miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00637;mir-276;AAJJ01000143.1/58311-58223 7070:Tribolium
castaneum (red flour beetle)
Length = 89
Score = 141 bits (71), Expect = 1e-33
Identities = 71/71 (100%)
Strand = Plus / Plus
Query: 1 tagaccactagcgaggtatagagttcctacgtgatttttcggctgtaggaacttcatacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 tagaccactagcgaggtatagagttcctacgtgatttttcggctgtaggaacttcatacc 65
Query: 61 gtgctcttgga 71
|||||||||||
Sbjct: 66 gtgctcttgga 76
>RF00637;mir-276;AAZO01003220.1/6657-6747 121224:Pediculus humanus
corporis (human body louse)
Length = 91
Score = 75.8 bits (38), Expect = 6e-14
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 10 agcgaggtatagagttcctacgtgatttttcggctgtaggaacttcataccgtgctcttg 69
|||||||||||||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 17 agcgaggtatagagttcctacgtgctttggttactgtaggaacttcataccgtgctcttg 76
Query: 70 ga 71
||
Sbjct: 77 ga 78
>RF00637;mir-276;AADK01021256.1/890-979 7091:Bombyx mori (domestic
silkworm)
Length = 90
Score = 69.9 bits (35), Expect = 4e-12
Identities = 60/67 (89%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 4 accactagcgaggtatagagttcctacgtgatttttcggctgtaggaacttcataccgtg 63
||||||||||||||||||||||||||||| || | |||||||||||||||||||||
Sbjct: 11 accactagcgaggtatagagttcctacgt-atgctaacactgtaggaacttcataccgtg 69
Query: 64 ctcttgg 70
|||||||
Sbjct: 70 ctcttgg 76
>RF00637;mir-276;ABLF01003513.1/4658-4754 7029:Acyrthosiphon pisum
(pea aphid)
Length = 97
Score = 60.0 bits (30), Expect = 4e-09
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 3 gaccactagcgaggtatagagttcctacgt 32
||||||||||||||||||||||||||||||
Sbjct: 9 gaccactagcgaggtatagagttcctacgt 38
Score = 54.0 bits (27), Expect = 2e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 45 gtaggaacttcataccgtgctcttgga 71
|||||||||||||||||||||||||||
Sbjct: 59 gtaggaacttcataccgtgctcttgga 85
>RF00637;mir-276;AAZX01001999.1/5300-5391 7425:Nasonia vitripennis
(jewel wasp)
Length = 92
Score = 60.0 bits (30), Expect = 4e-09
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 10 agcgaggtatagagttcctacgtgatttttcggctgtaggaacttcataccgtgctcttg 69
||||||||||||||||||||||| ||| | |||||||||||||||||||||||||
Sbjct: 18 agcgaggtatagagttcctacgtagatttcagaaagtaggaacttcataccgtgctcttg 77
Query: 70 ga 71
||
Sbjct: 78 ga 79
>RF00637;mir-276;AADG05002822.1/76702-76793 7460:Apis mellifera
(honey bee)
Length = 92
Score = 60.0 bits (30), Expect = 4e-09
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 10 agcgaggtatagagttcctacgtgatttttcggctgtaggaacttcataccgtgctcttg 69
||||||||||||||||||||||| | || | |||||||||||||||||||||||||
Sbjct: 18 agcgaggtatagagttcctacgtagtgttcagaaagtaggaacttcataccgtgctcttg 77
Query: 70 ga 71
||
Sbjct: 78 ga 79
>RF00637;mir-276;ABKQ02021477.1/23012-22918 377270:Anopheles
gambiae S
Length = 95
Score = 56.0 bits (28), Expect = 6e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 44 tgtaggaacttcataccgtgctcttgga 71
||||||||||||||||||||||||||||
Sbjct: 56 tgtaggaacttcataccgtgctcttgga 83
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 agcgaggtatagagttcctacg 31
||||||||||||||||||||||
Sbjct: 17 agcgaggtatagagttcctacg 38
>RF00637;mir-276;AANI01017424.1/110847-110939 7244:Drosophila
virilis
Length = 93
Score = 54.0 bits (27), Expect = 2e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 45 gtaggaacttcataccgtgctcttgga 71
|||||||||||||||||||||||||||
Sbjct: 55 gtaggaacttcataccgtgctcttgga 81
