miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00786;mir-289;AAEU02000202.1/398546-398448 7245:Drosophila
yakuba
Length = 99
Score = 190 bits (96), Expect = 2e-48
Identities = 96/96 (100%)
Strand = Plus / Plus
Query: 1 agtttacagtaaaataaatatttaagtggagcctgcgactccagtccctctgactgactg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 agtttacagtaaaataaatatttaagtggagcctgcgactccagtccctctgactgactg 61
Query: 61 gggtaagtctctcgagcgtttgttggcacgtaaaag 96
||||||||||||||||||||||||||||||||||||
Sbjct: 62 gggtaagtctctcgagcgtttgttggcacgtaaaag 97
>RF00786;mir-289;AASU01020046.1/1545-1606 7240:Drosophila simulans
Length = 62
Score = 81.8 bits (41), Expect = 1e-15
Identities = 47/49 (95%)
Strand = Plus / Plus
Query: 18 atatttaagtggagcctgcgactccagtccctctgactgactggggtaa 66
||||||||||||||||||||||||| ||||||| |||||||||||||||
Sbjct: 1 atatttaagtggagcctgcgactccggtccctcagactgactggggtaa 49
>RF00786;mir-289;AAIZ01008625.1/677-776 7234:Drosophila persimilis
Length = 100
Score = 73.8 bits (37), Expect = 4e-13
Identities = 83/97 (85%), Gaps = 1/97 (1%)
Strand = Plus / Plus
Query: 1 agtttacagtaaaataaatatttaagtggagcctgcgact-ccagtccctctgactgact 59
|||||||||| ||||||||||||||||||||||||||||| | ||| || | ||||
Sbjct: 2 agtttacagtgaaataaatatttaagtggagcctgcgactgggactccagctctccgact 61
Query: 60 ggggtaagtctctcgagcgtttgttggcacgtaaaag 96
||| ||| || || |||||||||||||||||||||||
Sbjct: 62 gggctaactcacttgagcgtttgttggcacgtaaaag 98
>RF00786;mir-289;AANI01017445.1/15868-15797 7244:Drosophila
virilis
Length = 72
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 1 agtttacagtaaaataaatatttaagtgg 29
|||||||||||||||||||||| ||||||
Sbjct: 2 agtttacagtaaaataaatattgaagtgg 30
