miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00706;mir-263;AAZX01003415.1/15982-15890 7425:Nasonia
          vitripennis (jewel wasp)
          Length = 93

 Score =  161 bits (81), Expect = 2e-39
 Identities = 81/81 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  ctggcgggtcttggcactggaagaattcacagatgtgcggttgtgtgtaatcgtggatct 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7  ctggcgggtcttggcactggaagaattcacagatgtgcggttgtgtgtaatcgtggatct 66

                               
Query: 61 tgcaatgccattacccgctgg 81
          |||||||||||||||||||||
Sbjct: 67 tgcaatgccattacccgctgg 87




>RF00706;mir-263;AADG05001725.1/30704-30614 7460:Apis mellifera
          (honey bee)
          Length = 91

 Score = 97.6 bits (49), Expect = 2e-20
 Identities = 66/71 (92%), Gaps = 3/71 (4%)
 Strand = Plus / Plus

                                                                      
Query: 1  ctggcgggtcttggcactggaagaattcacagatgtgcggttgtgtgtaatcgtggatct 60
          ||||||||||||||||||||||||||||||||||||||    |||| |||||||||||||
Sbjct: 7  ctggcgggtcttggcactggaagaattcacagatgtgc---agtgtataatcgtggatct 63

                     
Query: 61 tgcaatgccat 71
          |||||||||||
Sbjct: 64 tgcaatgccat 74




>RF00706;mir-263;AAZO01001458.1/4323-4412 121224:Pediculus humanus
          corporis (human body louse)
          Length = 90

 Score = 50.1 bits (25), Expect = 4e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 10 cttggcactggaagaattcacagat 34
          |||||||||||||||||||||||||
Sbjct: 16 cttggcactggaagaattcacagat 40




>RF00706;mir-263;ABLF01012668.1/9002-8913 7029:Acyrthosiphon pisum
          (pea aphid)
          Length = 90

 Score = 50.1 bits (25), Expect = 4e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 9  tcttggcactggaagaattcacaga 33
          |||||||||||||||||||||||||
Sbjct: 15 tcttggcactggaagaattcacaga 39




>RF00706;mir-263;AAJJ01000084.1/138042-137956 7070:Tribolium
          castaneum (red flour beetle)
          Length = 87

 Score = 50.1 bits (25), Expect = 4e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 10 cttggcactggaagaattcacagat 34
          |||||||||||||||||||||||||
Sbjct: 16 cttggcactggaagaattcacagat 40




>RF00706;mir-263;ABJB010787234.1/6330-6423 6945:Ixodes scapularis
          (black-legged tick)
          Length = 94

 Score = 44.1 bits (22), Expect = 3e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 10 cttggcactggaagaattcacagatg 35
          |||||||||| |||||||||||||||
Sbjct: 16 cttggcactgaaagaattcacagatg 41