miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00730;mir-277;AAZX01003771.1/6490-6590 7425:Nasonia vitripennis
(jewel wasp)
Length = 101
Score = 168 bits (85), Expect = 7e-42
Identities = 85/85 (100%)
Strand = Plus / Plus
Query: 1 ggcaggctggggctcgtgccagatgcgcgtttacacgagagccctgaatactgtaaatgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 ggcaggctggggctcgtgccagatgcgcgtttacacgagagccctgaatactgtaaatgc 65
Query: 61 actatctggtacgacatctctcctg 85
|||||||||||||||||||||||||
Sbjct: 66 actatctggtacgacatctctcctg 90
>RF00730;mir-277;AADG05001988.1/82689-82784 7460:Apis mellifera
(honey bee)
Length = 96
Score = 125 bits (63), Expect = 1e-28
Identities = 75/78 (96%), Gaps = 2/78 (2%)
Strand = Plus / Plus
Query: 8 tggggctcgtgccagatgcgcgtttacacgagagccctgaatactgtaaatgcactatct 67
|||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 11 tggggctcgtgccagatgcgcgtttacacggg--ccctgaatactgtaaatgcactatct 68
Query: 68 ggtacgacatctctcctg 85
||||||||||||||||||
Sbjct: 69 ggtacgacatctctcctg 86
>RF00730;mir-277;BAAB01014298.1/12021-12140 7091:Bombyx mori
(domestic silkworm)
Length = 120
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 50 actgtaaatgcactatctggtacgacatc 78
|||||||||||||||||||||||||||||
Sbjct: 75 actgtaaatgcactatctggtacgacatc 103
>RF00730;mir-277;AAZO01001184.1/8581-8481 121224:Pediculus humanus
corporis (human body louse)
Length = 101
Score = 54.0 bits (27), Expect = 3e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 51 ctgtaaatgcactatctggtacgacat 77
|||||||||||||||||||||||||||
Sbjct: 57 ctgtaaatgcactatctggtacgacat 83
>RF00730;mir-277;AAJJ01000475.1/30018-29916 7070:Tribolium
castaneum (red flour beetle)
Length = 103
Score = 54.0 bits (27), Expect = 3e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 46 gaatactgtaaatgcactatctggtacgaca 76
|||| ||||||||||||||||||||||||||
Sbjct: 54 gaattctgtaaatgcactatctggtacgaca 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 15 cgtgccagatgcgcgtttacac 36
||||||||||||||||||||||
Sbjct: 18 cgtgccagatgcgcgtttacac 39
>RF00730;mir-277;AAGE02012646.1/3549-3655 7159:Aedes aegypti
(yellow fever mosquito)
Length = 107
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 52 tgtaaatgcactatctggtacgacat 77
||||||||||||||||||||||||||
Sbjct: 64 tgtaaatgcactatctggtacgacat 89
>RF00730;mir-277;ABKP02013266.1/5414-5519 377271:Anopheles gambiae
M
Length = 106
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 52 tgtaaatgcactatctggtacgacat 77
||||||||||||||||||||||||||
Sbjct: 63 tgtaaatgcactatctggtacgacat 88
>RF00730;mir-277;AANI01014607.1/369382-369282 7244:Drosophila
virilis
Length = 101
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 52 tgtaaatgcactatctggtacgacat 77
||||||||||||||||||||||||||
Sbjct: 58 tgtaaatgcactatctggtacgacat 83
>RF00730;mir-277;ABLF01050542.1/1-88 7029:Acyrthosiphon pisum (pea
aphid)
Length = 88
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 52 tgtaaatgcactatctggtacgaca 76
|||||||||||||||||||||||||
Sbjct: 60 tgtaaatgcactatctggtacgaca 84
