miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00727;bantam;AAJJ01000881.1/39195-39283 7070:Tribolium
castaneum (red flour beetle)
Length = 89
Score = 161 bits (81), Expect = 2e-39
Identities = 81/81 (100%)
Strand = Plus / Plus
Query: 1 tcagcgagacgaaactggttttcacagtgatttgacagatatatttgattctgagatcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcagcgagacgaaactggttttcacagtgatttgacagatatatttgattctgagatcat 60
Query: 61 tgtgaaagctgattttgttca 81
|||||||||||||||||||||
Sbjct: 61 tgtgaaagctgattttgttca 81
>RF00727;bantam;AAZX01004974.1/17134-17222 7425:Nasonia
vitripennis (jewel wasp)
Length = 89
Score = 131 bits (66), Expect = 1e-30
Identities = 72/74 (97%)
Strand = Plus / Plus
Query: 7 agacgaaactggttttcacagtgatttgacagatatatttgattctgagatcattgtgaa 66
|||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||
Sbjct: 7 agacgaaactggttttcacaatgatttgacagatgtatttgattctgagatcattgtgaa 66
Query: 67 agctgattttgttc 80
||||||||||||||
Sbjct: 67 agctgattttgttc 80
>RF00727;bantam;AADG05005002.1/2155-2243 7460:Apis mellifera
(honey bee)
Length = 89
Score = 117 bits (59), Expect = 2e-26
Identities = 68/71 (95%)
Strand = Plus / Plus
Query: 9 acgaaactggttttcacagtgatttgacagatatatttgattctgagatcattgtgaaag 68
|||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 9 acgaaactggttttcacaatgatttgacagatagattcgattctgagatcattgtgaaag 68
Query: 69 ctgattttgtt 79
|||||||||||
Sbjct: 69 ctgattttgtt 79
>RF00727;bantam;AAZO01005717.1/66950-67042 121224:Pediculus
humanus corporis (human body louse)
Length = 93
Score = 85.7 bits (43), Expect = 8e-17
Identities = 68/74 (91%), Gaps = 3/74 (4%)
Strand = Plus / Plus
Query: 9 acgaaactggttttcacagtgatttgacagata-tatttg--attctgagatcattgtga 65
|||||||||||||||||| ||||||| |||||| | |||| ||||||||||||||||||
Sbjct: 9 acgaaactggttttcacaatgatttgccagatagtttttgttattctgagatcattgtga 68
Query: 66 aagctgattttgtt 79
||||||||||||||
Sbjct: 69 aagctgattttgtt 82
>RF00727;bantam;AADK01008828.1/6468-6379 7091:Bombyx mori
(domestic silkworm)
Length = 90
Score = 81.8 bits (41), Expect = 1e-15
Identities = 66/73 (90%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 9 acgaaactggttttcacagtgatttgacagatatatttg-attctgagatcattgtgaaa 67
|||||||||||||||| | ||||||||||||| |||| ||||||||||||||||||||
Sbjct: 9 acgaaactggttttcataatgatttgacagattgttttgtattctgagatcattgtgaaa 68
Query: 68 gctgattttgttc 80
||| |||||||||
Sbjct: 69 gctaattttgttc 81
>RF00727;bantam;AASC02061937.1/7510-7417 6500:Aplysia californica
(California sea hare)
Length = 94
Score = 60.0 bits (30), Expect = 4e-09
Identities = 61/71 (85%), Gaps = 4/71 (5%)
Strand = Plus / Plus
Query: 12 aaactggttttcacagtgatttgacagatatattt----gattctgagatcattgtgaaa 67
||||||||||||||||||||||| |||||| ||| | ||||||||||||||||||
Sbjct: 12 aaactggttttcacagtgatttgccagataattttaacaaaatctgagatcattgtgaaa 71
Query: 68 gctgattttgt 78
||||||||||
Sbjct: 72 actgattttgt 82
>RF00727;bantam;ABJB010305858.1/1270-1184 6945:Ixodes scapularis
(black-legged tick)
Length = 87
Score = 60.0 bits (30), Expect = 4e-09
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 50 tctgagatcattgtgaaagctgattttgtt 79
||||||||||||||||||||||||||||||
Sbjct: 51 tctgagatcattgtgaaagctgattttgtt 80
>RF00727;bantam;ABLF01005214.1/5435-5342 7029:Acyrthosiphon pisum
(pea aphid)
Length = 94
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 48 attctgagatcattgtgaaagctgattt 75
||||||||||||||||||||||| ||||
Sbjct: 53 attctgagatcattgtgaaagctaattt 80
>RF00728;mir-81;AAQA01000482.1/18100-18000 6279:Brugia malayi
Length = 101
Score = 46.1 bits (23), Expect = 7e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 44 tttgattctgagatcattgtgaaagct 70
||||| |||||||||||||||||||||
Sbjct: 55 tttgagtctgagatcattgtgaaagct 81
>RF00727;bantam;AAWU01005949.1/119500-119406 7176:Culex
quinquefasciatus (southern house mosquito)
Length = 95
Score = 46.1 bits (23), Expect = 7e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 52 tgagatcattgtgaaagctgattttgt 78
|||||||||| ||||||||||||||||
Sbjct: 56 tgagatcattttgaaagctgattttgt 82
>RF00727;bantam;AAGE02003301.1/208408-208314 7159:Aedes aegypti
(yellow fever mosquito)
Length = 95
Score = 46.1 bits (23), Expect = 7e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 52 tgagatcattgtgaaagctgattttgt 78
|||||||||| ||||||||||||||||
Sbjct: 57 tgagatcattttgaaagctgattttgt 83
>RF00727;bantam;AAPU01011505.1/2277-2366 7230:Drosophila
mojavensis
Length = 90
Score = 46.1 bits (23), Expect = 7e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 52 tgagatcattgtgaaagctgattttgt 78
|||||||||| ||||||||||||||||
Sbjct: 53 tgagatcattttgaaagctgattttgt 79
>RF00727;bantam;AANI01017339.1/10975-11064 7244:Drosophila virilis
Length = 90
Score = 46.1 bits (23), Expect = 7e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 52 tgagatcattgtgaaagctgattttgt 78
|||||||||| ||||||||||||||||
Sbjct: 52 tgagatcattttgaaagctgattttgt 78