>RF00637;mir-276;AAWU01010561.1/6178-6274 7176:Culex
quinquefasciatus (southern house mosquito)
Length = 97
Score = 52.0 bits (26), Expect = 9e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 46 taggaacttcataccgtgctcttgga 71
||||||||||||||||||||||||||
Sbjct: 60 taggaacttcataccgtgctcttgga 85
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 ctagcgaggtatagagttccta 29
||||||||||||||||||||||
Sbjct: 14 ctagcgaggtatagagttccta 35
>RF00637;mir-276;AAGE02007617.1/38970-39063 7159:Aedes aegypti
(yellow fever mosquito)
Length = 94
Score = 52.0 bits (26), Expect = 9e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 45 gtaggaacttcataccgtgctcttgg 70
||||||||||||||||||||||||||
Sbjct: 56 gtaggaacttcataccgtgctcttgg 81
Score = 46.1 bits (23), Expect = 6e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 agcgaggtatagagttcctacgt 32
|||||||||||||||||||||||
Sbjct: 17 agcgaggtatagagttcctacgt 39
>RF00637;mir-276;AAGE02000417.1/11129-11035 7159:Aedes aegypti
(yellow fever mosquito)
Length = 95
Score = 52.0 bits (26), Expect = 9e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 46 taggaacttcataccgtgctcttgga 71
||||||||||||||||||||||||||
Sbjct: 58 taggaacttcataccgtgctcttgga 83
>RF00637;mir-276;ABKP02026752.1/53325-53226 377271:Anopheles
gambiae M
Length = 100
Score = 52.0 bits (26), Expect = 9e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 46 taggaacttcataccgtgctcttgga 71
||||||||||||||||||||||||||
Sbjct: 63 taggaacttcataccgtgctcttgga 88
Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 5 ccactagcgaggtatagagttccta 29
|||| ||||||||||||||||||||
Sbjct: 11 ccaccagcgaggtatagagttccta 35
>RF00637;mir-276;ABKQ02021479.1/6963-6864 377270:Anopheles gambiae
S
Length = 100
Score = 52.0 bits (26), Expect = 9e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 46 taggaacttcataccgtgctcttgga 71
||||||||||||||||||||||||||
Sbjct: 63 taggaacttcataccgtgctcttgga 88
Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 5 ccactagcgaggtatagagttccta 29
|||| ||||||||||||||||||||
Sbjct: 11 ccaccagcgaggtatagagttccta 35
>RF00637;mir-276;AADE01001409.1/12453-12359 46245:Drosophila
pseudoobscura pseudoobscura
Length = 95
Score = 48.1 bits (24), Expect = 1e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 agcgaggtatagagttcctacgtg 33
||||||||||||||||||||||||
Sbjct: 19 agcgaggtatagagttcctacgtg 42
Score = 46.1 bits (23), Expect = 6e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 45 gtaggaacttcataccgtgctcttgga 71
|||||||||| ||||||||||||||||
Sbjct: 57 gtaggaacttaataccgtgctcttgga 83
>RF00637;mir-276;AAPU01011641.1/29322-29227 7230:Drosophila
mojavensis
Length = 96
Score = 48.1 bits (24), Expect = 1e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 agcgaggtatagagttcctacgtg 33
||||||||||||||||||||||||
Sbjct: 19 agcgaggtatagagttcctacgtg 42
Score = 46.1 bits (23), Expect = 6e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 45 gtaggaacttcataccgtgctcttgga 71
|||||||||| ||||||||||||||||
Sbjct: 58 gtaggaacttaataccgtgctcttgga 84
>RF00637;mir-276;AE014296.4/10312890-10312983 7227:Drosophila
melanogaster (fruit fly)
Length = 94
Score = 46.1 bits (23), Expect = 6e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 agcgaggtatagagttcctacgt 32
|||||||||||||||||||||||
Sbjct: 19 agcgaggtatagagttcctacgt 41
Score = 46.1 bits (23), Expect = 6e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 45 gtaggaacttcataccgtgctcttgga 71
|||||||||| ||||||||||||||||
Sbjct: 56 gtaggaacttaataccgtgctcttgga 82
