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 92 gcggctatgcctcatctagtcaattgcatt 121
||||||||||||||||||||||||||||||
Sbjct: 62 gcggctatgcctcatctagtcaattgcatt 91
>RF00661;mir-31;AAPT01021280.1/172982-172862 7222:Drosophila
grimshawi
Length = 121
Score = 77.8 bits (39), Expect = 3e-14
Identities = 42/43 (97%)
Strand = Plus / Plus
Query: 1 caaataatgaatttggcaagatgtcggaatagctgagagcaca 43
|||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1 caaataatgaatttggcaagatgtcggaatagctgacagcaca 43
Score = 61.9 bits (31), Expect = 2e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 91 agcggctatgcctcatctagtcaattgcatt 121
|||||||||||||||||||||||||||||||
Sbjct: 90 agcggctatgcctcatctagtcaattgcatt 120
>RF00661;mir-31;AAQB01010380.1/1470-1604 7260:Drosophila willistoni
Length = 135
Score = 60.0 bits (30), Expect = 7e-09
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 93 cggctatgcctcatctagtcaattgcatta 122
||||||||||||||||||||||||||||||
Sbjct: 106 cggctatgcctcatctagtcaattgcatta 135
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 11 atttggcaagatgtcggaatagctga 36
||||||||||||||||||||||||||
Sbjct: 11 atttggcaagatgtcggaatagctga 36
