miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00788;mir-287;AAEU02000290.1/178244-178333 7245:Drosophila
yakuba
Length = 90
Score = 153 bits (77), Expect = 4e-37
Identities = 77/77 (100%)
Strand = Plus / Plus
Query: 1 gtatgggtgtgggtctgaaattttgcacacatttacagtaattgtaaatgtgttgaaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14 gtatgggtgtgggtctgaaattttgcacacatttacagtaattgtaaatgtgttgaaaat 73
Query: 61 cgtttgcatgactgtga 77
|||||||||||||||||
Sbjct: 74 cgtttgcatgactgtga 90
>RF00788;mir-287;AAPP01015675.1/1283611-1283521 7217:Drosophila
ananassae
Length = 91
Score = 113 bits (57), Expect = 3e-25
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 9 gtgggtctgaaattttgcacacatttacagtaattgtaaatgtgttgaaaatcgtttgca 68
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 23 gtgggtctgaaattttgcacacatttacaataattgtaaatgtgttgaaaatcgtttgca 82
Query: 69 tgactgtga 77
|||||||
Sbjct: 83 caactgtga 91
>RF00788;mir-287;AAPQ01007040.1/1493379-1493287 7220:Drosophila
erecta
Length = 93
Score = 105 bits (53), Expect = 8e-23
Identities = 59/61 (96%)
Strand = Plus / Plus
Query: 14 tctgaaattttgcacacatttacagtaattgtaaatgtgttgaaaatcgtttgcatgact 73
|||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||
Sbjct: 30 tctgaaattttgcacacatttacaataattgtaaatgtgttgaaaatcgtttgcacgact 89
Query: 74 g 74
|
Sbjct: 90 g 90
>RF00788;mir-287;AAPU01010664.1/17553-17645 7230:Drosophila
mojavensis
Length = 93
Score = 99.6 bits (50), Expect = 5e-21
Identities = 59/62 (95%)
Strand = Plus / Plus
Query: 16 tgaaattttgcacacatttacagtaattgtaaatgtgttgaaaatcgtttgcatgactgt 75
|||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 32 tgaaattttgcacacatttacaataattgtaaatgtgttgaaaatcgtttgcacaactgt 91
Query: 76 ga 77
||
Sbjct: 92 ga 93
>RF00788;mir-287;AAFS01000718.1/2117-2027 46245:Drosophila
pseudoobscura pseudoobscura
Length = 91
Score = 95.6 bits (48), Expect = 8e-20
Identities = 57/60 (95%)
Strand = Plus / Plus
Query: 18 aaattttgcacacatttacagtaattgtaaatgtgttgaaaatcgtttgcatgactgtga 77
|||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||
Sbjct: 32 aaattttgcacacatttacaataattgtaaatgtgttgaaaatcgtttgcacaactgtga 91
>RF00788;mir-287;AAQB01006734.1/267050-266959 7260:Drosophila
willistoni
Length = 92
Score = 95.6 bits (48), Expect = 8e-20
Identities = 54/56 (96%)
Strand = Plus / Plus
Query: 13 gtctgaaattttgcacacatttacagtaattgtaaatgtgttgaaaatcgtttgca 68
||||||||||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 27 gtctgaaattttgcacacatttacaattattgtaaatgtgttgaaaatcgtttgca 82
Score = 46.1 bits (23), Expect = 6e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 27 acacatttacagtaattgtaaatgtgt 53
||||||||||| |||||||||||||||
Sbjct: 67 acacatttacaataattgtaaatgtgt 41
>RF00788;mir-287;AAGH01003987.1/3230-3289 7240:Drosophila simulans
Length = 60
Score = 95.6 bits (48), Expect = 8e-20
Identities = 51/52 (98%)
Strand = Plus / Minus
Query: 17 gaaattttgcacacatttacagtaattgtaaatgtgttgaaaatcgtttgca 68
||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 56 gaaattttgcacacatttacaataattgtaaatgtgttgaaaatcgtttgca 5
