miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00672;mir-190;AAZX01003157.1/32919-33003 7425:Nasonia
vitripennis (jewel wasp)
Length = 85
Score = 168 bits (85), Expect = 8e-42
Identities = 85/85 (100%)
Strand = Plus / Plus
Query: 10 cccagtatactgctagatatgtttgatattcttggttgtataataataacgaccaggaat 69
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cccagtatactgctagatatgtttgatattcttggttgtataataataacgaccaggaat 60
Query: 70 caaacatattattacagtgtctggt 94
|||||||||||||||||||||||||
Sbjct: 61 caaacatattattacagtgtctggt 85
>RF00672;mir-190;AADG05004972.1/16510-16597 7460:Apis mellifera
(honey bee)
Length = 88
Score = 61.9 bits (31), Expect = 1e-09
Identities = 55/62 (88%), Gaps = 2/62 (3%)
Strand = Plus / Plus
Query: 24 agatatgtttgatattcttggttgtataataa--taacgaccaggaatcaaacatattat 81
||||||||||||||||||||||||| | ||| | |||||||||||||||||||||||
Sbjct: 15 agatatgtttgatattcttggttgttttttaaagaatcgaccaggaatcaaacatattat 74
Query: 82 ta 83
||
Sbjct: 75 ta 76
>RF00672;mir-190;AAGH01005520.1/1141-1230 7240:Drosophila simulans
Length = 90
Score = 54.0 bits (27), Expect = 3e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 24 agatatgtttgatattcttggttgtat 50
|||||||||||||||||||||||||||
Sbjct: 15 agatatgtttgatattcttggttgtat 41
>RF00672;mir-190;AAJJ01000811.1/4671-4585 7070:Tribolium castaneum
(red flour beetle)
Length = 87
Score = 54.0 bits (27), Expect = 3e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 24 agatatgtttgatattcttggttgtat 50
|||||||||||||||||||||||||||
Sbjct: 15 agatatgtttgatattcttggttgtat 41
>RF00672;mir-190;AAZO01006982.1/10545-10459 121224:Pediculus
humanus corporis (human body louse)
Length = 87
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 24 agatatgtttgatattcttggttgt 48
|||||||||||||||||||||||||
Sbjct: 15 agatatgtttgatattcttggttgt 39
>RF00672;mir-190;ABLF01005497.1/9822-9738 7029:Acyrthosiphon pisum
(pea aphid)
Length = 85
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 24 agatatgtttgatattcttggttgt 48
|||||||||||||||||||||||||
Sbjct: 15 agatatgtttgatattcttggttgt 39
>RF00672;mir-190;BABH01038078.1/4948-5036 7091:Bombyx mori
(domestic silkworm)
Length = 89
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 24 agatatgtttgatattcttggttgt 48
|||||||||||||||||||||||||
Sbjct: 16 agatatgtttgatattcttggttgt 40
>RF00672;mir-190;AAGE02010108.1/2181-2091 7159:Aedes aegypti
(yellow fever mosquito)
Length = 91
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 24 agatatgtttgatattcttggttgt 48
|||||||||||||||||||||||||
Sbjct: 15 agatatgtttgatattcttggttgt 39
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 62 ccaggaatcaaacatattattac 84
|||||||||||||||||||||||
Sbjct: 58 ccaggaatcaaacatattattac 80
>RF00672;mir-190;AAAB01008807.1/2608463-2608553 180454:Anopheles
gambiae str. PEST
Length = 91
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 24 agatatgtttgatattcttggttgt 48
|||||||||||||||||||||||||
Sbjct: 15 agatatgtttgatattcttggttgt 39
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 62 ccaggaatcaaacatattattac 84
|||||||||||||||||||||||
Sbjct: 58 ccaggaatcaaacatattattac 80
>RF00672;mir-190;AAPU01011510.1/87170-87259 7230:Drosophila
mojavensis
Length = 90
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 24 agatatgtttgatattcttggttgt 48
|||||||||||||||||||||||||
Sbjct: 15 agatatgtttgatattcttggttgt 39
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 62 ccaggaatcaaacatattattac 84
|||||||||||||||||||||||
Sbjct: 57 ccaggaatcaaacatattattac 79
>RF00672;mir-190;ABJB010542931.1/4708-4623 6945:Ixodes scapularis
(black-legged tick)
Length = 86
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 24 agatatgtttgatattcttggttgt 48
|||||||||||||||||||||||||
Sbjct: 16 agatatgtttgatattcttggttgt 40
