miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00724;mir-282;AAJJ01000207.1/45613-45525 7070:Tribolium
castaneum (red flour beetle)
Length = 89
Score = 145 bits (73), Expect = 8e-35
Identities = 73/73 (100%)
Strand = Plus / Plus
Query: 1 tgtagaggtagcctctcctaggctttgtctgtgaatttggccgagacatagcctgattga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 tgtagaggtagcctctcctaggctttgtctgtgaatttggccgagacatagcctgattga 68
Query: 61 ggctaactttagc 73
|||||||||||||
Sbjct: 69 ggctaactttagc 81
>RF00724;mir-282;AAZX01009495.1/283-193 7425:Nasonia vitripennis
(jewel wasp)
Length = 91
Score = 48.1 bits (24), Expect = 1e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 9 tagcctctcctaggctttgtctgt 32
||||||||||||||||||||||||
Sbjct: 17 tagcctctcctaggctttgtctgt 40
>RF00724;mir-282;AADG05005052.1/100558-100468 7460:Apis mellifera
(honey bee)
Length = 91
Score = 48.1 bits (24), Expect = 1e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 9 tagcctctcctaggctttgtctgt 32
||||||||||||||||||||||||
Sbjct: 17 tagcctctcctaggctttgtctgt 40
>RF00724;mir-282;AAGE02015805.1/19430-19533 7159:Aedes aegypti
(yellow fever mosquito)
Length = 104
Score = 48.1 bits (24), Expect = 1e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 9 tagcctctcctaggctttgtctgt 32
||||||||||||||||||||||||
Sbjct: 17 tagcctctcctaggctttgtctgt 40
>RF00724;mir-282;AAQB01009652.1/11236-11325 7260:Drosophila
willistoni
Length = 90
Score = 48.1 bits (24), Expect = 1e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 9 tagcctctcctaggctttgtctgtgaatttgg 40
|||||||| |||||||||||||||| ||||||
Sbjct: 17 tagcctctactaggctttgtctgtgcatttgg 48
>RF00724;mir-282;AAPU01011488.1/130621-130527 7230:Drosophila
mojavensis
Length = 95
Score = 46.1 bits (23), Expect = 6e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 9 tagcctctcctaggctttgtctgtgaatttg 39
|||||||| |||||||||||||||| |||||
Sbjct: 17 tagcctctactaggctttgtctgtgcatttg 47
>RF00724;mir-282;AE014296.4/3251022-3251116 7227:Drosophila
melanogaster (fruit fly)
Length = 95
Score = 42.1 bits (21), Expect = 0.001
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 9 tagcctctcctaggctttgtctgtg 33
|||||||| ||||||||||||||||
Sbjct: 17 tagcctctactaggctttgtctgtg 41
>RF00724;mir-282;AAPT01020493.1/70677-70773 7222:Drosophila
grimshawi
Length = 97
Score = 42.1 bits (21), Expect = 0.001
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 9 tagcctctcctaggctttgtctgtg 33
|||||||| ||||||||||||||||
Sbjct: 17 tagcctctactaggctttgtctgtg 41
