miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00724;mir-282;AE014296.4/3251022-3251116 7227:Drosophila
melanogaster (fruit fly)
Length = 95
Score = 159 bits (80), Expect = 7e-39
Identities = 86/88 (97%)
Strand = Plus / Plus
Query: 1 ttccttataaatctagcctctactaggctttgtctgtgcatacgaaagccgatcagacat 60
|||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 4 ttccttctaaatctagcctctactaggctttgtctgtgcattcgaaagccgatcagacat 63
Query: 61 agcctataagaggttaggtgtaccaagg 88
||||||||||||||||||||||||||||
Sbjct: 64 agcctataagaggttaggtgtaccaagg 91
>RF00724;mir-282;AAPU01011488.1/130621-130527 7230:Drosophila
mojavensis
Length = 95
Score = 111 bits (56), Expect = 2e-24
Identities = 80/88 (90%)
Strand = Plus / Plus
Query: 1 ttccttataaatctagcctctactaggctttgtctgtgcatacgaaagccgatcagacat 60
||||||||||||||||||||||||||||||||||||||||| || | ||||||||||
Sbjct: 4 ttccttataaatctagcctctactaggctttgtctgtgcatttgatataagatcagacat 63
Query: 61 agcctataagaggttaggtgtaccaagg 88
||||||| |||||||||||||| |||||
Sbjct: 64 agcctatgagaggttaggtgtagcaagg 91
>RF00724;mir-282;AAQB01009652.1/11236-11325 7260:Drosophila
willistoni
Length = 90
Score = 93.7 bits (47), Expect = 4e-19
Identities = 77/87 (88%), Gaps = 5/87 (5%)
Strand = Plus / Plus
Query: 2 tccttataaatctagcctctactaggctttgtctgtgcatacgaaagccgatcagacata 61
|||||||||||||||||||||||||||||||||||||||| | | |||||||||
Sbjct: 5 tccttataaatctagcctctactaggctttgtctgtgcatttgga-----ttcagacata 59
Query: 62 gcctataagaggttaggtgtaccaagg 88
|||||| ||||||||||||||||||||
Sbjct: 60 gcctatgagaggttaggtgtaccaagg 86
>RF00724;mir-282;AAPT01020493.1/70677-70773 7222:Drosophila
grimshawi
Length = 97
Score = 83.8 bits (42), Expect = 3e-16
Identities = 75/85 (88%), Gaps = 2/85 (2%)
Strand = Plus / Plus
Query: 1 ttccttataaatctagcctctactaggctttgtctgtgca--tacgaaagccgatcagac 58
|||||||||||||||||||||||||||||||||||||||| | || | |||||||
Sbjct: 4 ttccttataaatctagcctctactaggctttgtctgtgcactttttcaattcaatcagac 63
Query: 59 atagcctataagaggttaggtgtac 83
||||||||| |||||||||||||||
Sbjct: 64 atagcctatgagaggttaggtgtac 88
>RF00724;mir-282;AAGE02015805.1/19430-19533 7159:Aedes aegypti
(yellow fever mosquito)
Length = 104
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 10 aatctagcctctactaggctttgtctgt 37
|||||||||||| |||||||||||||||
Sbjct: 13 aatctagcctctcctaggctttgtctgt 40
>RF00724;mir-282;ABKP02026817.1/6213-6306 377271:Anopheles gambiae
M
Length = 94
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 10 aatctagcctctactaggctttgtctgt 37
|||||||||||| |||||||||||||||
Sbjct: 13 aatctagcctcttctaggctttgtctgt 40
