miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00047;mir-2;AAJJ01001714.1/2527-2594 7070:Tribolium castaneum
(red flour beetle)
Length = 68
Score = 135 bits (68), Expect = 8e-32
Identities = 68/68 (100%)
Strand = Plus / Plus
Query: 4 cctatcagtcaatttggttgtgaaacctagtatttattcgggtatcacagccattttgac 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cctatcagtcaatttggttgtgaaacctagtatttattcgggtatcacagccattttgac 60
Query: 64 gagtttgg 71
||||||||
Sbjct: 61 gagtttgg 68
>RF00047;mir-2;AAPP01016552.1/52617-52684 7217:Drosophila
ananassae
Length = 68
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 46 tatcacagccattttgacgagtttgg 71
||||||||||||||||||||||||||
Sbjct: 43 tatcacagccattttgacgagtttgg 68
>RF00047;mir-2;AAQB01008610.1/296699-296630 7260:Drosophila
willistoni
Length = 70
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 46 tatcacagccattttgacgagtttgg 71
||||||||||||||||||||||||||
Sbjct: 45 tatcacagccattttgacgagtttgg 70
>RF00047;mir-2;AAIZ01000548.1/11193-11126 7234:Drosophila
persimilis
Length = 68
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 46 tatcacagccattttgacgagtttgg 71
||||||||||||||||||||||||||
Sbjct: 43 tatcacagccattttgacgagtttgg 68
>RF00047;mir-2;AASW01010650.1/86-152 7240:Drosophila simulans
Length = 67
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 46 tatcacagccattttgacgagtttgg 71
||||||||||||||||||||||||||
Sbjct: 42 tatcacagccattttgacgagtttgg 67
>RF00047;mir-2;AANI01017189.1/98316-98382 7244:Drosophila virilis
Length = 67
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 46 tatcacagccattttgacgagtttgg 71
||||||||||||||||||||||||||
Sbjct: 42 tatcacagccattttgacgagtttgg 67
>RF00047;mir-2;AAWU01020422.1/10782-10706 7176:Culex
quinquefasciatus (southern house mosquito)
Length = 77
Score = 50.1 bits (25), Expect = 4e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 46 tatcacagccattttgacgagtttg 70
|||||||||||||||||||||||||
Sbjct: 52 tatcacagccattttgacgagtttg 76
>RF00047;mir-2;AAAB01008807.1/11606679-11606749 180454:Anopheles
gambiae str. PEST
Length = 71
Score = 50.1 bits (25), Expect = 4e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 46 tatcacagccattttgacgagtttg 70
|||||||||||||||||||||||||
Sbjct: 46 tatcacagccattttgacgagtttg 70
>RF00047;mir-2;AAIZ01004769.1/8926-8993 7234:Drosophila persimilis
Length = 68
Score = 50.1 bits (25), Expect = 4e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 46 tatcacagccattttgacgagtttg 70
|||||||||||||||||||||||||
Sbjct: 43 tatcacagccattttgacgagtttg 67
>RF00047;mir-2;AAKO01003387.1/9775-9842 7238:Drosophila sechellia
Length = 68
Score = 50.1 bits (25), Expect = 4e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 46 tatcacagccattttgacgagtttg 70
|||||||||||||||||||||||||
Sbjct: 43 tatcacagccattttgacgagtttg 67
>RF00047;mir-2;AAPU01009688.1/35644-35576 7230:Drosophila
mojavensis
Length = 69
Score = 50.1 bits (25), Expect = 4e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 46 tatcacagccattttgacgagtttg 70
|||||||||||||||||||||||||
Sbjct: 44 tatcacagccattttgacgagtttg 68
>RF00047;mir-2;AANI01016575.1/52926-52998 7244:Drosophila virilis
Length = 73
Score = 50.1 bits (25), Expect = 4e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 46 tatcacagccattttgacgagtttg 70
|||||||||||||||||||||||||
Sbjct: 48 tatcacagccattttgacgagtttg 72
>RF00047;mir-2;AAGE02012793.1/17697-17627 7159:Aedes aegypti
(yellow fever mosquito)
Length = 71
Score = 46.1 bits (23), Expect = 6e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 46 tatcacagccattttgacgagtt 68
|||||||||||||||||||||||
Sbjct: 46 tatcacagccattttgacgagtt 68
>RF00047;mir-2;AAQB01006881.1/26688-26760 7260:Drosophila
willistoni
Length = 73
Score = 46.1 bits (23), Expect = 6e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 46 tatcacagccattttgacgagtt 68
|||||||||||||||||||||||
Sbjct: 48 tatcacagccattttgacgagtt 70
