miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00813;mir-11;AAJJ01003245.1/4924-4995 7070:Tribolium castaneum
(red flour beetle)
Length = 72
Score = 143 bits (72), Expect = 5e-34
Identities = 72/72 (100%)
Strand = Plus / Plus
Query: 19 atgcattctgggattctgactgtgacctgtgtgtgtctgattcacatcacaggcagagtt 78
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgcattctgggattctgactgtgacctgtgtgtgtctgattcacatcacaggcagagtt 60
Query: 79 ctagctatgcgt 90
||||||||||||
Sbjct: 61 ctagctatgcgt 72
>RF00813;mir-11;AAZX01002631.1/4523-4598 7425:Nasonia vitripennis
(jewel wasp)
Length = 76
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 60 tcacatcacaggcagagttctag 82
|||||||||||||||||||||||
Sbjct: 46 tcacatcacaggcagagttctag 68
>RF00813;mir-11;AADG05003579.1/1945-1866 7460:Apis mellifera
(honey bee)
Length = 80
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 60 tcacatcacaggcagagttctag 82
|||||||||||||||||||||||
Sbjct: 50 tcacatcacaggcagagttctag 72
>RF00813;mir-11;BABH01023789.1/1064-1134 7091:Bombyx mori
(domestic silkworm)
Length = 71
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 60 tcacatcacaggcagagttctagcta 85
||||||||||| ||||||||||||||
Sbjct: 41 tcacatcacagtcagagttctagcta 66
